Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p12490 Brassica napus HOM05D004375 ORTHO05D008558 0.0e+00 1276.2 678 100.0
BcaC04g21457 Brassica carinata HOM05D004375 ORTHO05D008558 2.0e-297 1025.4 746 78.3
C02p27470 Brassica napus HOM05D004375 ORTHO05D008558 5.7e-268 927.5 672 78.9
BolC9t56012H Brassica oleracea HOM05D004375 ORTHO05D008558 1.4e-266 922.9 724 74.0
C09p31560 Brassica napus HOM05D004375 ORTHO05D008558 5.9e-265 917.5 732 73.4
BcaC04g23067 Brassica carinata HOM05D004375 ORTHO05D008558 3.4e-236 822.0 722 68.4
BcaC02g09621 Brassica carinata HOM05D004375 ORTHO05D008558 2.2e-235 819.3 720 71.2
BcaC03g15172 Brassica carinata HOM05D004375 ORTHO05D008558 1.8e-218 763.1 677 64.7
BolC9t56614H Brassica oleracea HOM05D004375 ORTHO05D031763 1.8e-218 763.1 720 62.9
BcaC02g10128 Brassica carinata HOM05D004375 ORTHO05D008558 2.4e-173 613.2 650 58.0
BcaC04g20927 Brassica carinata HOM05D004375 ORTHO05D031763 1.6e-166 590.5 722 52.4
BcaB07g32718 Brassica carinata HOM05D004375 ORTHO05D008558 5.7e-119 432.6 710 42.0
BcaB02g10241 Brassica carinata HOM05D004375 ORTHO05D008558 7.5e-119 432.2 744 40.7
BolC4t26057H Brassica oleracea HOM05D004375 ORTHO05D008558 5.5e-114 416.0 379 71.0
BcaB07g33031 Brassica carinata HOM05D004375 ORTHO05D008558 1.8e-104 384.4 713 39.1
C07p19300 Brassica napus HOM05D004375 ORTHO05D008558 3.7e-102 376.7 705 37.6
BcaC03g15201 Brassica carinata HOM05D004375 ORTHO05D008558 8.3e-102 375.6 706 37.7
BolC2t08831H Brassica oleracea HOM05D004375 ORTHO05D008558 2.0e-100 370.9 715 37.9
BcaB06g26290 Brassica carinata HOM05D004375 ORTHO05D008558 5.9e-100 369.4 708 37.7
C02p28420 Brassica napus HOM05D004375 ORTHO05D008558 4.7e-97 359.8 705 37.0
C02p27860 Brassica napus HOM05D004375 ORTHO05D008558 6.2e-97 359.4 716 37.3
BcaB03g15947 Brassica carinata HOM05D004375 ORTHO05D008558 1.4e-96 358.2 680 37.5
A02p26110 Brassica napus HOM05D004375 ORTHO05D008558 1.8e-96 357.8 672 36.3
BcaB04g17136 Brassica carinata HOM05D004375 ORTHO05D008558 1.5e-95 354.8 703 37.6
BolC1t03873H Brassica oleracea HOM05D004375 ORTHO05D008558 3.4e-95 353.6 353 58.1
BcaC06g35536 Brassica carinata HOM05D004375 ORTHO05D008558 4.9e-94 349.7 715 36.4
BcaB07g32629 Brassica carinata HOM05D004375 ORTHO05D008558 1.1e-93 348.6 643 42.8
BcaB01g03503 Brassica carinata HOM05D004375 ORTHO05D008558 1.4e-93 348.2 730 36.6
BcaB05g23703 Brassica carinata HOM05D004375 ORTHO05D008558 3.2e-93 347.1 731 36.3
A09p17280 Brassica napus HOM05D004375 ORTHO05D008558 3.2e-93 347.1 669 36.3
A01p20690 Brassica napus HOM05D004375 ORTHO05D008558 1.4e-88 331.6 687 35.5
BcaB05g23866 Brassica carinata HOM05D004375 ORTHO05D008558 5.8e-87 326.2 668 37.0
C01p14310 Brassica napus HOM05D004375 ORTHO05D008558 1.7e-86 324.7 468 42.5
A02p20030 Brassica napus HOM05D004375 ORTHO05D008558 1.1e-85 322.0 469 41.2
A03p68120 Brassica napus HOM05D004375 ORTHO05D008558 2.5e-82 310.8 536 39.2
