Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p12670 Brassica napus HOM05D004930 ORTHO05D006531 2.3e-207 725.3 367 100.0
BcaC08g43878 Brassica carinata HOM05D004930 ORTHO05D006531 2.6e-203 711.8 367 97.8
BolC6t36417H Brassica oleracea HOM05D004930 ORTHO05D006531 2.6e-203 711.8 367 97.8
A09p32980 Brassica napus HOM05D004930 ORTHO05D006531 7.2e-201 703.7 367 96.5
BraA09t38838Z Brassica rapa HOM05D004930 ORTHO05D006531 7.2e-201 703.7 367 96.5
BcaB07g32965 Brassica carinata HOM05D004930 ORTHO05D006531 1.8e-188 662.5 368 92.4
A08p08610 Brassica napus HOM05D004930 ORTHO05D006531 5.4e-172 607.8 373 83.1
Sp1g28730 Schrenkiella parvula HOM05D004930 ORTHO05D006531 5.4e-172 607.8 370 84.3
BraA08t32874Z Brassica rapa HOM05D004930 ORTHO05D006531 1.6e-171 606.3 372 82.8
BcaB04g17919 Brassica carinata HOM05D004930 ORTHO05D006531 3.0e-170 602.1 374 82.6
BcaC07g37556 Brassica carinata HOM05D004930 ORTHO05D006531 3.9e-170 601.7 373 82.6
AT1G33270 Arabidopsis thaliana HOM05D004930 ORTHO05D006531 6.6e-162 574.3 372 79.3
AL1G47670 Arabidopsis lyrata HOM05D004930 ORTHO05D006531 1.5e-161 573.2 368 79.1
Carub.0001s3147 Capsella rubella HOM05D004930 ORTHO05D006531 5.2e-159 564.7 375 78.4
CARHR032640 Cardamine hirsuta HOM05D004930 ORTHO05D006531 8.1e-152 540.8 384 74.5
BolC8t47898H Brassica oleracea HOM05D004930 ORTHO05D006531 3.4e-150 535.4 419 69.0
Aa31LG6G7800 Aethionema arabicum HOM05D004930 ORTHO05D006531 2.6e-142 509.2 370 69.2
Thhalv10007991m.g Eutrema salsugineum HOM05D004930 ORTHO05D006531 7.1e-140 501.1 320 82.2
THA.LOC104810264 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 8.4e-133 477.6 375 62.9
Cpa.g.sc2.5 Carica papaya HOM05D004930 ORTHO05D006531 1.5e-129 466.8 340 69.4
Potri.001G209500 Populus trichocarpa HOM05D004930 ORTHO05D006531 7.4e-129 464.5 346 67.1
CiPaw.06G148500 Carya illinoinensis HOM05D004930 ORTHO05D006531 1.5e-126 456.8 354 65.0
Ciclev10001315m.g Citrus clementina HOM05D004930 ORTHO05D006531 5.8e-126 454.9 331 68.0
Potri.003G020800 Populus trichocarpa HOM05D004930 ORTHO05D006531 7.6e-126 454.5 369 63.4
Thecc.02G040000 Theobroma cacao HOM05D004930 ORTHO05D006531 6.4e-125 451.4 336 67.6
FvH4_5g29680 Fragaria vesca HOM05D004930 ORTHO05D006531 8.4e-125 451.1 326 67.8
Atru.chr6.830 Acer truncatum HOM05D004930 ORTHO05D006531 1.9e-124 449.9 336 67.3
TWI59G0754 Tripterygium wilfordii HOM05D004930 ORTHO05D006531 2.4e-124 449.5 335 66.6
FAN13G1313 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.2e-124 449.1 326 67.5
Gohir.D01G000700 Gossypium hirsutum HOM05D004930 ORTHO05D006531 3.2e-124 449.1 337 66.2
COL.COLO4_17882 Corchorus olitorius HOM05D004930 ORTHO05D006531 4.2e-124 448.7 340 65.6
Cfa005536 Carpinus fangiana HOM05D004930 ORTHO05D006531 5.5e-124 448.4 355 63.7
Gohir.A01G001000 Gossypium hirsutum HOM05D004930 ORTHO05D006531 5.5e-124 448.4 337 66.5
Gorai.002G001200 Gossypium raimondii HOM05D004930 ORTHO05D006531 5.5e-124 448.4 337 66.5
CsaV3_3G018910 Cucumis sativus L. HOM05D004930 ORTHO05D006531 7.1e-124 448.0 380 61.1
Duzib248G0906 Durio zibethinus HOM05D004930 ORTHO05D006531 7.1e-124 448.0 339 66.1
FAN18G2930 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.1e-123 446.4 369 62.3
