Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p09540 Brassica napus HOM05D004903 ORTHO05D005849 2.6e-147 525.4 267 100.0
BolC6t36028H Brassica oleracea HOM05D004903 ORTHO05D005849 2.6e-147 525.4 267 100.0
BcaC08g43554 Brassica carinata HOM05D004903 ORTHO05D005849 1.7e-143 512.7 267 97.4
BraA06t23313Z Brassica rapa HOM05D004903 ORTHO05D005849 5.0e-143 511.1 268 97.8
A06p00790 Brassica napus HOM05D004903 ORTHO05D005849 2.5e-142 508.8 268 97.4
BcaB07g33303 Brassica carinata HOM05D004903 ORTHO05D005849 1.5e-139 499.6 269 94.8
A05p17920 Brassica napus HOM05D004903 ORTHO05D005849 5.7e-131 471.1 267 91.4
BraA05t20686Z Brassica rapa HOM05D004903 ORTHO05D005849 1.7e-130 469.5 267 91.0
BcaB02g10893 Brassica carinata HOM05D004903 ORTHO05D005849 5.0e-127 458.0 267 88.4
CARHR044070 Cardamine hirsuta HOM05D004903 ORTHO05D005849 1.9e-126 456.1 279 84.2
BcaC08g44129 Brassica carinata HOM05D004903 ORTHO05D005849 2.5e-126 455.7 268 89.2
C06p15280 Brassica napus HOM05D004903 ORTHO05D005849 2.5e-126 455.7 268 89.2
BolC6t36703H Brassica oleracea HOM05D004903 ORTHO05D005849 1.6e-125 453.0 268 88.4
Thhalv10011709m.g Eutrema salsugineum HOM05D004903 ORTHO05D005849 4.0e-124 448.4 275 85.5
AT1G53760 Arabidopsis thaliana HOM05D004903 ORTHO05D005849 5.2e-124 448.0 273 83.9
Sp1g40280 Schrenkiella parvula HOM05D004903 ORTHO05D005849 2.6e-123 445.7 273 85.3
AL1G62450 Arabidopsis lyrata HOM05D004903 ORTHO05D005849 1.1e-121 440.3 272 83.5
Carub.0001s4303 Capsella rubella HOM05D004903 ORTHO05D005849 4.5e-120 434.9 273 82.1
THA.LOC104810400 Tarenaya hassleriana HOM05D004903 ORTHO05D005849 1.2e-107 393.7 267 76.0
Aa31LG10G1530 Aethionema arabicum HOM05D000070 ORTHO05D003301 5.4e-105 384.8 246 82.5
Duzib160G0805 Durio zibethinus HOM05D004903 ORTHO05D005849 1.1e-92 344.0 276 66.7
Thecc.06G131400 Theobroma cacao HOM05D004903 ORTHO05D005849 1.1e-92 344.0 276 64.1
Gohir.D06G202400 Gossypium hirsutum HOM05D004903 ORTHO05D005849 8.9e-92 340.9 268 66.4
Gorai.010G236300 Gossypium raimondii HOM05D004903 ORTHO05D005849 8.9e-92 340.9 268 66.4
COL.COLO4_30880 Corchorus olitorius HOM05D004903 ORTHO05D005849 4.9e-90 335.1 217 75.6
GSVIVG01016657001 Vitis vinifera HOM05D004903 ORTHO05D005849 4.9e-90 335.1 264 64.0
TAR624G0709 Trochodendron aralioides HOM05D004903 ORTHO05D005849 1.1e-89 334.0 276 62.3
Gohir.A06G142500 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.9e-89 333.2 276 64.9
Gorai.010G172600 Gossypium raimondii HOM05D004903 ORTHO05D005849 1.9e-89 333.2 276 64.5
Atru.chr1.4170 Acer truncatum HOM05D004903 ORTHO05D005849 9.2e-89 330.9 273 63.4
Gohir.A06G194700 Gossypium hirsutum HOM05D004903 ORTHO05D005849 2.1e-88 329.7 268 65.3
ClCG09G001430 Citrullus lanatus HOM05D004903 ORTHO05D005849 2.7e-88 329.3 276 61.6
