Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p13040 Brassica napus HOM05D000313 ORTHO05D000065 9.8e-86 320.1 161 100.0
BolC6t36453H Brassica oleracea HOM05D000313 ORTHO05D000065 2.6e-38 162.5 84 95.2
BolC6t36457H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-38 161.8 84 95.2
BolC6t36461H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-38 161.8 84 95.2
BolC6t36465H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-38 161.8 84 95.2
C01p21550 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-24 115.5 88 65.9
BolC1t02075H Brassica oleracea HOM05D000313 ORTHO05D000065 3.7e-24 115.5 88 65.9
BolC5t31313H Brassica oleracea HOM05D000313 ORTHO05D000065 8.2e-24 114.4 89 69.7
C07p50350 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-23 113.6 91 68.1
C06p14790 Brassica napus HOM05D000305 ORTHO05D000065 5.3e-23 111.7 89 67.4
BolC6t36657H Brassica oleracea HOM05D000305 ORTHO05D000065 5.3e-23 111.7 89 67.4
BolSC21t60252H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-22 110.5 89 67.4
BraA05t19977Z Brassica rapa HOM05D000313 ORTHO05D000065 2.0e-22 109.8 89 65.2
C08p01640 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-22 109.4 89 67.4
BolC8t46967H Brassica oleracea HOM05D000313 ORTHO05D000065 2.6e-22 109.4 89 67.4
C05p25650 Brassica napus HOM05D000313 ORTHO05D000065 3.4e-22 109.0 91 63.7
C03p67840 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-22 108.6 89 66.3
BolC5t31292H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-21 106.7 91 63.7
BolC2t08209H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-21 106.3 89 64.0
BcaC08g45073 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-21 105.5 89 61.8
C04p44980 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-21 105.5 88 64.8
C06p26820 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-21 105.5 89 61.8
BolC5t31705H Brassica oleracea HOM05D000313 ORTHO05D000065 8.5e-21 104.4 89 64.0
BcaB01g04686 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-20 104.0 134 48.5
C02p20670 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-20 103.2 83 65.1
C08p01650 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-20 102.4 89 61.8
BolC8t46968H Brassica oleracea HOM05D000313 ORTHO05D000065 3.2e-20 102.4 89 61.8
A09p29630 Brassica napus HOM05D000313 ORTHO05D000065 5.5e-20 101.7 96 59.4
BraA09t38529Z Brassica rapa HOM05D000313 ORTHO05D000065 7.2e-20 101.3 87 65.5
BolSC21t60251H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-19 100.5 113 50.4
BcaB05g24149 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-19 99.0 89 53.9
C03p67830 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-19 99.0 113 49.6
C09p55240 Brassica napus HOM05D000305 ORTHO05D000065 1.0e-18 97.4 88 61.4
BraA05t21748Z Brassica rapa HOM05D000313 ORTHO05D000065 5.1e-18 95.1 76 67.1
C07p02650 Brassica napus HOM05D000313 ORTHO05D000065 6.7e-18 94.7 81 66.7
BolC7t40664H Brassica oleracea HOM05D000313 ORTHO05D000065 6.7e-18 94.7 81 66.7
C05p00200 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-17 92.8 88 53.4
C07p05180 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-17 92.8 88 53.4
BolC6t37005H Brassica oleracea HOM05D000313 ORTHO05D000065 2.6e-17 92.8 88 53.4
BraA08t32937Z Brassica rapa HOM05D000313 ORTHO05D000065 3.3e-17 92.4 88 53.4
BcaB05g24332 Brassica carinata HOM05D000313 ORTHO05D000065 4.4e-17 92.0 93 54.8
A09p30420 Brassica napus HOM05D000305 ORTHO05D000065 1.4e-15 87.0 75 62.7
BolC2t09302H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-15 87.0 89 50.6
BraA09t40035Z Brassica rapa HOM05D000313 ORTHO05D000065 2.4e-15 86.3 88 50.0
BolC1t02310H Brassica oleracea HOM05D000313 ORTHO05D000065 5.3e-15 85.1 99 46.5
BolC4t26899H Brassica oleracea HOM05D000313 ORTHO05D000065 9.1e-15 84.3 88 48.9
BolC7t43481H Brassica oleracea HOM05D000305 ORTHO05D000065 9.1e-15 84.3 88 48.9
C05p31210 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-14 84.0 88 48.9
BolC2t10493H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-14 83.6 88 47.7
C04p14760 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-14 82.0 88 48.9
C06p53880 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-14 82.0 88 50.0
BolC4t24845H Brassica oleracea HOM05D000305 ORTHO05D000065 4.5e-14 82.0 88 50.0
C03p73900 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-13 80.5 88 46.6