BcaB02g10812 Brassica carinata HOM05D004375 ORTHO05D008558 6.2e-81 306.2 731 34.1
BcaB01g04420 Brassica carinata HOM05D004375 ORTHO05D008558 8.9e-80 302.4 713 34.6
BcaB05g21622 Brassica carinata HOM05D004375 ORTHO05D008558 5.8e-79 299.7 514 41.2
BcaB05g23104 Brassica carinata HOM05D004375 ORTHO05D008558 1.7e-78 298.1 715 38.5
BcaB05g23325 Brassica carinata HOM05D004375 ORTHO05D008558 1.7e-78 298.1 374 46.5
C09p37810 Brassica napus HOM05D004375 ORTHO05D031763 5.4e-77 293.1 235 68.9
BcaB05g22558 Brassica carinata HOM05D004375 ORTHO05D008558 2.1e-76 291.2 681 34.2
BcaB05g23011 Brassica carinata HOM05D004375 ORTHO05D008558 5.1e-75 286.6 724 34.3
BcaC03g15251 Brassica carinata HOM05D004375 ORTHO05D008558 9.9e-71 272.3 714 32.6
BraA07t28625Z Brassica rapa HOM05D004375 ORTHO05D008558 3.5e-68 263.8 727 31.9
BcaB01g03719 Brassica carinata HOM05D004375 ORTHO05D008558 1.3e-67 261.9 695 37.4
A05p27930 Brassica napus HOM05D004375 ORTHO05D008558 3.0e-67 260.8 221 54.8
BcaB08g35442 Brassica carinata HOM05D004375 ORTHO05D008558 1.6e-65 255.0 363 41.6
BcaB02g06988 Brassica carinata HOM05D004375 ORTHO05D008558 8.1e-65 252.7 366 43.4
BcaB07g32958 Brassica carinata HOM05D004375 ORTHO05D008558 9.9e-63 245.7 678 31.9
C01p39240 Brassica napus HOM05D004375 ORTHO05D008558 9.9e-63 245.7 143 83.2
BcaC09g49739 Brassica carinata HOM05D004375 ORTHO05D008558 1.9e-61 241.5 385 39.5
BcaB06g28882 Brassica carinata HOM05D004375 ORTHO05D008558 4.2e-61 240.4 368 39.4
BcaC01g06196 Brassica carinata HOM05D004375 ORTHO05D008558 5.4e-61 240.0 696 31.5
C01p28010 Brassica napus HOM05D004375 ORTHO05D008558 7.1e-61 239.6 275 45.1
BraA09t39239Z Brassica rapa HOM05D004375 ORTHO05D008558 3.5e-60 237.3 690 32.8
A03p67640 Brassica napus HOM05D004375 ORTHO05D008558 1.5e-58 231.9 309 47.6
BolC2t08886H Brassica oleracea HOM05D004375 ORTHO05D008558 5.6e-58 229.9 649 31.9
BcaC03g15253 Brassica carinata HOM05D004375 ORTHO05D008558 1.2e-55 222.2 355 39.2
BcaB02g09193 Brassica carinata HOM05D004375 ORTHO05D008558 9.3e-53 212.6 372 38.7
BraA06t26008Z Brassica rapa HOM05D004375 ORTHO05D008558 4.6e-52 210.3 321 37.7
C01p25790 Brassica napus HOM05D004375 ORTHO05D008558 5.1e-51 206.8 565 31.9
C02p50680 Brassica napus HOM05D004375 ORTHO05D008558 6.7e-51 206.5 305 53.8
A09p37300 Brassica napus HOM05D004375 ORTHO05D008558 1.9e-50 204.9 587 32.7
A07p43390 Brassica napus HOM05D004375 ORTHO05D008558 4.3e-50 203.8 322 37.6
BcaB05g21909 Brassica carinata HOM05D004375 ORTHO05D008558 2.1e-44 184.9 584 35.3
A10p10580 Brassica napus HOM05D004375 ORTHO05D008558 2.7e-44 184.5 355 34.6
BolC3t21361H Brassica oleracea HOM05D004375 ORTHO05D008558 7.4e-42 176.4 558 30.5
A09p37230 Brassica napus HOM05D004375 ORTHO05D008558 4.1e-40 170.6 525 31.8
A05p24130 Brassica napus HOM05D004375 ORTHO05D008558 2.9e-38 164.5 381 31.2
BcaB05g24368 Brassica carinata HOM05D004375 ORTHO05D008558 3.2e-37 161.0 166 50.0
BraA09t39238Z Brassica rapa HOM05D004375 ORTHO05D008558 2.1e-36 158.3 523 31.2
