Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p11320 Brassica napus HOM05D003513 ORTHO05D004660 7.2e-44 180.3 96 100.0
A10p16400 Brassica napus HOM05D003513 ORTHO05D004660 7.2e-44 180.3 96 100.0
C06p15560 Brassica napus HOM05D003513 ORTHO05D004660 7.2e-44 180.3 96 100.0
C08p23080 Brassica napus HOM05D003513 ORTHO05D004660 7.2e-44 180.3 96 100.0
C06p18710 Brassica napus HOM05D003513 ORTHO05D004660 1.5e-36 156.0 103 83.5
A09p29610 Brassica napus HOM05D003513 ORTHO05D004660 4.4e-33 144.4 87 90.8
BraA09t38150Z Brassica rapa HOM05D003513 ORTHO05D004660 1.1e-23 113.2 68 89.7
Aa31LG8G12720 Aethionema arabicum HOM05D003513 ORTHO05D004660 3.2e-23 111.7 58 96.6
AT4G33690 Arabidopsis thaliana HOM05D003513 ORTHO05D004660 3.2e-23 111.7 58 96.6
A04p04130 Brassica napus HOM05D003513 ORTHO05D004660 3.2e-23 111.7 68 88.2
Carub.0007s0673 Capsella rubella HOM05D003513 ORTHO05D004660 3.2e-23 111.7 61 93.4
BcaC08g44431 Brassica carinata HOM05D003513 ORTHO05D013524 4.1e-23 111.3 68 86.8
A03p35030 Brassica napus HOM05D003513 ORTHO05D004660 7.1e-23 110.5 60 93.3
A03p66860 Brassica napus HOM05D003513 ORTHO05D004660 7.1e-23 110.5 58 94.8
C03p42610 Brassica napus HOM05D003513 ORTHO05D004660 7.1e-23 110.5 58 96.6
AL7G17790 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 9.2e-23 110.2 58 94.8
BcaC09g52179 Brassica carinata HOM05D003513 ORTHO05D004660 9.2e-23 110.2 58 94.8
A01p04630 Brassica napus HOM05D003513 ORTHO05D004660 9.2e-23 110.2 58 94.8
C01p05020 Brassica napus HOM05D003513 ORTHO05D004660 9.2e-23 110.2 58 94.8
BolC1t00484H Brassica oleracea HOM05D003513 ORTHO05D004660 9.2e-23 110.2 58 94.8
BraA01t00446Z Brassica rapa HOM05D003513 ORTHO05D004660 9.2e-23 110.2 58 94.8
Sp3g05980 Schrenkiella parvula HOM05D003513 ORTHO05D004660 1.2e-22 109.8 58 94.8
A09p33590 Brassica napus HOM05D003513 ORTHO05D004660 1.6e-22 109.4 56 100.0
A03p61430 Brassica napus HOM05D003513 ORTHO05D004660 4.6e-22 107.8 56 98.2
BraA01t02793Z Brassica rapa HOM05D004336 ORTHO05D004660 6.0e-22 107.5 59 91.5
Sp7g31420 Schrenkiella parvula HOM05D003513 ORTHO05D004660 6.0e-22 107.5 56 96.4
THA.LOC104807196 Tarenaya hassleriana HOM05D003513 ORTHO05D004660 6.0e-22 107.5 63 84.1
BcaC04g20358 Brassica carinata HOM05D003513 ORTHO05D004660 1.0e-21 106.7 58 93.1
BcaB07g32937 Brassica carinata HOM05D003513 ORTHO05D004660 1.3e-21 106.3 62 90.3
BcaB02g10961 Brassica carinata HOM05D003513 ORTHO05D004660 2.3e-21 105.5 62 90.3
BolC3t16531H Brassica oleracea HOM05D003513 ORTHO05D004660 2.3e-21 105.5 60 93.3