AL1G39460 Arabidopsis lyrata HOM05D000313 ORTHO05D000065 1.7e-13 80.1 88 46.6
BcaB06g27508 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-13 80.1 86 48.8
A06p21660 Brassica napus HOM05D000305 ORTHO05D000065 2.9e-13 79.3 67 67.2
BolC8t48614H Brassica oleracea HOM05D000313 ORTHO05D000065 6.5e-13 78.2 106 44.3
Carub.0007s3022 Capsella rubella HOM05D000313 ORTHO05D000065 6.5e-13 78.2 88 48.9
AT1G14800 Arabidopsis thaliana HOM05D000313 ORTHO05D000065 8.5e-13 77.8 88 45.5
C03p74100 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-12 77.4 88 45.5
BolC4t22672H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-12 77.4 80 51.2
BolC3t19065H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-12 76.3 89 48.3
BolC7t42885H Brassica oleracea HOM05D000313 ORTHO05D000065 3.2e-12 75.9 89 46.1
Thhalv10000462m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 3.2e-12 75.9 88 44.3
A09p30460 Brassica napus HOM05D000305 ORTHO05D000065 4.2e-12 75.5 67 62.7
BolC3t20593H Brassica oleracea HOM05D000313 ORTHO05D000065 4.2e-12 75.5 89 46.1
BraA02t08268Z Brassica rapa HOM05D000313 ORTHO05D000065 4.2e-12 75.5 88 45.5
BraA09t38616Z Brassica rapa HOM05D000305 ORTHO05D000065 4.2e-12 75.5 67 62.7
BolC5t32421H Brassica oleracea HOM05D000313 ORTHO05D000065 5.5e-12 75.1 89 46.1
BolC6t36303H Brassica oleracea HOM05D000313 ORTHO05D000065 5.5e-12 75.1 83 47.0
BolC1t00994H Brassica oleracea HOM05D000313 ORTHO05D000065 7.2e-12 74.7 86 45.3
BolC1t04614H Brassica oleracea HOM05D000313 ORTHO05D000065 7.2e-12 74.7 80 50.0
BolC4t23750H Brassica oleracea HOM05D000313 ORTHO05D000065 7.2e-12 74.7 89 46.1
BolC7t42649H Brassica oleracea HOM05D000313 ORTHO05D000065 7.2e-12 74.7 102 41.2
A01p32780 Brassica napus HOM05D000313 ORTHO05D024143 9.4e-12 74.3 40 85.0
BolC6t36081H Brassica oleracea HOM05D000313 ORTHO05D000065 9.4e-12 74.3 89 44.9
BraA01t03405Z Brassica rapa HOM05D029020 ORTHO05D024143 9.4e-12 74.3 40 85.0
BraA09t38611Z Brassica rapa HOM05D000305 ORTHO05D000065 9.4e-12 74.3 67 61.2
Thhalv10009766m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 1.2e-11 73.9 88 43.2
BolC9t56182H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-11 73.6 89 44.9
BolC2t10519H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-11 73.2 77 49.4
BolC6t36846H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-11 73.2 89 43.8
BolC7t42886H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-11 73.2 89 43.8
BolC7t44315H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-11 73.2 89 44.9
BolC2t08938H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-11 72.8 89 46.1
BolC8t49611H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-11 72.8 78 50.0
BolC1t03943H Brassica oleracea HOM05D000313 ORTHO05D000065 3.6e-11 72.4 111 39.6
Thhalv10005358m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 3.6e-11 72.4 88 43.2
BolC2t06933H Brassica oleracea HOM05D000313 ORTHO05D000065 4.7e-11 72.0 90 45.6
BolC4t26266H Brassica oleracea HOM05D000313 ORTHO05D000065 4.7e-11 72.0 89 44.9
BolC1t03857H Brassica oleracea HOM05D000313 ORTHO05D000065 6.1e-11 71.6 89 42.7
BolC9t56827H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-10 70.9 90 45.6
BolC7t42896H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-10 70.5 90 45.6
BolC8t51190H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-10 70.5 89 44.9
BolC2t09969H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-10 70.1 89 43.8
BolC9t54043H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-10 70.1 73 49.3
BolC9t57604H Brassica oleracea HOM05D000313 ORTHO05D000065 3.0e-10 69.3 89 42.7
BolC4t25642H Brassica oleracea HOM05D000313 ORTHO05D000065 3.9e-10 68.9 82 46.3
C06p47470 Brassica napus HOM05D000313 ORTHO05D000065 6.7e-10 68.2 75 48.0
BolC7t40591H Brassica oleracea HOM05D000313 ORTHO05D000065 6.7e-10 68.2 74 47.3
BolC6t37050H Brassica oleracea HOM05D000313 ORTHO05D000065 8.8e-10 67.8 67 55.2
C02p26880 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-09 67.0 88 43.2
BolC3t15032H Brassica oleracea HOM05D000305 ORTHO05D000065 1.5e-09 67.0 40 75.0
BraA05t19978Z Brassica rapa HOM05D000313 ORTHO05D000065 1.5e-09 67.0 88 43.2
BraA09t38612Z Brassica rapa HOM05D000313 ORTHO05D000065 1.5e-09 67.0 88 43.2
C06p26830 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-09 65.9 40 82.5
BolC8t48173H Brassica oleracea HOM05D000313 ORTHO05D000065 4.4e-09 65.5 89 42.7