BolC7t41868H Brassica oleracea HOM05D004375 ORTHO05D008558 1.0e-35 156.0 519 31.2
BcaC09g51321 Brassica carinata HOM05D004375 ORTHO05D008558 4.8e-33 147.1 319 35.1
C01p25780 Brassica napus HOM05D004375 ORTHO05D008558 1.2e-31 142.5 115 62.6
C01p39250 Brassica napus HOM05D004375 ORTHO05D008558 2.9e-30 137.9 224 44.2
BolC2t11150H Brassica oleracea HOM05D004375 ORTHO05D106812 8.8e-27 126.3 74 79.7
BolC4t24807H Brassica oleracea HOM05D004375 ORTHO05D008558 6.3e-25 120.2 66 93.9
BolC1t02734H Brassica oleracea HOM05D004375 ORTHO05D008558 3.1e-24 117.9 109 53.2
BolC9t54141H Brassica oleracea HOM05D004375 ORTHO05D008558 3.1e-24 117.9 66 92.4
BcaB03g16500 Brassica carinata HOM05D004375 ORTHO05D008558 9.1e-24 116.3 499 31.5
A10p33190 Brassica napus HOM05D004375 ORTHO05D008558 2.0e-23 115.2 118 50.0
BcaB05g24722 Brassica carinata HOM05D004375 ORTHO05D091882 4.5e-23 114.0 492 33.3
BcaC03g14687 Brassica carinata HOM05D004375 ORTHO05D008558 5.9e-23 113.6 547 27.1
C03p10830 Brassica napus HOM05D004375 ORTHO05D008558 2.2e-22 111.7 327 30.0
BraA03t15607Z Brassica rapa HOM05D004375 ORTHO05D008558 2.5e-21 108.2 109 48.6
BcaB07g32586 Brassica carinata HOM05D004375 ORTHO05D016090 3.0e-19 101.3 204 31.4
BcaB07g32109 Brassica carinata HOM05D004375 ORTHO05D008558 2.4e-16 91.7 69 66.7
C01p30040 Brassica napus HOM05D004375 ORTHO05D016090 4.1e-16 90.9 178 29.8
BolC1t02944H Brassica oleracea HOM05D004375 ORTHO05D016090 4.1e-16 90.9 178 29.8
BolC3t21360H Brassica oleracea HOM05D004375 ORTHO05D008558 5.3e-16 90.5 66 62.1
Carub.0009s0004 Capsella rubella HOM05D000675 ORTHO05D000395 3.2e-13 81.3 208 27.9
A10p33200 Brassica napus HOM05D004375 ORTHO05D008558 2.1e-12 78.6 266 32.7
BcaB01g04897 Brassica carinata HOM05D000675 ORTHO05D000395 3.6e-12 77.8 201 27.9
Carub.0004s0647 Capsella rubella HOM05D000675 ORTHO05D000395 8.0e-12 76.6 190 25.8
BcaC08g43027 Brassica carinata HOM05D000675 ORTHO05D003044 8.8e-11 73.2 175 30.9
A09p24250 Brassica napus HOM05D004375 ORTHO05D008558 8.8e-11 73.2 116 43.1
C01p14320 Brassica napus HOM05D004375 ORTHO05D008558 2.0e-10 72.0 129 38.0
BcaC02g12835 Brassica carinata HOM05D000675 ORTHO05D000395 4.4e-10 70.9 198 27.8
C04p39370 Brassica napus HOM05D000675 ORTHO05D000395 4.4e-10 70.9 198 27.8
BolC4t25504H Brassica oleracea HOM05D000675 ORTHO05D000395 4.4e-10 70.9 198 27.8
BraA02t07607Z Brassica rapa HOM05D004375 ORTHO05D008558 5.7e-10 70.5 246 30.9
BraA01t02215Z Brassica rapa HOM05D000675 ORTHO05D003044 7.5e-10 70.1 194 26.8
BraA09t38942Z Brassica rapa HOM05D000675 ORTHO05D003044 7.5e-10 70.1 197 25.9
Carub.0001s3338 Capsella rubella HOM05D000675 ORTHO05D000395 7.5e-10 70.1 181 26.5
SpUn0365_0010 Schrenkiella parvula HOM05D011363 ORTHO05D003044 1.3e-09 69.3 176 26.1
BcaB01g01752 Brassica carinata HOM05D000675 ORTHO05D003044 1.7e-09 68.9 177 28.8
BcaC01g05607 Brassica carinata HOM05D000675 ORTHO05D000395 3.7e-09 67.8 162 31.5