BraA03t15374Z Brassica rapa HOM05D003513 ORTHO05D004660 2.3e-21 105.5 68 83.8
BraA03t12683Z Brassica rapa HOM05D003513 ORTHO05D004660 6.6e-21 104.0 60 90.0
A05p21550 Brassica napus HOM05D003513 ORTHO05D004660 8.6e-21 103.6 56 94.6
BraA05t21075Z Brassica rapa HOM05D003513 ORTHO05D004660 8.6e-21 103.6 56 94.6
Carub.0003s2847 Capsella rubella HOM05D003513 ORTHO05D004660 1.5e-20 102.8 58 93.1
AL3G45960 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 1.6e-19 99.4 58 84.5
Ca_00197_v3 Cicer arietinum L. HOM05D000871 ORTHO05D000770 4.7e-19 97.8 63 74.6
Lj6g0027000 Lotus japonicus HOM05D003513 ORTHO05D004660 4.7e-19 97.8 63 76.2
Lj6g0027758 Lotus japonicus HOM05D003513 ORTHO05D004660 4.7e-19 97.8 63 76.2
ClCG02G003790 Citrullus lanatus HOM05D003513 ORTHO05D004660 6.2e-19 97.4 63 77.8
MELO3C013317.2 Cucumis melo HOM05D003513 ORTHO05D004660 6.2e-19 97.4 63 77.8
CsaV3_7G001360 Cucumis sativus L. HOM05D003513 ORTHO05D004660 6.2e-19 97.4 63 77.8
Psat1g212080 Pisum sativum HOM05D003513 ORTHO05D004660 6.2e-19 97.4 63 76.2
DCAR_029853 Daucus carota HOM05D003513 ORTHO05D004660 8.1e-19 97.1 63 74.6
Dinv03362 Davidia involucrata HOM05D003513 ORTHO05D004660 8.1e-19 97.1 63 76.2
Manes.07G049900 Manihot esculenta HOM05D003513 ORTHO05D004660 8.1e-19 97.1 63 76.2
vmacro01922 Vaccinium macrocarpon HOM05D003513 ORTHO05D004660 8.1e-19 97.1 63 76.2
BraA05t21192Z Brassica rapa HOM05D003513 ORTHO05D004660 1.1e-18 96.7 64 81.2
Potri.001G287900 Populus trichocarpa HOM05D003513 ORTHO05D004660 1.1e-18 96.7 79 63.3
Lj9A339T51 Lonicera japonica HOM05D003513 ORTHO05D004660 1.4e-18 96.3 58 81.0
GSVIVG01036987001 Vitis vinifera HOM05D003513 ORTHO05D004660 1.4e-18 96.3 63 74.6
C01p31670 Brassica napus HOM05D003513 ORTHO05D015800 1.8e-18 95.9 54 90.7
Cc02_g20350 Coffea canephora HOM05D003513 ORTHO05D004660 1.8e-18 95.9 58 82.8
Lj1g0004946 Lotus japonicus HOM05D003513 ORTHO05D004660 1.8e-18 95.9 63 74.6
Medtr2g010510 Medicago truncatula HOM05D003513 ORTHO05D004660 1.8e-18 95.9 63 74.6
CiPaw.16G055200 Carya illinoinensis HOM05D003513 ORTHO05D004660 2.3e-18 95.5 63 74.6
Oeu059873.1 Olea europaea HOM05D003513 ORTHO05D004660 2.3e-18 95.5 63 74.6
ECA236G2279 Erigeron canadensis HOM05D003513 ORTHO05D004660 4.0e-18 94.7 63 74.6
Hma1.2p1_0661F.1_g197860 Hydrangea macrophylla HOM05D003513 ORTHO05D004660 4.0e-18 94.7 63 74.6
Aqoxy5G03939 Aquilegia oxysepala HOM05D003513 ORTHO05D004660 5.2e-18 94.4 58 81.0
A05p23280 Brassica napus HOM05D003513 ORTHO05D004660 5.2e-18 94.4 50 98.0
Oeu010478.1 Olea europaea HOM05D003513 ORTHO05D004660 5.2e-18 94.4 63 73.0
