Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p14660 Brassica napus HOM05D003164 ORTHO05D003575 2.6e-40 168.3 86 100.0
Carub.0006s2530 Capsella rubella HOM05D003164 ORTHO05D003575 2.8e-15 85.1 44 93.2
Aa31LG5G15420 Aethionema arabicum HOM05D003164 ORTHO05D003575 4.8e-15 84.3 47 87.2
CARHR079330 Cardamine hirsuta HOM05D003164 ORTHO05D003575 6.3e-15 84.0 47 87.2
Sp3g03840 Schrenkiella parvula HOM05D003164 ORTHO05D003575 6.3e-15 84.0 47 87.2
AT5G27210 Arabidopsis thaliana HOM05D003164 ORTHO05D003575 8.3e-15 83.6 44 90.9
BcaB04g19285 Brassica carinata HOM05D003164 ORTHO05D003575 8.3e-15 83.6 47 85.1
BcaC01g04338 Brassica carinata HOM05D003164 ORTHO05D003575 1.4e-14 82.8 47 85.1
BolC3t16416H Brassica oleracea HOM05D003164 ORTHO05D003575 1.4e-14 82.8 47 85.1
BraA03t12571Z Brassica rapa HOM05D003164 ORTHO05D003575 1.4e-14 82.8 47 85.1
Thhalv10004666m.g Eutrema salsugineum HOM05D003164 ORTHO05D003575 1.4e-14 82.8 44 90.9
AL6G39990 Arabidopsis lyrata HOM05D003164 ORTHO05D003575 2.4e-14 82.0 44 88.6
Sp2g20450 Schrenkiella parvula HOM05D003164 ORTHO05D003575 2.4e-14 82.0 44 88.6
THA.LOC104802816 Tarenaya hassleriana HOM05D003164 ORTHO05D003575 4.1e-14 81.3 47 83.0
THA.LOC104818663 Tarenaya hassleriana HOM05D003164 ORTHO05D003575 9.1e-14 80.1 47 80.9
AL3G15380 Arabidopsis lyrata HOM05D003164 ORTHO05D003575 1.2e-13 79.7 47 85.1
AT3G05010 Arabidopsis thaliana HOM05D003164 ORTHO05D003575 1.2e-13 79.7 47 85.1
Thhalv10021202m.g Eutrema salsugineum HOM05D003164 ORTHO05D003575 1.2e-13 79.7 47 85.1
Aa31LG11G8950 Aethionema arabicum HOM05D003164 ORTHO05D003575 2.7e-13 78.6 44 84.1
BcaC05g29985 Brassica carinata HOM05D003164 ORTHO05D003575 3.5e-13 78.2 48 83.3
Carub.0003s0425 Capsella rubella HOM05D003164 ORTHO05D003575 3.5e-13 78.2 47 83.0
Prupe.6G335200 Prunus persica HOM05D003164 ORTHO05D003575 2.3e-12 75.5 47 76.6
BcaC04g23697 Brassica carinata HOM05D003164 ORTHO05D003575 6.6e-12 73.9 44 79.5
C09p05590 Brassica napus HOM05D003164 ORTHO05D003575 6.6e-12 73.9 44 79.5
BolC9t53487H Brassica oleracea HOM05D003164 ORTHO05D003575 6.6e-12 73.9 44 79.5
BcaB04g19654 Brassica carinata HOM05D003164 ORTHO05D003575 8.6e-12 73.6 44 79.5
Ciclev10001931m.g Citrus clementina HOM05D003164 ORTHO05D003575 1.1e-11 73.2 44 77.3
MD00G1051800 Malus domestica HOM05D003164 ORTHO05D003575 1.5e-11 72.8 47 74.5
MD12G1231400 Malus domestica HOM05D003164 ORTHO05D003575 3.3e-11 71.6 47 72.3
Atru.chr2.631 Acer truncatum HOM05D003164 ORTHO05D003575 9.5e-11 70.1 44 75.0
A09p05170 Brassica napus HOM05D003164 ORTHO05D003575 9.5e-11 70.1 44 75.0
BraA09t36156Z Brassica rapa HOM05D003164 ORTHO05D003575 9.5e-11 70.1 44 75.0
Sabra13G0030400 Salix brachista HOM05D003164 ORTHO05D003575 4.7e-10 67.8 44 77.3
Cfa006502 Carpinus fangiana HOM05D003164 ORTHO05D003575 6.1e-10 67.4 47 61.7
COL.COLO4_36048 Corchorus olitorius HOM05D003164 ORTHO05D003575 6.1e-10 67.4 44 72.7
Haze_04286 Corylus avellana HOM05D003164 ORTHO05D003575 6.1e-10 67.4 47 61.7
TWI36G0146 Tripterygium wilfordii HOM05D003164 ORTHO05D003575 1.0e-09 66.6 47 70.2
FvH4_6g04200 Fragaria vesca HOM05D003164 ORTHO05D003575 1.4e-09 66.2 47 68.1
