Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p12350 Brassica napus HOM05D013952 ORTHO05D014536 1.2e-62 243.8 120 100.0
BolC6t36386H Brassica oleracea HOM05D013952 ORTHO05D014536 3.4e-57 225.7 117 95.7
C02p46150 Brassica napus HOM05D013952 ORTHO05D014536 4.4e-57 225.3 119 95.8
BolC4t25751H Brassica oleracea HOM05D013952 ORTHO05D014536 6.3e-56 221.5 122 91.0
BolC2t10672H Brassica oleracea HOM05D013952 ORTHO05D014536 5.0e-53 211.8 117 90.6
C04p41730 Brassica napus HOM05D013952 ORTHO05D014536 2.7e-51 206.1 118 88.1
BraA02t08520Z Brassica rapa HOM05D013952 ORTHO05D014536 1.3e-40 170.6 89 96.6
A03p43040 Brassica napus HOM05D013952 ORTHO05D014536 1.2e-35 154.1 118 70.3
A05p27370 Brassica napus HOM05D013952 ORTHO05D014536 1.1e-26 124.4 120 57.5
BcaC07g39773 Brassica carinata HOM05D000215 ORTHO05D001676 4.7e-11 72.4 59 62.7
Zm00001eb397640 Zea mays HOM05D013952 ORTHO05D014536 1.8e-10 70.5 60 63.3
vmacro14522 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 2.4e-10 70.1 56 62.5
BcaB06g28256 Brassica carinata HOM05D000215 ORTHO05D001676 4.0e-10 69.3 59 61.0
SGA_v2.0_scaffold38G15075 Striga asiatica HOM05D000215 ORTHO05D005049 6.9e-10 68.6 48 75.0
Dinv05527 Davidia involucrata HOM05D000215 ORTHO05D004644 8.9e-10 68.2 60 60.0
SGA_v2.0_scaffold39G15157 Striga asiatica HOM05D000215 ORTHO05D005049 9.9e-09 64.7 52 59.6
Medtr1g093965 Medicago truncatula HOM05D000215 ORTHO05D001676 2.9e-08 63.2 74 45.9
Medtr1g093995 Medicago truncatula HOM05D000215 ORTHO05D001676 2.9e-08 63.2 74 45.9
A04p34760 Brassica napus HOM05D000001 ORTHO05D002611 3.8e-08 62.8 34 88.2
Actinidia36676 Actinidia chinensis HOM05D000215 ORTHO05D005049 6.4e-08 62.0 36 83.3
unitig_24.g30593 Utricularia gibba HOM05D000215 ORTHO05D005049 6.4e-08 62.0 40 70.0
A05p18160 Brassica napus HOM05D000001 ORTHO05D002611 8.4e-08 61.6 34 88.2
BraA07t30688Z Brassica rapa HOM05D013952 ORTHO05D014536 2.4e-07 60.1 79 48.1
SalBow5G3737 Salvia bowleyana HOM05D001760 ORTHO05D001691 9.3e-07 58.2 59 55.9
Dinv04102 Davidia involucrata HOM05D000215 ORTHO05D002282 7.8e-06 55.1 59 50.8


User provided reference genes

Program Settings