TAR628G0980 Trochodendron aralioides HOM05D004930 ORTHO05D006531 2.1e-123 446.4 360 63.9
MELO3C019485.2 Cucumis melo HOM05D004930 ORTHO05D006531 3.5e-123 445.7 326 67.2
Glyma.15G047800 Glycine max HOM05D004930 ORTHO05D006531 4.6e-123 445.3 357 62.7
VMungo0540G0757 Vigna mungo HOM05D004930 ORTHO05D006531 4.6e-123 445.3 366 62.3
Psat1g224280 Pisum sativum HOM05D004930 ORTHO05D006531 6.0e-123 444.9 323 68.1
RcHm_v2.0_Chr7g0223001 Rosa chinensis HOM05D004930 ORTHO05D006531 6.0e-123 444.9 325 67.4
GSVIVG01022999001 Vitis vinifera HOM05D004930 ORTHO05D006531 1.0e-122 444.1 339 66.7
Phvul.006G213000 Phaseolus vulgaris HOM05D004930 ORTHO05D006531 1.3e-122 443.7 367 61.9
TAR376G0678 Trochodendron aralioides HOM05D004930 ORTHO05D006531 1.3e-122 443.7 333 65.8
arahy.Tifrunner.gnm1.ann1.3M9FW6 Arachis hypogaea HOM05D004930 ORTHO05D006531 1.8e-122 443.4 320 67.8
Eucgr.G00613 Eucalyptus grandis HOM05D004930 ORTHO05D006531 2.3e-122 443.0 337 65.0
arahy.Tifrunner.gnm1.ann1.PLNC5S Arachis hypogaea HOM05D004930 ORTHO05D006531 3.0e-122 442.6 321 67.9
Duzib052G0674 Durio zibethinus HOM05D004930 ORTHO05D006531 3.0e-122 442.6 333 65.2
PGR042G0956 Punica granatum HOM05D004930 ORTHO05D006531 3.0e-122 442.6 344 64.8
TPR.G2103 Trifolium pratense HOM05D004930 ORTHO05D006531 3.0e-122 442.6 331 66.5
Ca_00086_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 3.9e-122 442.2 334 65.6
Lj6g0009653 Lotus japonicus HOM05D004930 ORTHO05D006531 3.9e-122 442.2 328 66.5
Medtr2g007650 Medicago truncatula HOM05D004930 ORTHO05D006531 3.9e-122 442.2 354 62.7
FAN04G2298 Fragaria x ananassa HOM05D004930 ORTHO05D006531 5.1e-122 441.8 338 65.4
CANSAT11G0917 Cannabis sativa HOM05D004930 ORTHO05D006531 6.7e-122 441.4 328 66.5
CSS0021494 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 8.7e-122 441.0 336 64.3
Rhsim05G0119100 Rhododendron simsii HOM05D004930 ORTHO05D006531 8.7e-122 441.0 340 64.4
PGSC0003DMG400023754 Solanum tuberosum HOM05D004930 ORTHO05D006531 1.1e-121 440.7 338 64.2
ClCG05G009760 Citrullus lanatus HOM05D004930 ORTHO05D006531 1.9e-121 439.9 324 66.0
Glyma.08G184900 Glycine max HOM05D004930 ORTHO05D006531 3.3e-121 439.1 364 60.7
Sopen01g046750 Solanum pennellii HOM05D004930 ORTHO05D006531 5.6e-121 438.3 338 64.5
Nn1g08650 Nelumbo nucifera HOM05D004930 ORTHO05D006531 7.4e-121 438.0 351 62.7
Solyc01g104310.3 Solanum lycopersicum HOM05D004930 ORTHO05D006531 9.6e-121 437.6 338 64.2
MD15G1421100 Malus domestica HOM05D004930 ORTHO05D006531 2.8e-120 436.0 327 66.1
Nitab4.5_0011195g0040 Nicotiana tabacum HOM05D004930 ORTHO05D006531 6.2e-120 434.9 339 64.0
SGA_v2.0_scaffold145G36067 Striga asiatica HOM05D004930 ORTHO05D006531 5.3e-119 431.8 334 64.1
SalBow6G0918 Salvia bowleyana HOM05D004930 ORTHO05D006531 1.2e-118 430.6 335 63.9
SalBow6G1869 Salvia bowleyana HOM05D004930 ORTHO05D006531 1.2e-118 430.6 335 63.9
Cc02_g22360 Coffea canephora HOM05D004930 ORTHO05D006531 2.0e-118 429.9 379 59.4
EL10Ac6g15372 Beta vulgaris HOM05D004930 ORTHO05D006531 2.6e-118 429.5 324 65.4
DCAR_001819 Daucus carota HOM05D004930 ORTHO05D006531 4.5e-118 428.7 381 59.8
HanXRQChr11g0333531 Helianthus annuus HOM05D004930 ORTHO05D006531 2.2e-117 426.4 340 61.8
Aqoxy5G02422 Aquilegia oxysepala HOM05D004930 ORTHO05D006531 2.9e-117 426.0 365 60.8