TWI23G0398 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 5.2e-18 94.4 58 79.3
MD05G1110900 Malus domestica HOM05D003513 ORTHO05D004660 6.8e-18 94.0 63 73.0
arahy.Tifrunner.gnm1.ann1.C4ZNB5 Arachis hypogaea HOM05D003513 ORTHO05D004660 8.9e-18 93.6 63 73.0
arahy.Tifrunner.gnm1.ann1.SQB86K Arachis hypogaea HOM05D003513 ORTHO05D004660 8.9e-18 93.6 63 73.0
Cfa004752 Carpinus fangiana HOM05D003513 ORTHO05D004660 8.9e-18 93.6 63 73.0
COL.COLO4_17824 Corchorus olitorius HOM05D003513 ORTHO05D004660 8.9e-18 93.6 63 71.4
Duzib052G1139 Durio zibethinus HOM05D003513 ORTHO05D004660 8.9e-18 93.6 63 71.4
Thecc.02G033900 Theobroma cacao HOM05D003513 ORTHO05D004660 8.9e-18 93.6 63 71.4
TWI14G0477 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 8.9e-18 93.6 58 77.6
arahy.Tifrunner.gnm1.ann1.2E8PRH Arachis hypogaea HOM05D003513 ORTHO05D004660 1.2e-17 93.2 63 73.0
arahy.Tifrunner.gnm1.ann1.K4QFJX Arachis hypogaea HOM05D003513 ORTHO05D004660 1.2e-17 93.2 63 73.0
CSS0016653 Camellia sinensis var. sinensis HOM05D003513 ORTHO05D004660 1.2e-17 93.2 63 71.4
Cpa.g.sc20.72 Carica papaya HOM05D003513 ORTHO05D004660 1.2e-17 93.2 63 73.0
CiPaw.05G024600 Carya illinoinensis HOM05D003513 ORTHO05D004660 1.2e-17 93.2 63 71.4
Glyma.15G062000 Glycine max HOM05D003513 ORTHO05D004660 1.2e-17 93.2 63 71.4
Gohir.A03G213100 Gossypium hirsutum HOM05D003513 ORTHO05D004660 1.2e-17 93.2 63 71.4
Gohir.D02G234600 Gossypium hirsutum HOM05D003513 ORTHO05D004660 1.2e-17 93.2 63 71.4
Gorai.005G262600 Gossypium raimondii HOM05D003513 ORTHO05D004660 1.2e-17 93.2 63 71.4
PGR042G0778 Punica granatum HOM05D003513 ORTHO05D004660 1.2e-17 93.2 64 70.3
Actinidia02426 Actinidia chinensis HOM05D003513 ORTHO05D004660 1.5e-17 92.8 63 71.4
Lsat_1_v5_gn_7_84220 Lactuca sativa HOM05D003513 ORTHO05D004660 1.5e-17 92.8 79 63.3
Prupe.8G155900 Prunus persica HOM05D003513 ORTHO05D004660 1.5e-17 92.8 63 71.4
Solyc01g106560.4 Solanum lycopersicum HOM05D003513 ORTHO05D004660 1.5e-17 92.8 69 68.1
Atru.chr4.2879 Acer truncatum HOM05D003513 ORTHO05D004660 2.0e-17 92.4 63 71.4
Atru.chr5.2163 Acer truncatum HOM05D003513 ORTHO05D004660 2.0e-17 92.4 63 73.0
FAN20G2897 Fragaria x ananassa HOM05D003513 ORTHO05D004660 2.0e-17 92.4 63 69.8
Sed0007617 Sechium edule HOM05D003513 ORTHO05D004660 2.0e-17 92.4 63 73.0
Sopen01g048910 Solanum pennellii HOM05D003513 ORTHO05D004660 2.0e-17 92.4 63 71.4
PGSC0003DMG400005104 Solanum tuberosum HOM05D003513 ORTHO05D004660 2.0e-17 92.4 63 71.4
Cfa003376 Carpinus fangiana HOM05D003513 ORTHO05D004660 2.6e-17 92.0 63 71.4
