Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 6.5e-91 337.4 176 100.0
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 2.3e-88 328.9 176 97.7
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 2.3e-88 328.9 176 97.7
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 4.4e-87 324.7 176 96.0
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 2.2e-86 322.4 176 95.5
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 5.5e-82 307.8 180 90.6
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 2.4e-77 292.4 180 87.8
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 1.6e-76 289.7 180 87.8
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 2.7e-73 278.9 180 85.6
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 1.8e-72 276.2 180 85.0
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 1.8e-72 276.2 180 83.9
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 1.5e-71 273.1 180 83.3
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 3.0e-64 248.8 165 82.4
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 1.2e-55 220.3 177 71.8
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 5.4e-53 211.5 167 71.9
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 4.1e-37 158.7 149 56.4
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 2.7e-36 156.0 126 62.7
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 3.0e-35 152.5 126 62.7
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 1.1e-34 150.6 129 61.2
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 1.5e-34 150.2 127 61.4
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 1.9e-34 149.8 146 57.5
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 5.6e-34 148.3 114 64.9
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 7.3e-34 147.9 138 57.2
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 1.1e-32 144.1 125 56.8
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 2.4e-32 142.9 157 49.0
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 4.0e-32 142.1 159 48.4
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 8.9e-32 141.0 167 51.5
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 8.9e-32 141.0 149 51.0
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 2.0e-31 139.8 133 51.1
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 2.6e-31 139.4 116 63.8
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 3.4e-31 139.0 123 60.2
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 4.4e-31 138.7 160 46.9
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 6.4e-30 134.8 114 57.0
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 1.1e-29 134.0 132 52.3
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 1.4e-29 133.7 125 53.6
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.4e-29 133.7 125 53.6
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 3.2e-29 132.5 110 59.1
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 5.4e-29 131.7 112 59.8
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 5.4e-29 131.7 162 45.7
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 5.4e-29 131.7 125 52.8
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 7.1e-29 131.3 113 58.4
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 1.6e-28 130.2 115 56.5
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 2.7e-28 129.4 157 47.1
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 3.5e-28 129.0 115 55.7
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 6.0e-28 128.3 113 59.3
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 1.7e-27 126.7 123 52.8
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 8.7e-27 124.4 118 55.1
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.2e-25 120.6 104 60.6
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.2e-25 120.6 104 60.6
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.2e-25 120.6 104 60.6
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.2e-25 120.6 104 60.6
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 1.2e-25 120.6 94 63.8
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 1.2e-25 120.6 115 54.8
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.1e-25 119.8 104 59.6
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.8e-25 119.4 104 60.6
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 2.4e-24 116.3 90 62.2
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 2.4e-24 116.3 131 48.1
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 5.2e-24 115.2 90 64.4
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 6.9e-24 114.8 104 57.7
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 2.0e-23 113.2 114 48.2
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 2.0e-23 113.2 114 48.2
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 2.6e-23 112.8 250 33.2
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 5.8e-23 111.7 86 66.3
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 7.8e-20 101.3 104 55.8
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 7.8e-20 101.3 104 55.8
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 7.3e-18 94.7 156 38.5
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 5.8e-15 85.1 73 64.4
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 5.4e-13 78.6 65 56.9
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 7.9e-12 74.7 59 61.0
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 5.1e-11 72.0 67 58.2
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 4.3e-10 68.9 101 42.6


User provided reference genes

Program Settings