FAN09G1513 Fragaria x ananassa HOM05D003164 ORTHO05D003575 1.4e-09 66.2 47 68.1
FAN14G0559 Fragaria x ananassa HOM05D003164 ORTHO05D003575 1.4e-09 66.2 47 68.1
Lj9A675G47 Lonicera japonica HOM05D003164 ORTHO05D003575 1.4e-09 66.2 44 72.7
FAN09G4779 Fragaria x ananassa HOM05D003164 ORTHO05D003575 1.8e-09 65.9 42 73.8
Duzib177G0106 Durio zibethinus HOM05D003164 ORTHO05D003575 2.3e-09 65.5 47 66.0
RcHm_v2.0_Chr3g0452881 Rosa chinensis HOM05D003164 ORTHO05D003575 2.3e-09 65.5 47 68.1
TWI56G1291 Tripterygium wilfordii HOM05D003164 ORTHO05D003575 2.3e-09 65.5 47 68.1
CiPaw.07G011200 Carya illinoinensis HOM05D003164 ORTHO05D003575 4.0e-09 64.7 47 61.7
Gohir.A11G237400 Gossypium hirsutum HOM05D003164 ORTHO05D003575 5.2e-09 64.3 47 63.8
Gohir.D11G247800 Gossypium hirsutum HOM05D003164 ORTHO05D003575 5.2e-09 64.3 47 63.8
Gorai.007G264200 Gossypium raimondii HOM05D003164 ORTHO05D003575 5.2e-09 64.3 47 63.8
Dinv26584 Davidia involucrata HOM05D003164 ORTHO05D003575 8.9e-09 63.5 46 69.6
MELO3C015372.2 Cucumis melo HOM05D003164 ORTHO05D003575 1.2e-08 63.2 47 63.8
CsaV3_1G039490 Cucumis sativus L. HOM05D003164 ORTHO05D003575 1.2e-08 63.2 47 63.8
Duzib106G1424 Durio zibethinus HOM05D003164 ORTHO05D003575 1.2e-08 63.2 47 61.7
Duzib106G1812 Durio zibethinus HOM05D003164 ORTHO05D003575 1.2e-08 63.2 47 61.7
Potri.013G031200 Populus trichocarpa HOM05D003164 ORTHO05D003575 1.2e-08 63.2 57 63.2
TAR629G0113 Trochodendron aralioides HOM05D003164 ORTHO05D003575 1.2e-08 63.2 46 67.4
CANSAT54G2654 Cannabis sativa HOM05D003164 ORTHO05D003575 2.6e-08 62.0 47 61.7
ClCG03G016490 Citrullus lanatus HOM05D003164 ORTHO05D003575 2.6e-08 62.0 47 61.7
FAN05G2991 Fragaria x ananassa HOM05D003164 ORTHO05D003575 3.4e-08 61.6 47 66.0
Eucgr.B01759 Eucalyptus grandis HOM05D003164 ORTHO05D003575 4.4e-08 61.2 42 71.4
Sed0001558 Sechium edule HOM05D003164 ORTHO05D003575 4.4e-08 61.2 47 61.7
PSO017G0225 Papaver somniferum HOM05D003164 ORTHO05D003575 7.5e-08 60.5 47 61.7
QL03p000954 Quercus lobata HOM05D003164 ORTHO05D003575 7.5e-08 60.5 60 51.7
FAN05G0476 Fragaria x ananassa HOM05D003164 ORTHO05D003575 9.8e-08 60.1 47 63.8
MD06G1201800 Malus domestica HOM05D003164 ORTHO05D003575 9.8e-08 60.1 44 63.6
Rhsim05G0148300 Rhododendron simsii HOM05D003164 ORTHO05D003575 9.8e-08 60.1 44 68.2
Thecc.05G252700 Theobroma cacao HOM05D003164 ORTHO05D003575 9.8e-08 60.1 47 61.7
CDE04G3262 Ceratophyllum demersum HOM05D003164 ORTHO05D003575 1.3e-07 59.7 44 61.4
MD14G1210800 Malus domestica HOM05D003164 ORTHO05D003575 1.3e-07 59.7 46 60.9
CSS0045224 Camellia sinensis var. sinensis HOM05D003164 ORTHO05D003575 1.7e-07 59.3 58 56.9
Manes.09G160300 Manihot esculenta HOM05D003164 ORTHO05D003575 1.7e-07 59.3 35 80.0
PGR083G2625 Punica granatum HOM05D003164 ORTHO05D003575 1.7e-07 59.3 48 66.7
vmacro19661 Vaccinium macrocarpon HOM05D003164 ORTHO05D003575 1.7e-07 59.3 44 68.2
COL.COLO4_06747 Corchorus olitorius HOM05D003164 ORTHO05D003575 2.2e-07 58.9 47 59.6
Dinv27611 Davidia involucrata HOM05D003164 ORTHO05D003575 2.2e-07 58.9 46 60.9