PSO384G0236 Papaver somniferum HOM05D003513 ORTHO05D004660 2.6e-17 92.0 58 79.3
Actinidia00338 Actinidia chinensis HOM05D003513 ORTHO05D004660 3.4e-17 91.7 63 71.4
Eucgr.I02512 Eucalyptus grandis HOM05D003513 ORTHO05D004660 3.4e-17 91.7 63 73.0
PSO339G4304 Papaver somniferum HOM05D003513 ORTHO05D004660 3.4e-17 91.7 58 79.3
Rhsim11G0147300 Rhododendron simsii HOM05D003513 ORTHO05D004660 3.4e-17 91.7 56 80.4
Sabra09G0063800 Salix brachista HOM05D003513 ORTHO05D004660 3.4e-17 91.7 58 75.9
TAR375G0591 Trochodendron aralioides HOM05D003513 ORTHO05D004660 3.4e-17 91.7 58 77.6
Ciclev10028868m.g Citrus clementina HOM05D003513 ORTHO05D004660 4.4e-17 91.3 58 75.9
Glyma.13G253000 Glycine max HOM05D003513 ORTHO05D004660 4.4e-17 91.3 63 69.8
Peaxi162Scf00016g03328 Petunia axillaris HOM05D003513 ORTHO05D004660 4.4e-17 91.3 56 82.1
RcHm_v2.0_Chr6g0247131 Rosa chinensis HOM05D003513 ORTHO05D004660 4.4e-17 91.3 63 69.8
Duzib248G1448 Durio zibethinus HOM05D003513 ORTHO05D004660 5.8e-17 90.9 63 69.8
Nn4g22684 Nelumbo nucifera HOM05D003513 ORTHO05D004660 5.8e-17 90.9 58 75.9
EL10Ac4g09206 Beta vulgaris HOM05D003513 ORTHO05D004660 9.9e-17 90.1 63 69.8
FvH4_2g02710 Fragaria vesca HOM05D003513 ORTHO05D004660 9.9e-17 90.1 63 68.3
FAN15G2646 Fragaria x ananassa HOM05D003513 ORTHO05D004660 9.9e-17 90.1 63 68.3
Potri.009G082200 Populus trichocarpa HOM05D003513 ORTHO05D004660 9.9e-17 90.1 58 74.1
SalBow6G6243 Salvia bowleyana HOM05D003513 ORTHO05D004660 9.9e-17 90.1 63 69.8
AUR62000955 Chenopodium quinoa HOM05D003513 ORTHO05D004660 1.3e-16 89.7 63 69.8
Os07g0213400 Oryza sativa ssp. japonica HOM05D003513 ORTHO05D004660 1.3e-16 89.7 63 68.3
CANSAT11G1387 Cannabis sativa HOM05D003513 ORTHO05D004660 1.7e-16 89.4 63 71.4
Lalb_Chr18g0060191 Lupinus albus HOM05D003513 ORTHO05D004660 2.2e-16 89.0 63 68.3
VMungo0540G2261 Vigna mungo HOM05D003513 ORTHO05D004660 2.2e-16 89.0 73 63.0
AUR62005013 Chenopodium quinoa HOM05D003513 ORTHO05D004660 2.9e-16 88.6 63 68.3
FAN24G3528 Fragaria x ananassa HOM05D003513 ORTHO05D004660 2.9e-16 88.6 63 66.7
SGA_v2.0_scaffold32G12967 Striga asiatica HOM05D003513 ORTHO05D004660 2.9e-16 88.6 63 68.3
Zm00001eb325060 Zea mays HOM05D003513 ORTHO05D004660 2.9e-16 88.6 63 66.7
MSTRG.8970 Avicennia marina HOM05D003513 ORTHO05D004660 4.9e-16 87.8 63 69.8
MSTRG.8971 Avicennia marina HOM05D003513 ORTHO05D004660 4.9e-16 87.8 63 68.3
FAN27G0638 Fragaria x ananassa HOM05D003513 ORTHO05D004660 4.9e-16 87.8 63 66.7
unitig_0.g631 Utricularia gibba HOM05D003513 ORTHO05D004660 8.3e-16 87.0 58 70.7
