Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p10340 Brassica napus HOM05D004137 ORTHO05D004804 6.8e-61 237.3 130 100.0
BolC6t36110H Brassica oleracea HOM05D004137 ORTHO05D004804 6.8e-61 237.3 130 100.0
BcaC08g43620 Brassica carinata HOM05D004137 ORTHO05D004804 1.3e-59 233.0 130 95.4
BraA06t23238Z Brassica rapa HOM05D004137 ORTHO05D004804 3.4e-52 208.4 131 84.0
A06p00220 Brassica napus HOM05D004137 ORTHO05D004804 8.6e-48 193.7 109 89.9
Thhalv10011858m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 9.5e-39 163.7 132 75.8
CARHR045030 Cardamine hirsuta HOM05D004137 ORTHO05D004804 7.5e-36 154.1 130 64.6
AL1G63420 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 3.5e-33 145.2 133 64.7
Sp1g41045 Schrenkiella parvula HOM05D004137 ORTHO05D004804 8.6e-32 140.6 131 68.7
BcaB04g16959 Brassica carinata HOM05D004137 ORTHO05D004804 2.1e-30 136.0 72 88.9
BolC3t21580H Brassica oleracea HOM05D004137 ORTHO05D004804 1.5e-28 129.8 71 83.1
BcaC01g01518 Brassica carinata HOM05D004137 ORTHO05D004804 2.6e-28 129.0 71 83.1
A08p00680 Brassica napus HOM05D004137 ORTHO05D004804 9.9e-28 127.1 71 80.3
BraA08t32126Z Brassica rapa HOM05D004137 ORTHO05D004804 9.9e-28 127.1 71 80.3
AT1G55365 Arabidopsis thaliana HOM05D004137 ORTHO05D004804 1.3e-27 126.7 131 59.5
C03p92680 Brassica napus HOM05D004137 ORTHO05D004804 1.3e-27 126.7 71 81.7
Carub.0001s4388 Capsella rubella HOM05D004137 ORTHO05D004804 1.3e-27 126.7 134 56.7
BcaC08g44196 Brassica carinata HOM05D004137 ORTHO05D004804 6.6e-24 114.4 72 72.2
BolC6t36802H Brassica oleracea HOM05D004137 ORTHO05D004804 6.6e-24 114.4 72 72.2
A05p17500 Brassica napus HOM05D004137 ORTHO05D004804 7.3e-23 110.9 72 70.8
BcaB02g10824 Brassica carinata HOM05D004137 ORTHO05D004804 3.6e-22 108.6 72 72.2
THA.LOC104810322 Tarenaya hassleriana HOM05D004137 ORTHO05D004804 1.2e-20 103.6 124 58.1
Aa31LG10G1170 Aethionema arabicum HOM05D004137 ORTHO05D004804 9.9e-20 100.5 135 54.1
QL01p003617 Quercus lobata HOM05D004137 ORTHO05D004804 1.9e-15 86.3 72 55.6
CANSAT11G0501 Cannabis sativa HOM05D004137 ORTHO05D004804 5.6e-15 84.7 69 56.5
Prupe.6G003100 Prunus persica HOM05D004137 ORTHO05D004804 9.6e-15 84.0 69 55.1
Atru.chr3.2107 Acer truncatum HOM05D004137 ORTHO05D004804 1.6e-14 83.2 69 53.6
A05p35990 Brassica napus HOM05D004137 ORTHO05D004804 2.8e-14 82.4 67 59.7
BraA05t22405Z Brassica rapa HOM05D004137 ORTHO05D004804 2.8e-14 82.4 67 59.7
Manes.15G109500 Manihot esculenta HOM05D004137 ORTHO05D004804 4.8e-14 81.6 72 48.6
Haze_22939 Corylus avellana HOM05D004137 ORTHO05D004804 1.1e-13 80.5 68 52.9
Manes.03G087303 Manihot esculenta HOM05D004137 ORTHO05D004804 1.4e-13 80.1 73 46.6
TWI34G1879 Tripterygium wilfordii HOM05D004137 ORTHO05D004804 1.4e-13 80.1 68 51.5
MD11G1003200 Malus domestica HOM05D004137 ORTHO05D004804 2.4e-13 79.3 70 51.4
BraA05t20644Z Brassica rapa HOM05D004137 ORTHO05D004804 4.0e-13 78.6 49 67.3
Cpa.g.c44905 Carica papaya HOM05D004137 ORTHO05D004804 6.9e-13 77.8 62 53.2
Hma1.2p1_0241F.1_g100550 Hydrangea macrophylla HOM05D004137 ORTHO05D004804 6.9e-13 77.8 75 45.3