CiPaw.01G210600 Carya illinoinensis HOM05D004903 ORTHO05D005849 1.0e-87 327.4 276 63.8
MD09G1171800 Malus domestica HOM05D004903 ORTHO05D005849 1.0e-87 327.4 278 62.6
RcHm_v2.0_Chr2g0148141 Rosa chinensis HOM05D004903 ORTHO05D005849 3.9e-87 325.5 282 62.1
EL10Ac7g18248 Beta vulgaris HOM05D004903 ORTHO05D005849 5.1e-87 325.1 267 62.9
Ciclev10026250m.g Citrus clementina HOM05D004903 ORTHO05D005849 5.1e-87 325.1 275 61.5
Prupe.3G030200 Prunus persica HOM05D004903 ORTHO05D005849 1.9e-86 323.2 273 61.2
Manes.11G011500 Manihot esculenta HOM05D004903 ORTHO05D005849 3.3e-86 322.4 276 61.6
PGSC0003DMG400004869 Solanum tuberosum HOM05D004903 ORTHO05D005849 3.3e-86 322.4 275 62.5
CAN.G1633.2 Capsicum annuum HOM05D004903 ORTHO05D005849 4.3e-86 322.0 277 61.4
CsaV3_7G033900 Cucumis sativus L. HOM05D004903 ORTHO05D005849 4.3e-86 322.0 276 59.4
Dinv20374 Davidia involucrata HOM05D004903 ORTHO05D005849 4.3e-86 322.0 277 60.3
FAN14G1686 Fragaria x ananassa HOM05D004903 ORTHO05D005849 4.3e-86 322.0 277 61.7
MD17G1155200 Malus domestica HOM05D004903 ORTHO05D005849 5.6e-86 321.6 279 60.9
FAN09G2808 Fragaria x ananassa HOM05D004903 ORTHO05D005849 7.3e-86 321.2 280 61.4
QL05p000658 Quercus lobata HOM05D004903 ORTHO05D005849 9.6e-86 320.9 276 61.6
QL05p000751 Quercus lobata HOM05D004903 ORTHO05D005849 1.6e-85 320.1 271 62.0
AUR62001391 Chenopodium quinoa HOM05D004903 ORTHO05D005849 2.8e-85 319.3 269 61.3
Hund18627 Selenicereus undatus HOM05D004903 ORTHO05D005849 2.8e-85 319.3 272 59.9
FAN02G0327 Fragaria x ananassa HOM05D004903 ORTHO05D005849 3.6e-85 318.9 273 61.9
CSS0022789 Camellia sinensis var. sinensis HOM05D004903 ORTHO05D005849 4.7e-85 318.5 274 60.6
Lalb_Chr17g0343171 Lupinus albus HOM05D004903 ORTHO05D005849 1.8e-84 316.6 268 59.0
FAN14G0435 Fragaria x ananassa HOM05D004903 ORTHO05D005849 2.4e-84 316.2 273 61.5
Nn8g38503 Nelumbo nucifera HOM05D004903 ORTHO05D005849 2.4e-84 316.2 273 59.7
Solyc06g063130.3 Solanum lycopersicum HOM05D004903 ORTHO05D005849 2.4e-84 316.2 275 61.5
Potri.001G161800 Populus trichocarpa HOM05D004903 ORTHO05D005849 4.0e-84 315.5 276 59.4
Actinidia25997 Actinidia chinensis HOM05D004903 ORTHO05D005849 5.2e-84 315.1 275 59.6
FvH4_6g36070 Fragaria vesca HOM05D004903 ORTHO05D005849 5.2e-84 315.1 279 59.9
Lj3g0025901 Lotus japonicus HOM05D004903 ORTHO05D005849 8.9e-84 314.3 273 59.7
TWI59G0350 Tripterygium wilfordii HOM05D004903 ORTHO05D005849 8.9e-84 314.3 283 58.3
Sopen06g022580 Solanum pennellii HOM05D004903 ORTHO05D005849 1.5e-83 313.5 275 61.1
CANSAT56G0172 Cannabis sativa HOM05D004903 ORTHO05D005849 2.0e-83 313.2 271 59.4
Nitab4.5_0006190g0020 Nicotiana tabacum HOM05D004903 ORTHO05D005849 2.0e-83 313.2 273 60.4
HanXRQChr12g0360041 Helianthus annuus HOM05D004903 ORTHO05D005849 2.9e-82 309.3 266 60.5
