Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p15150 Brassica napus HOM05D016815 ORTHO05D020093 6.0e-228 793.9 414 100.0
BolC6t36689H Brassica oleracea HOM05D016815 ORTHO05D020093 6.0e-228 793.9 414 100.0
C03p47070 Brassica napus HOM05D016815 ORTHO05D020093 1.5e-77 294.3 341 50.4
A10p16820 Brassica napus HOM05D016815 ORTHO05D012489 3.6e-47 193.4 293 40.6
BcaC06g33741 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-46 191.8 325 42.5
C02p60610 Brassica napus HOM05D016815 ORTHO05D020093 2.0e-37 161.0 116 75.0
BcaC09g50328 Brassica carinata HOM05D000018 ORTHO05D008577 7.5e-37 159.1 225 45.3
BraA10t43824Z Brassica rapa HOM05D001239 ORTHO05D000925 1.6e-34 151.4 264 41.3
BolC9t59809H Brassica oleracea HOM05D016815 ORTHO05D012489 1.0e-33 148.7 207 46.4
BcaC03g18002 Brassica carinata HOM05D016815 ORTHO05D020093 3.7e-28 130.2 96 75.0
BolC6t35761H Brassica oleracea HOM05D016815 ORTHO05D012489 4.1e-27 126.7 179 44.1
BcaC01g00485 Brassica carinata HOM05D000496 ORTHO05D000411 8.6e-25 119.0 281 35.2
BcaB04g17452 Brassica carinata HOM05D009238 ORTHO05D019868 1.9e-24 117.9 428 30.1
BcaC06g33612 Brassica carinata HOM05D011670 ORTHO05D031889 5.5e-24 116.3 193 44.0
BraA03t12194Z Brassica rapa HOM05D009238 ORTHO05D012489 2.8e-23 114.0 262 35.9
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-23 112.5 435 27.8
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 2.0e-21 107.8 366 30.1
C06p11850 Brassica napus HOM05D009238 ORTHO05D012489 2.6e-21 107.5 257 31.1
C04p60320 Brassica napus HOM05D011670 ORTHO05D027357 3.4e-21 107.1 204 40.2
C05p09640 Brassica napus HOM05D011670 ORTHO05D027357 5.7e-21 106.3 204 39.7
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-20 105.1 308 30.5
BcaC03g16856 Brassica carinata HOM05D009238 ORTHO05D019868 1.3e-20 105.1 174 39.1
BraA02t08674Z Brassica rapa HOM05D009238 ORTHO05D012489 1.7e-20 104.8 415 27.2
BcaC07g36896 Brassica carinata HOM05D004566 ORTHO05D000925 2.4e-19 100.9 241 35.7
BcaB06g25898 Brassica carinata HOM05D011670 ORTHO05D012489 7.0e-19 99.4 156 46.2
A04p06620 Brassica napus HOM05D009238 ORTHO05D012489 1.2e-18 98.6 181 35.4
BcaC01g01482 Brassica carinata HOM05D009238 ORTHO05D021611 2.3e-17 94.4 216 33.3
BcaB05g23728 Brassica carinata HOM05D009238 ORTHO05D012489 2.9e-17 94.0 349 27.5
BcaC07g39368 Brassica carinata HOM05D009238 ORTHO05D012489 6.6e-17 92.8 203 34.0
BraA04t16367Z Brassica rapa HOM05D009238 ORTHO05D012489 8.6e-17 92.4 343 29.2
BraA03t13842Z Brassica rapa HOM05D009238 ORTHO05D020093 1.1e-16 92.0 203 34.5
BcaB01g02479 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-15 87.0 254 29.1
BcaC07g39656 Brassica carinata HOM05D000722 ORTHO05D000590 3.6e-15 87.0 165 36.4
BcaB06g28487 Brassica carinata HOM05D011670 ORTHO05D027357 8.0e-15 85.9 185 37.3
BolC9t57963H Brassica oleracea HOM05D011670 ORTHO05D020093 8.0e-15 85.9 99 49.5
C07p03520 Brassica napus HOM05D001239 ORTHO05D027739 2.3e-14 84.3 363 27.8