ECA236G4599 Erigeron canadensis HOM05D004930 ORTHO05D006531 4.9e-117 425.2 355 61.4
Lalb_Chr18g0060861 Lupinus albus HOM05D004930 ORTHO05D006531 4.9e-117 425.2 385 59.0
CAN.G1577.7 Capsicum annuum HOM05D004930 ORTHO05D006531 1.9e-116 423.3 278 72.7
CDE05G0822 Ceratophyllum demersum HOM05D004930 ORTHO05D006531 1.6e-115 420.2 372 57.8
Actinidia39050 Actinidia chinensis HOM05D004930 ORTHO05D006531 2.1e-115 419.9 342 62.9
Lsat_1_v5_gn_7_77761 Lactuca sativa HOM05D004930 ORTHO05D006531 1.8e-114 416.8 380 55.5
Hund04330 Selenicereus undatus HOM05D004930 ORTHO05D006531 1.8e-114 416.8 324 63.3
Lalb_Chr20g0123411 Lupinus albus HOM05D004930 ORTHO05D006531 2.3e-114 416.4 313 64.9
SEGI_13232 Sequoiadendron giganteum HOM05D004930 ORTHO05D006531 3.9e-114 415.6 333 62.5
ATR0684G093 Amborella trichopoda HOM05D004930 ORTHO05D006531 1.6e-112 410.2 344 61.6
Gohir.D08G010200 Gossypium hirsutum HOM05D004930 ORTHO05D006531 9.0e-111 404.4 364 56.9
Gorai.004G003500 Gossypium raimondii HOM05D004930 ORTHO05D006531 9.0e-111 404.4 364 56.9
Os11g0546300 Oryza sativa ssp. japonica HOM05D004930 ORTHO05D006531 2.6e-110 402.9 313 62.3
Gohir.A08G000149 Gossypium hirsutum HOM05D004930 ORTHO05D006531 3.4e-110 402.5 364 56.6
PSO170G4712 Papaver somniferum HOM05D004930 ORTHO05D006531 5.0e-109 398.7 384 55.5
Sabra03G0012100 Salix brachista HOM05D004930 ORTHO05D006531 8.5e-109 397.9 460 48.9
Sc07g0007240 Simmondsia chinensis HOM05D004930 ORTHO05D006531 1.1e-108 397.5 321 61.7
Sabra01G0161800 Salix brachista HOM05D004930 ORTHO05D006531 1.9e-108 396.7 396 56.1
Zm00001eb113740 Zea mays HOM05D004930 ORTHO05D006531 9.3e-108 394.4 324 60.5
QL02p098488 Quercus lobata HOM05D004930 ORTHO05D006531 1.3e-106 390.6 452 48.0
Lj5A251T70 Lonicera japonica HOM05D004930 ORTHO05D006531 1.5e-105 387.1 373 55.8
MBI03_g28294_MAGBIO Magnolia biondii HOM05D004930 ORTHO05D006531 1.9e-105 386.7 281 66.9
THA.LOC104813074 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 3.1e-103 379.4 331 58.6
Peaxi162Scf00011g00243 Petunia axillaris HOM05D004930 ORTHO05D006531 2.6e-102 376.3 331 58.3
Nitab4.5_0002245g0180 Nicotiana tabacum HOM05D004930 ORTHO05D006531 4.5e-102 375.6 323 59.4
Ah.03g147430 Amaranthus hybridus HOM05D004930 ORTHO05D006531 3.8e-101 372.5 326 56.7
vmacro01769 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 1.1e-100 370.9 334 57.2
SMO145G0200 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 1.1e-97 360.9 271 64.6
AUR62017811 Chenopodium quinoa HOM05D004930 ORTHO05D006531 3.7e-96 355.9 297 60.9
AagrBONN_evm.TU.Sc2ySwM_344.3941 Anthoceros agrestis HOM05D004930 ORTHO05D006531 5.0e-93 345.5 264 65.2
Mapoly0101s0012 Marchantia polymorpha HOM05D004930 ORTHO05D006531 5.5e-92 342.0 258 62.8
Dinv19356 Davidia involucrata HOM05D004930 ORTHO05D006531 2.7e-91 339.7 273 63.4
Oeu012747.1 Olea europaea HOM05D004930 ORTHO05D006531 3.9e-90 335.9 215 74.0
Pp3c11_20720 Physcomitrium patens HOM05D004930 ORTHO05D006531 3.9e-90 335.9 283 60.8
Ca_29925_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 6.7e-90 335.1 218 72.9
Rhsim11G0130300 Rhododendron simsii HOM05D004930 ORTHO05D006531 3.3e-89 332.8 213 72.3