Potri.001G003500 Populus trichocarpa HOM05D004137 ORTHO05D004804 1.2e-12 77.0 73 50.7
Thhalv10022151m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 2.6e-12 75.9 93 50.5
FAN16G1350 Fragaria x ananassa HOM05D004137 ORTHO05D004804 2.6e-12 75.9 69 52.2
FAN21G2465 Fragaria x ananassa HOM05D004137 ORTHO05D004804 2.6e-12 75.9 69 52.2
Sp3g11710 Schrenkiella parvula HOM05D004137 ORTHO05D004804 2.6e-12 75.9 59 57.6
TWI60G1175 Tripterygium wilfordii HOM05D004137 ORTHO05D004804 2.6e-12 75.9 67 49.3
RcHm_v2.0_Chr5g0083831 Rosa chinensis HOM05D004137 ORTHO05D004804 3.4e-12 75.5 69 50.7
AL3G25410 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 9.9e-12 73.9 126 46.0
FAN25G2990 Fragaria x ananassa HOM05D004137 ORTHO05D004804 1.3e-11 73.6 69 50.7
CiPaw.13G177400 Carya illinoinensis HOM05D004137 ORTHO05D004804 2.2e-11 72.8 70 47.1
Potri.003G221500 Populus trichocarpa HOM05D004137 ORTHO05D004804 2.9e-11 72.4 76 44.7
HanXRQChr02g0057501 Helianthus annuus HOM05D004137 ORTHO05D004804 4.9e-11 71.6 70 47.1
Lsat_1_v5_gn_2_50221 Lactuca sativa HOM05D004137 ORTHO05D004804 4.9e-11 71.6 129 37.2
CARHR088170 Cardamine hirsuta HOM05D004137 ORTHO05D004804 6.4e-11 71.2 66 53.0
Ciclev10017215m.g Citrus clementina HOM05D004137 ORTHO05D004804 6.4e-11 71.2 70 50.0
Carub.0003s1297 Capsella rubella HOM05D004137 ORTHO05D004804 8.4e-11 70.9 126 42.9
Cc01_g00130 Coffea canephora HOM05D004137 ORTHO05D004804 8.4e-11 70.9 68 47.1
AL7G26620 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 1.9e-10 69.7 71 45.1
CARHR233900 Cardamine hirsuta HOM05D004137 ORTHO05D004804 1.9e-10 69.7 68 45.6
Nitab4.5_0000528g0100 Nicotiana tabacum HOM05D004137 ORTHO05D004804 1.9e-10 69.7 64 46.9
Nitab4.5_0005935g0010 Nicotiana tabacum HOM05D004137 ORTHO05D004804 1.9e-10 69.7 64 46.9
CSS0017288 Camellia sinensis var. sinensis HOM05D004137 ORTHO05D004804 3.2e-10 68.9 63 49.2
Lsat_1_v5_gn_1_68820 Lactuca sativa HOM05D004137 ORTHO05D004804 4.2e-10 68.6 70 45.7
Medtr8g088460 Medicago truncatula HOM05D004137 ORTHO05D004804 4.2e-10 68.6 77 49.4
Eucgr.B03601 Eucalyptus grandis HOM05D004137 ORTHO05D004804 5.4e-10 68.2 65 43.1
FAN11G0915 Fragaria x ananassa HOM05D004137 ORTHO05D004804 7.1e-10 67.8 63 52.4
Nn7g35858 Nelumbo nucifera HOM05D004137 ORTHO05D004804 7.1e-10 67.8 75 42.7
QL04p040762 Quercus lobata HOM05D004137 ORTHO05D004804 7.1e-10 67.8 61 49.2
Sp7g24280 Schrenkiella parvula HOM05D004137 ORTHO05D004804 7.1e-10 67.8 68 45.6
TAR623G1005 Trochodendron aralioides HOM05D004137 ORTHO05D004804 7.1e-10 67.8 71 43.7
Solyc06g064610.1 Solanum lycopersicum HOM05D004137 ORTHO05D004804 9.3e-10 67.4 70 45.7
Carub.0007s1461 Capsella rubella HOM05D004137 ORTHO05D004804 1.2e-09 67.0 68 44.1
DCAR_023854 Daucus carota HOM05D004137 ORTHO05D004804 1.2e-09 67.0 77 40.3
FvH4_3g45760 Fragaria vesca HOM05D004137 ORTHO05D004804 1.6e-09 66.6 63 50.8
HanXRQChr01g0021421 Helianthus annuus HOM05D004137 ORTHO05D004804 1.6e-09 66.6 63 46.0
Sopen06g023090 Solanum pennellii HOM05D004137 ORTHO05D004804 1.6e-09 66.6 70 45.7