C01p26600 Brassica napus HOM05D011670 ORTHO05D031889 3.4e-13 80.5 215 33.0
BolC6t38778H Brassica oleracea HOM05D009238 ORTHO05D012489 4.4e-13 80.1 163 41.7
BolC1t02602H Brassica oleracea HOM05D011670 ORTHO05D031889 9.8e-13 79.0 104 45.2
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 4.9e-12 76.6 381 27.3
BcaC09g51060 Brassica carinata HOM05D000496 ORTHO05D000411 6.4e-12 76.3 158 34.8
BcaB06g28484 Brassica carinata HOM05D011670 ORTHO05D027357 8.3e-12 75.9 109 45.9
BcaC02g12210 Brassica carinata HOM05D000003 ORTHO05D000925 8.3e-12 75.9 103 41.7
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-11 73.2 249 26.9
A10p14470 Brassica napus HOM05D011670 ORTHO05D027274 5.4e-11 73.2 99 50.5
BcaC07g40131 Brassica carinata HOM05D014076 ORTHO05D000006 7.0e-11 72.8 400 26.2
BcaB01g02634 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-10 72.0 232 28.9
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 4.6e-10 70.1 226 30.5
BolC6t35760H Brassica oleracea HOM05D023674 ORTHO05D033661 7.8e-10 69.3 154 33.8
BolC6t35474H Brassica oleracea HOM05D016295 ORTHO05D017554 1.3e-09 68.6 138 35.5
BcaC02g09623 Brassica carinata HOM05D002743 ORTHO05D002895 3.9e-09 67.0 97 49.5
BcaC08g43076 Brassica carinata HOM05D016295 ORTHO05D017554 3.9e-09 67.0 153 34.0
BcaC02g11658 Brassica carinata HOM05D014076 ORTHO05D021903 5.0e-09 66.6 337 26.7
BolC4t26060H Brassica oleracea HOM05D009238 ORTHO05D012489 5.0e-09 66.6 78 56.4
BcaC02g10000 Brassica carinata HOM05D016295 ORTHO05D017554 6.6e-09 66.2 158 34.8
C03p49130 Brassica napus HOM05D014076 ORTHO05D024532 8.6e-09 65.9 134 33.6
BcaC09g49677 Brassica carinata HOM05D000496 ORTHO05D011709 1.1e-08 65.5 125 35.2
C01p34040 Brassica napus HOM05D001239 ORTHO05D011709 1.1e-08 65.5 125 35.2
BraA01t01837Z Brassica rapa HOM05D014076 ORTHO05D021903 1.1e-08 65.5 252 27.8
BcaC08g47032 Brassica carinata HOM05D009238 ORTHO05D012489 1.5e-08 65.1 189 33.3
C04p33720 Brassica napus HOM05D031458 ORTHO05D027524 1.5e-08 65.1 137 37.2
BolC4t24940H Brassica oleracea HOM05D031458 ORTHO05D027524 1.5e-08 65.1 137 37.2
BcaC04g21866 Brassica carinata HOM05D011670 ORTHO05D012489 1.9e-08 64.7 93 45.2
BcaC06g36045 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-08 64.3 147 32.0
BolC5t30244H Brassica oleracea HOM05D001239 ORTHO05D011709 2.5e-08 64.3 151 35.8
C02p30810 Brassica napus HOM05D009238 ORTHO05D012489 3.3e-08 63.9 128 32.0
BolC2t10791H Brassica oleracea HOM05D009238 ORTHO05D019868 3.3e-08 63.9 85 41.2
BolC7t40747H Brassica oleracea HOM05D001239 ORTHO05D027739 4.3e-08 63.5 139 36.0
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 5.6e-08 63.2 275 28.4
BcaB07g32141 Brassica carinata HOM05D000496 ORTHO05D000411 5.6e-08 63.2 312 24.0
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 7.3e-08 62.8 374 23.5
BcaB01g02065 Brassica carinata HOM05D031458 ORTHO05D027524 9.5e-08 62.4 134 35.8