CDE07G2009 Ceratophyllum demersum HOM05D003164 ORTHO05D003575 2.8e-07 58.5 44 59.1
Sabra05G0041400 Salix brachista HOM05D003164 ORTHO05D003575 2.8e-07 58.5 44 65.9
Eucgr.K02522 Eucalyptus grandis HOM05D003164 ORTHO05D003575 4.9e-07 57.8 46 60.9
Aqoxy3G03622 Aquilegia oxysepala HOM05D003164 ORTHO05D003575 6.3e-07 57.4 47 59.6
Phvul.007G184000 Phaseolus vulgaris HOM05D003164 ORTHO05D003575 6.3e-07 57.4 46 63.0
Actinidia25777 Actinidia chinensis HOM05D003164 ORTHO05D003575 8.3e-07 57.0 46 60.9
MBI16_g29102_MAGBIO Magnolia biondii HOM05D003164 ORTHO05D003575 8.3e-07 57.0 46 63.0
Manes.14G085000 Manihot esculenta HOM05D003164 ORTHO05D003575 8.3e-07 57.0 47 59.6
Rhsim08G0146800 Rhododendron simsii HOM05D003164 ORTHO05D003575 8.3e-07 57.0 46 60.9
HPP92_012252 Vanilla planifolia HOM05D003164 ORTHO05D003575 8.3e-07 57.0 46 60.9
HPP92_012297 Vanilla planifolia HOM05D003164 ORTHO05D003575 8.3e-07 57.0 46 60.9
Cc02_g32260 Coffea canephora HOM05D003164 ORTHO05D003575 1.4e-06 56.2 46 60.9
Nitab4.5_0001688g0090 Nicotiana tabacum HOM05D003164 ORTHO05D003575 1.4e-06 56.2 46 54.3
PSO478G0868 Papaver somniferum HOM05D003164 ORTHO05D003575 1.4e-06 56.2 47 57.4
vmacro17601 Vaccinium macrocarpon HOM05D003164 ORTHO05D003575 1.4e-06 56.2 46 56.5
Medtr1g081910 Medicago truncatula HOM05D003164 ORTHO05D003575 1.8e-06 55.8 46 58.7
PGR044G1436 Punica granatum HOM05D003164 ORTHO05D003575 1.8e-06 55.8 47 55.3
DCAR_003294 Daucus carota HOM05D003164 ORTHO05D003575 2.4e-06 55.5 47 57.4
Lalb_Chr21g0313951 Lupinus albus HOM05D003164 ORTHO05D003575 2.4e-06 55.5 46 58.7
TPR.G2710 Trifolium pratense HOM05D003164 ORTHO05D003575 2.4e-06 55.5 46 60.9
VMungo0720G2725 Vigna mungo HOM05D003164 ORTHO05D003575 2.4e-06 55.5 46 60.9
Ah.04g160020 Amaranthus hybridus HOM05D003164 ORTHO05D003575 3.1e-06 55.1 46 54.3
Duzib205G1571 Durio zibethinus HOM05D003164 ORTHO05D003575 3.1e-06 55.1 48 56.2
Lsat_1_v5_gn_5_22561 Lactuca sativa HOM05D003164 ORTHO05D003575 3.1e-06 55.1 46 52.2
RcHm_v2.0_Chr7g0182971 Rosa chinensis HOM05D003164 ORTHO05D003575 3.1e-06 55.1 47 53.2
AUR62000931 Chenopodium quinoa HOM05D003164 ORTHO05D003575 4.1e-06 54.7 46 58.7
AUR62005039 Chenopodium quinoa HOM05D003164 ORTHO05D003575 4.1e-06 54.7 46 58.7
Hma1.2p1_0322F.1_g124720 Hydrangea macrophylla HOM05D003164 ORTHO05D003575 4.1e-06 54.7 51 51.0
Lj5g0014613 Lotus japonicus HOM05D003164 ORTHO05D003575 4.1e-06 54.7 46 58.7
Ciclev10021445m.g Citrus clementina HOM05D003164 ORTHO05D003575 5.4e-06 54.3 47 57.4
HanXRQChr05g0157281 Helianthus annuus HOM05D003164 ORTHO05D003575 5.4e-06 54.3 46 54.3
Lsat_1_v5_gn_4_110541 Lactuca sativa HOM05D003164 ORTHO05D003575 5.4e-06 54.3 47 51.1
Glyma.10G158600 Glycine max HOM05D003164 ORTHO05D003575 7.0e-06 53.9 46 58.7
Glyma.20G230000 Glycine max HOM05D003164 ORTHO05D003575 7.0e-06 53.9 46 58.7
Glyma.03G242700 Glycine max HOM05D003164 ORTHO05D003575 9.2e-06 53.5 46 60.9
Lalb_Chr02g0148541 Lupinus albus HOM05D003164 ORTHO05D003575 9.2e-06 53.5 46 60.9
Psat6g148120 Pisum sativum HOM05D003164 ORTHO05D003575 9.2e-06 53.5 58 55.2


User provided reference genes

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