QL11p027784 Quercus lobata HOM05D003513 ORTHO05D004660 1.1e-15 86.7 63 68.3
SHI04900 Sapria himalayana HOM05D003513 ORTHO05D004660 1.9e-15 85.9 60 70.0
BcaB04g17698 Brassica carinata HOM05D003513 ORTHO05D004660 3.2e-15 85.1 49 91.8
MBI18_g04900_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 7.1e-15 84.0 58 70.7
HPP92_011751 Vanilla planifolia HOM05D003513 ORTHO05D004660 7.1e-15 84.0 63 66.7
ATR0681G195 Amborella trichopoda HOM05D003513 ORTHO05D004660 2.7e-14 82.0 77 59.7
Glyma.07G229300 Glycine max HOM05D003513 ORTHO05D004660 2.7e-14 82.0 63 63.5
MBI18_g12443_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 4.6e-14 81.3 58 69.0
CDE04G2077 Ceratophyllum demersum HOM05D000016 ORTHO05D000538 1.0e-13 80.1 71 59.2
CDE07G1727 Ceratophyllum demersum HOM05D003513 ORTHO05D004660 2.3e-13 79.0 71 57.7
Gohir.A01G179633 Gossypium hirsutum HOM05D003513 ORTHO05D004660 2.5e-12 75.5 51 70.6
Dinv17746 Davidia involucrata HOM05D003513 ORTHO05D004660 4.3e-12 74.7 45 77.8
SEGI_16177 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 7.3e-12 73.9 63 57.1
C09p21920 Brassica napus HOM05D001670 ORTHO05D015800 4.7e-11 71.2 50 76.0
Gorai.002G212100 Gossypium raimondii HOM05D003513 ORTHO05D004660 6.2e-11 70.9 51 68.6
Mapoly0037s0029 Marchantia polymorpha HOM05D003513 ORTHO05D004660 1.1e-10 70.1 63 54.0
MD10G1114400 Malus domestica HOM05D003513 ORTHO05D004660 1.4e-10 69.7 50 66.0
BolC1t03102H Brassica oleracea HOM05D003531 ORTHO05D015800 1.8e-10 69.3 38 92.1
SMO119G0189 Selaginella moellendorffii HOM05D003513 ORTHO05D004660 3.1e-10 68.6 63 54.0
AagrBONN_evm.TU.Sc2ySwM_289.2 Anthoceros agrestis HOM05D003513 ORTHO05D004660 5.2e-10 67.8 63 54.0
AagrBONN_evm.TU.Sc2ySwM_362.2667 Anthoceros agrestis HOM05D003513 ORTHO05D004660 5.2e-10 67.8 63 54.0
HanXRQChr17g0550541 Helianthus annuus HOM05D003513 ORTHO05D004660 5.2e-10 67.8 50 68.0
A09p57370 Brassica napus HOM05D003513 ORTHO05D004660 2.0e-09 65.9 38 94.7
TAR629G2534 Trochodendron aralioides HOM05D003513 ORTHO05D004660 2.6e-09 65.5 45 73.3
HPP92_025257 Vanilla planifolia HOM05D003513 ORTHO05D004660 2.6e-09 65.5 45 62.2
BolC8t52234H Brassica oleracea HOM05D003513 ORTHO05D004660 7.6e-09 63.9 68 60.3
SEGI_38183 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 3.8e-08 61.6 45 66.7
C08p46960 Brassica napus HOM05D003513 ORTHO05D013524 8.4e-08 60.5 67 58.2
Pp3c17_21630 Physcomitrium patens HOM05D003513 ORTHO05D004660 1.4e-07 59.7 63 46.0
Sabra16G0180200 Salix brachista HOM05D003513 ORTHO05D004660 1.6e-06 56.2 38 68.4


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