HPP92_002187 Vanilla planifolia HOM05D004930 ORTHO05D006531 3.5e-86 322.8 299 57.2
Manes.07G014400 Manihot esculenta HOM05D004930 ORTHO05D006531 3.7e-80 302.8 232 68.5
vmacro19901 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 1.0e-77 294.7 547 36.0
HanXRQChr02g0058791 Helianthus annuus HOM05D004930 ORTHO05D006531 2.5e-76 290.0 196 68.4
Sed0026856 Sechium edule HOM05D004930 ORTHO05D006531 5.5e-76 288.9 219 66.7
Prupe.1G566300 Prunus persica HOM05D004930 ORTHO05D006531 9.4e-76 288.1 219 67.1
AagrBONN_evm.TU.Sc2ySwM_344.3947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.2e-74 282.3 283 51.2
SMO139G0053 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 2.6e-73 280.0 214 63.1
AUR62003501 Chenopodium quinoa HOM05D004930 ORTHO05D006531 2.2e-72 276.9 213 62.9
CBR_g22336 Chara braunii HOM05D004930 ORTHO05D006531 1.0e-69 268.1 239 57.3
CSS0024235 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 3.5e-62 243.0 329 45.3
Haze_01635 Corylus avellana HOM05D004930 ORTHO05D006531 1.6e-59 234.2 211 60.2
Cre12.g530950 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 1.8e-42 177.6 257 40.1
Cre03.g195500 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 2.3e-37 160.6 264 35.6
MCO11G494 Micromonas commoda HOM05D004930 ORTHO05D006531 5.4e-31 139.4 290 34.5
PRCOL_00005484 Prasinoderma coloniale HOM05D007321 ORTHO05D009244 9.0e-26 122.1 252 32.9
CARHR054090 Cardamine hirsuta HOM05D004930 ORTHO05D006531 1.3e-24 118.2 83 74.7
AUR62003500 Chenopodium quinoa HOM05D004930 ORTHO05D006531 7.8e-22 109.0 121 50.4
Migut.N01037 Erythranthe guttata HOM05D004930 ORTHO05D006531 9.6e-20 102.1 129 45.7
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 1.3e-19 101.7 100 58.0
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 2.8e-19 100.5 102 54.9
FAN06G5097 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-18 98.6 64 76.6
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-18 98.6 64 75.0
FAN25G1134 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-18 98.6 64 76.6
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 2.6e-17 94.0 94 54.3
FAN01G0209 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.4e-17 93.6 64 70.3
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.4e-17 93.6 64 70.3
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 3.4e-17 93.6 94 54.3
FAN17G1951 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.4e-17 93.6 64 70.3
FAN17G1425 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.3e-16 91.7 64 68.8
Cre09.g400219 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 1.5e-12 78.2 166 31.3
PRCOL_00003693 Prasinoderma coloniale HOM05D004930 ORTHO05D006531 3.3e-12 77.0 156 36.5
MCO01G237 Micromonas commoda HOM05D004930 ORTHO05D006531 7.4e-12 75.9 231 27.3
Ca_20167_v3 Cicer arietinum L. HOM05D004930 ORTHO05D000002 1.4e-10 71.6 48 70.8
CARHR054100 Cardamine hirsuta HOM05D004930 ORTHO05D006531 2.4e-10 70.9 57 63.2
CBR_g45217 Chara braunii HOM05D004930 ORTHO05D028745 2.0e-09 67.8 170 30.6
Cre10.g431350 Chlamydomonas reinhardtii HOM05D039848 ORTHO05D028745 1.7e-08 64.7 161 29.8
Cre26.g756847 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D028745 4.2e-07 60.1 173 30.6


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