BcaB07g33550 Brassica carinata HOM05D001239 ORTHO05D011709 9.5e-08 62.4 135 37.0
BcaC01g02173 Brassica carinata HOM05D001239 ORTHO05D017499 9.5e-08 62.4 224 26.8
C03p67910 Brassica napus HOM05D001239 ORTHO05D017499 9.5e-08 62.4 222 27.0
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 1.2e-07 62.0 259 27.0
BraA10t43537Z Brassica rapa HOM05D011670 ORTHO05D027274 1.6e-07 61.6 75 53.3
BcaB04g18066 Brassica carinata HOM05D001239 ORTHO05D023908 2.1e-07 61.2 138 32.6
CARHR154060 Cardamine hirsuta HOM05D001239 ORTHO05D011709 2.8e-07 60.8 71 46.5
BcaC02g09195 Brassica carinata HOM05D001239 ORTHO05D031919 4.7e-07 60.1 142 32.4
A02p36830 Brassica napus HOM05D009238 ORTHO05D012489 4.7e-07 60.1 49 65.3
BcaB06g28485 Brassica carinata HOM05D011670 ORTHO05D001112 6.2e-07 59.7 108 38.9
C07p04310 Brassica napus HOM05D001239 ORTHO05D011709 8.0e-07 59.3 135 34.8
BolC2t08494H Brassica oleracea HOM05D009238 ORTHO05D012489 8.0e-07 59.3 75 52.0
BcaB08g34667 Brassica carinata HOM05D000441 ORTHO05D017554 1.4e-06 58.5 134 35.8
C08p14340 Brassica napus HOM05D001239 ORTHO05D024532 1.4e-06 58.5 122 36.1
C09p42620 Brassica napus HOM05D001239 ORTHO05D011709 1.4e-06 58.5 143 35.7
BolC1t05632H Brassica oleracea HOM05D014076 ORTHO05D021903 1.4e-06 58.5 201 26.4
BcaC01g03871 Brassica carinata HOM05D001239 ORTHO05D011709 1.8e-06 58.2 47 61.7
C04p30980 Brassica napus HOM05D001035 ORTHO05D021752 1.8e-06 58.2 53 56.6
BolC2t07633H Brassica oleracea HOM05D009238 ORTHO05D019868 1.8e-06 58.2 217 30.4
A01p18960 Brassica napus HOM05D014076 ORTHO05D021903 2.3e-06 57.8 272 27.2
C02p47500 Brassica napus HOM05D009238 ORTHO05D019868 2.3e-06 57.8 337 23.4
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 2.3e-06 57.8 226 31.0
BraA04t17766Z Brassica rapa HOM05D001239 ORTHO05D024427 2.3e-06 57.8 162 29.0
A06p35270 Brassica napus HOM05D000591 ORTHO05D000579 3.1e-06 57.4 47 61.7
BolC5t29932H Brassica oleracea HOM05D001239 ORTHO05D033080 3.1e-06 57.4 129 34.9
BcaB03g11924 Brassica carinata HOM05D001239 ORTHO05D011709 4.0e-06 57.0 49 57.1
C04p52150 Brassica napus HOM05D027742 ORTHO05D027054 4.0e-06 57.0 140 32.9
C09p49690 Brassica napus HOM05D001239 ORTHO05D011709 4.0e-06 57.0 137 32.8
BolC8t49470H Brassica oleracea HOM05D009238 ORTHO05D019868 4.0e-06 57.0 85 36.5
BraA09t38523Z Brassica rapa HOM05D027742 ORTHO05D027054 4.0e-06 57.0 152 34.9
BcaC03g17089 Brassica carinata HOM05D025306 ORTHO05D011709 5.2e-06 56.6 135 33.3
C01p30110 Brassica napus HOM05D001239 ORTHO05D023908 5.2e-06 56.6 138 32.6
BolC1t03373H Brassica oleracea HOM05D001239 ORTHO05D011709 6.8e-06 56.2 64 45.3
BraA06t26451Z Brassica rapa HOM05D001307 ORTHO05D001158 6.8e-06 56.2 44 63.6
BolC1t02956H Brassica oleracea HOM05D001239 ORTHO05D023908 8.9e-06 55.8 136 32.4
BolC3t17197H Brassica oleracea HOM05D014076 ORTHO05D024532 8.9e-06 55.8 50 56.0


User provided reference genes

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