Peaxi162Scf00207g01534 Petunia axillaris HOM05D004903 ORTHO05D005849 2.9e-82 309.3 273 59.7
Glyma.16G015600 Glycine max HOM05D004903 ORTHO05D005849 8.4e-82 307.8 271 57.9
Glyma.07G046600 Glycine max HOM05D004903 ORTHO05D005849 1.9e-81 306.6 273 56.0
Sed0027894 Sechium edule HOM05D004903 ORTHO05D005849 5.4e-81 305.1 278 57.6
arahy.Tifrunner.gnm1.ann1.97GHXX Arachis hypogaea HOM05D004903 ORTHO05D005849 7.1e-81 304.7 272 57.7
PSO135G0609 Papaver somniferum HOM05D004903 ORTHO05D005849 2.1e-80 303.1 266 57.9
Eucgr.J02586 Eucalyptus grandis HOM05D004903 ORTHO05D005849 2.7e-80 302.8 274 60.9
PSO724G0850 Papaver somniferum HOM05D004903 ORTHO05D005849 4.6e-80 302.0 266 57.9
Cpa.g.sc25.203 Carica papaya HOM05D004903 ORTHO05D005849 6.0e-80 301.6 185 79.5
DCAR_022636 Daucus carota HOM05D004903 ORTHO05D005849 6.0e-80 301.6 276 58.0
Aqoxy7G00919 Aquilegia oxysepala HOM05D004903 ORTHO05D005849 3.9e-79 298.9 285 54.7
Actinidia24416 Actinidia chinensis HOM05D004903 ORTHO05D005849 6.6e-79 298.1 287 55.7
Psat4g164720 Pisum sativum HOM05D004903 ORTHO05D005849 8.7e-79 297.7 272 54.4
Sc12g0011010 Simmondsia chinensis HOM05D004903 ORTHO05D005849 5.6e-78 295.0 202 71.3
Lsat_1_v5_gn_5_137641 Lactuca sativa HOM05D004903 ORTHO05D005849 9.6e-78 294.3 259 58.3
arahy.Tifrunner.gnm1.ann1.HDKQ14 Arachis hypogaea HOM05D004903 ORTHO05D005849 1.3e-77 293.9 292 55.5
Migut.I01143 Erythranthe guttata HOM05D004903 ORTHO05D005849 1.3e-77 293.9 273 56.8
Rhsim08G0245600 Rhododendron simsii HOM05D004903 ORTHO05D005849 1.3e-77 293.9 238 64.7
Phvul.010G122300 Phaseolus vulgaris HOM05D004903 ORTHO05D005849 2.1e-77 293.1 275 54.2
arahy.Tifrunner.gnm1.ann1.3XU7EE Arachis hypogaea HOM05D004903 ORTHO05D005849 5.3e-76 288.5 271 56.5
Lj5A28T47 Lonicera japonica HOM05D004903 ORTHO05D005849 9.0e-76 287.7 330 50.9
Nitab4.5_0010570g0050 Nicotiana tabacum HOM05D004903 ORTHO05D005849 1.2e-75 287.3 266 58.3
Medtr8g023500 Medicago truncatula HOM05D004903 ORTHO05D005849 1.5e-75 287.0 279 53.8
Gorai.011G054300 Gossypium raimondii HOM05D004903 ORTHO05D005849 2.0e-75 286.6 220 65.0
arahy.Tifrunner.gnm1.ann1.M9BVNS Arachis hypogaea HOM05D004903 ORTHO05D005849 3.4e-75 285.8 272 55.5
arahy.Tifrunner.gnm1.ann1.AA2XIP Arachis hypogaea HOM05D004903 ORTHO05D005849 5.8e-75 285.0 275 55.3
SalBow6G3230 Salvia bowleyana HOM05D004903 ORTHO05D005849 9.9e-75 284.3 271 55.0
arahy.Tifrunner.gnm1.ann1.ZQ2A8X Arachis hypogaea HOM05D004903 ORTHO05D005849 2.9e-74 282.7 292 52.7
vmacro18714 Vaccinium macrocarpon HOM05D004903 ORTHO05D005849 2.9e-74 282.7 275 56.4
HPP92_000828 Vanilla planifolia HOM05D004903 ORTHO05D005849 3.2e-73 279.3 263 54.4
MSTRG.10905 Avicennia marina HOM05D004903 ORTHO05D005849 1.2e-72 277.3 284 52.5