BolC7t41627H Brassica oleracea HOM05D000313 ORTHO05D000065 5.7e-09 65.1 92 41.3
C06p14800 Brassica napus HOM05D000313 ORTHO05D000065 7.4e-09 64.7 88 42.0
BolC6t36658H Brassica oleracea HOM05D000313 ORTHO05D000065 7.4e-09 64.7 88 42.0
BcaB04g17775 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-08 62.8 81 43.2
BolC1t01300H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-08 62.8 35 85.7
BolC4t27110H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-08 62.8 35 85.7
BolC7t42274H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-08 62.8 69 50.7
BolC5t30812H Brassica oleracea HOM05D000313 ORTHO05D000065 3.7e-08 62.4 69 47.8
BolC7t45455H Brassica oleracea HOM05D000313 ORTHO05D000065 3.7e-08 62.4 75 54.7
BolC8t48284H Brassica oleracea HOM05D000313 ORTHO05D000065 3.7e-08 62.4 69 50.7
BolC3t18159H Brassica oleracea HOM05D000313 ORTHO05D000065 4.8e-08 62.0 69 50.7
BolC2t09228H Brassica oleracea HOM05D000313 ORTHO05D000065 8.2e-08 61.2 73 45.2
BraA01t02550Z Brassica rapa HOM05D000313 ORTHO05D000065 1.4e-07 60.5 67 50.7
BolC2t09249H Brassica oleracea HOM05D000313 ORTHO05D033824 3.1e-07 59.3 32 84.4
C07p05170 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-07 58.9 88 37.5
BolC8t48084H Brassica oleracea HOM05D000313 ORTHO05D000065 4.1e-07 58.9 72 43.1
BolC1t03048H Brassica oleracea HOM05D000400 ORTHO05D000575 5.3e-07 58.5 39 71.8
BolC2t11103H Brassica oleracea HOM05D000313 ORTHO05D000065 7.0e-07 58.2 67 50.7
AL4G17880 Arabidopsis lyrata HOM05D000313 ORTHO05D000065 9.1e-07 57.8 91 36.3
BraA08t32745Z Brassica rapa HOM05D000313 ORTHO05D000065 9.1e-07 57.8 67 47.8
BolC1t05058H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-06 57.4 38 71.1
BolC3t20003H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-06 57.4 63 49.2
BraA03t14297Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-06 57.4 75 42.7
BolC1t03208H Brassica oleracea HOM05D000313 ORTHO05D042151 1.6e-06 57.0 37 73.0
BolC6t35769H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-06 57.0 38 71.1
BcaC05g28890 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-06 56.6 94 37.2
BolC5t33765H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-06 56.6 94 37.2
BolC7t43729H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-06 56.6 67 47.8
BraA01t02309Z Brassica rapa HOM05D000313 ORTHO05D000065 2.0e-06 56.6 67 47.8
BolC8t51604H Brassica oleracea HOM05D000313 ORTHO05D000065 2.6e-06 56.2 38 71.1
BcaC04g19591 Brassica carinata HOM05D000313 ORTHO05D000065 3.5e-06 55.8 38 68.4
BolC2t09613H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-06 55.8 69 43.5
BolC4t24641H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-06 55.8 73 41.1
BolC6t36557H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-06 55.8 72 41.7
BolC9t58814H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-06 55.8 38 68.4
BolC9t58892H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-06 55.8 73 41.1
BolC2t08577H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-06 55.5 38 68.4
BolC3t18371H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-06 55.5 38 65.8
BolC4t25067H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-06 55.5 69 46.4
BcaC07g37400 Brassica carinata HOM05D000313 ORTHO05D000065 5.9e-06 55.1 94 34.0
C08p08710 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-06 55.1 94 34.0
BolC7t44193H Brassica oleracea HOM05D000313 ORTHO05D017699 5.9e-06 55.1 33 75.8
BolC8t47721H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-06 55.1 94 34.0
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 7.7e-06 54.7 94 37.2
BolC2t10731H Brassica oleracea HOM05D000313 ORTHO05D000065 7.7e-06 54.7 38 65.8
BolC2t11842H Brassica oleracea HOM05D000313 ORTHO05D000065 7.7e-06 54.7 55 52.7
BolC3t19192H Brassica oleracea HOM05D000313 ORTHO05D000065 7.7e-06 54.7 69 42.0
BolC4t25080H Brassica oleracea HOM05D000313 ORTHO05D000065 7.7e-06 54.7 38 65.8
BolC7t40851H Brassica oleracea HOM05D000313 ORTHO05D000065 7.7e-06 54.7 37 70.3
BolC8t48120H Brassica oleracea HOM05D000313 ORTHO05D000065 7.7e-06 54.7 69 43.5
BolC9t56475H Brassica oleracea HOM05D000313 ORTHO05D000065 7.7e-06 54.7 69 46.4
BraA05t19470Z Brassica rapa HOM05D000313 ORTHO05D000065 7.7e-06 54.7 65 47.7


User provided reference genes

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