BolC3t14837H Brassica oleracea HOM05D000675 ORTHO05D000395 3.7e-09 67.8 162 31.5
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 6.3e-09 67.0 195 27.2
C07p30940 Brassica napus HOM05D001038 ORTHO05D014932 8.2e-09 66.6 109 33.0
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 8.2e-09 66.6 109 33.0
SpUn1480_0010 Schrenkiella parvula HOM05D004375 ORTHO05D008558 8.2e-09 66.6 86 34.9
Carub.0001s3343 Capsella rubella HOM05D000675 ORTHO05D000395 1.4e-08 65.9 131 29.0
BolC1t02527H Brassica oleracea HOM05D004375 ORTHO05D008558 2.4e-08 65.1 121 38.0
AL9U11170 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 3.1e-08 64.7 108 34.3
A02p36630 Brassica napus HOM05D000675 ORTHO05D003044 9.1e-08 63.2 184 25.5
C03p78170 Brassica napus HOM05D000675 ORTHO05D003044 9.1e-08 63.2 162 29.6
BraA02t08658Z Brassica rapa HOM05D000675 ORTHO05D003044 9.1e-08 63.2 184 25.5
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 1.2e-07 62.8 179 28.5
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 2.0e-07 62.0 172 27.3
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 2.0e-07 62.0 172 27.3
BraA02t08415Z Brassica rapa HOM05D000675 ORTHO05D003044 2.0e-07 62.0 186 26.9
A01p24790 Brassica napus HOM05D000675 ORTHO05D011634 3.5e-07 61.2 188 26.1
C06p00840 Brassica napus HOM05D001038 ORTHO05D010946 3.5e-07 61.2 225 21.3
A09p33960 Brassica napus HOM05D000675 ORTHO05D003044 4.5e-07 60.8 132 28.8
Carub.0029s0001 Capsella rubella HOM05D000675 ORTHO05D000395 4.5e-07 60.8 189 22.8
BcaB07g32139 Brassica carinata HOM05D000675 ORTHO05D000395 7.7e-07 60.1 182 24.2
Aa31LG10G13150 Aethionema arabicum HOM05D000471 ORTHO05D000199 1.0e-06 59.7 193 22.8
BcaC03g14544 Brassica carinata HOM05D001038 ORTHO05D010946 1.0e-06 59.7 272 20.6
AL4G19890 Arabidopsis lyrata HOM05D000675 ORTHO05D003044 1.3e-06 59.3 135 29.6
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 1.3e-06 59.3 178 28.1
Aa31LG9G6340 Aethionema arabicum HOM05D000471 ORTHO05D000199 1.7e-06 58.9 195 22.1
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 1.7e-06 58.9 162 29.0
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 1.7e-06 58.9 105 34.3
A01p19480 Brassica napus HOM05D000675 ORTHO05D003044 1.7e-06 58.9 184 24.5
C09p39680 Brassica napus HOM05D001038 ORTHO05D010763 1.7e-06 58.9 105 34.3
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 1.7e-06 58.9 161 24.2
Aa31LG1G3610 Aethionema arabicum HOM05D001285 ORTHO05D000199 2.2e-06 58.5 195 22.1
Aa31LG2G16260 Aethionema arabicum HOM05D001285 ORTHO05D000199 2.2e-06 58.5 195 22.1
Aa31LG6G12780 Aethionema arabicum HOM05D001285 ORTHO05D000199 2.2e-06 58.5 195 22.1
AT2G07240 Arabidopsis thaliana HOM05D001038 ORTHO05D010763 6.5e-06 57.0 178 25.3
A04p09980 Brassica napus HOM05D000675 ORTHO05D021717 6.5e-06 57.0 273 24.9
BraA04t16659Z Brassica rapa HOM05D000675 ORTHO05D021717 6.5e-06 57.0 273 24.9


User provided reference genes

Program Settings