MD03G1003400 Malus domestica HOM05D004137 ORTHO05D004804 2.1e-09 66.2 62 48.4
AT3G13500 Arabidopsis thaliana HOM05D004137 ORTHO05D004804 2.7e-09 65.9 130 47.7
PGSC0003DMG400037247 Solanum tuberosum HOM05D004137 ORTHO05D004804 2.7e-09 65.9 64 43.8
Nn2g15861 Nelumbo nucifera HOM05D004137 ORTHO05D004804 3.5e-09 65.5 69 46.4
PGSC0003DMG400033149 Solanum tuberosum HOM05D004137 ORTHO05D004804 3.5e-09 65.5 70 45.7
C07p54810 Brassica napus HOM05D004137 ORTHO05D004804 4.6e-09 65.1 68 42.6
BolC7t45970H Brassica oleracea HOM05D004137 ORTHO05D004804 4.6e-09 65.1 68 42.6
PGR102G2770 Punica granatum HOM05D004137 ORTHO05D004804 6.0e-09 64.7 68 41.2
Thhalv10027319m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 1.0e-08 63.9 68 42.6
BraA03t14731Z Brassica rapa HOM05D004137 ORTHO05D004804 1.3e-08 63.5 68 41.2
BcaC06g32758 Brassica carinata HOM05D004137 ORTHO05D004804 1.7e-08 63.2 68 42.6
THA.LOC104811721 Tarenaya hassleriana HOM05D004137 ORTHO05D004804 2.3e-08 62.8 127 32.3
Psat7g063840 Pisum sativum HOM05D004137 ORTHO05D004804 3.9e-08 62.0 69 46.4
Solyc11g042440.1 Solanum lycopersicum HOM05D004137 ORTHO05D004804 5.1e-08 61.6 64 42.2
AT5G56520 Arabidopsis thaliana HOM05D004137 ORTHO05D004804 6.6e-08 61.2 68 39.7
ECA248G0157 Erigeron canadensis HOM05D004137 ORTHO05D004804 6.6e-08 61.2 63 41.3
A03p56610 Brassica napus HOM05D004137 ORTHO05D004804 8.7e-08 60.8 68 41.2
Sopen11g018520 Solanum pennellii HOM05D004137 ORTHO05D004804 8.7e-08 60.8 64 42.2
AL8G32280 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 1.1e-07 60.5 68 39.7
BcaNung02428 Brassica carinata HOM05D004137 ORTHO05D004804 1.5e-07 60.1 68 41.2
Migut.N00553 Erythranthe guttata HOM05D004137 ORTHO05D004804 1.5e-07 60.1 70 38.6
Lsat_1_v5_gn_1_59720 Lactuca sativa HOM05D004137 ORTHO05D004804 1.5e-07 60.1 69 40.6
Aa31LG3G12400 Aethionema arabicum HOM05D004137 ORTHO05D004804 3.3e-07 58.9 68 38.2
Sed0012847 Sechium edule HOM05D004137 ORTHO05D004804 4.3e-07 58.5 66 43.9
BraA01t01711Z Brassica rapa HOM05D004137 ORTHO05D004804 5.6e-07 58.2 103 30.1
BcaC09g50691 Brassica carinata HOM05D004137 ORTHO05D004804 7.3e-07 57.8 68 38.2
Thhalv10015369m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 7.3e-07 57.8 68 36.8
ATR0737G017 Amborella trichopoda HOM05D004137 ORTHO05D004804 9.6e-07 57.4 62 46.8
Lj4g0013694 Lotus japonicus HOM05D004137 ORTHO05D004804 9.6e-07 57.4 68 42.6
A10p13890 Brassica napus HOM05D004137 ORTHO05D004804 1.3e-06 57.0 63 39.7
BraA10t43481Z Brassica rapa HOM05D004137 ORTHO05D004804 1.3e-06 57.0 63 39.7
BolC1t02148H Brassica oleracea HOM05D004137 ORTHO05D004804 1.6e-06 56.6 103 35.0
C01p22180 Brassica napus HOM05D004137 ORTHO05D004804 2.1e-06 56.2 103 35.0
BcaC04g20079 Brassica carinata HOM05D004137 ORTHO05D004804 4.8e-06 55.1 63 38.1
C09p48110 Brassica napus HOM05D004137 ORTHO05D004804 4.8e-06 55.1 63 38.1
BolC9t57661H Brassica oleracea HOM05D004137 ORTHO05D004804 4.8e-06 55.1 63 38.1
CAN.G960.46 Capsicum annuum HOM05D004137 ORTHO05D004804 8.1e-06 54.3 69 40.6


User provided reference genes

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