Zm00001eb207930 Zea mays HOM05D004903 ORTHO05D005849 1.2e-72 277.3 272 53.7
arahy.Tifrunner.gnm1.ann1.5Z4EMJ Arachis hypogaea HOM05D004903 ORTHO05D005849 4.6e-72 275.4 266 54.5
Cc04_g00600 Coffea canephora HOM05D004903 ORTHO05D005849 6.0e-72 275.0 279 53.4
SGA_v2.0_scaffold71G23946 Striga asiatica HOM05D004903 ORTHO05D005849 1.7e-71 273.5 281 55.2
Ca_23466_v3 Cicer arietinum L. HOM05D004903 ORTHO05D005849 6.6e-71 271.6 224 59.8
MELO3C024303.2 Cucumis melo HOM05D004903 ORTHO05D005849 8.7e-71 271.2 193 67.9
Sabra03G0044200 Salix brachista HOM05D004903 ORTHO05D005849 1.9e-70 270.0 303 50.8
ATR0006G080 Amborella trichopoda HOM05D004903 ORTHO05D005849 4.3e-70 268.9 263 51.3
Hma1.2p1_1999F.1_g310500 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 2.1e-69 266.5 184 69.6
MBI17_g12875_MAGBIO Magnolia biondii HOM05D004903 ORTHO05D005849 2.1e-69 266.5 267 50.6
TPR.G15248 Trifolium pratense HOM05D004903 ORTHO05D005849 2.8e-69 266.2 222 59.9
Os02g0152600 Oryza sativa ssp. japonica HOM05D004903 ORTHO05D005849 4.8e-69 265.4 281 50.9
VMungo0331G0875 Vigna mungo HOM05D004903 ORTHO05D005849 8.1e-69 264.6 218 60.1
AUR62025608 Chenopodium quinoa HOM05D004903 ORTHO05D005849 1.4e-68 263.8 254 57.1
Sabra01G0130700 Salix brachista HOM05D004903 ORTHO05D005849 9.9e-67 257.7 294 51.0
unitig_32.g11002 Utricularia gibba HOM05D004903 ORTHO05D005849 3.8e-66 255.8 278 48.9
Gohir.A10G050050 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.1e-65 254.2 255 56.1
ECA234G0009 Erigeron canadensis HOM05D004903 ORTHO05D005849 2.1e-64 250.0 215 58.6
Oeu053414.1 Olea europaea HOM05D004903 ORTHO05D005849 3.5e-64 249.2 233 54.9
Cfa003452 Carpinus fangiana HOM05D004903 ORTHO05D005849 1.0e-63 247.7 206 64.6
Dinv37814 Davidia involucrata HOM05D004903 ORTHO05D005849 1.1e-60 237.7 208 59.1
Oeu019513.1 Olea europaea HOM05D004903 ORTHO05D005849 5.3e-60 235.3 190 61.6
Sed0021101 Sechium edule HOM05D004903 ORTHO05D005849 1.1e-57 227.6 203 57.6
CDE06G0378 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 3.2e-57 226.1 194 55.2
CDE04G1042 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 1.2e-56 224.2 194 56.2
Gohir.D10G050650 Gossypium hirsutum HOM05D004903 ORTHO05D005849 3.5e-56 222.6 161 67.1
BcaB02g07096 Brassica carinata HOM05D000219 ORTHO05D000226 1.9e-54 216.9 112 96.4
BcaB07g32153 Brassica carinata HOM05D004903 ORTHO05D005849 2.8e-53 213.0 116 92.2
Hma1.2p1_0090F.1_g045680 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 3.1e-52 209.5 215 53.0
Actinidia31143 Actinidia chinensis HOM05D004903 ORTHO05D005849 9.0e-52 208.0 212 55.2
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 4.2e-49 199.1 232 53.9
Mapoly0021s0048 Marchantia polymorpha HOM05D004903 ORTHO05D005849 4.8e-45 185.7 280 38.6
AagrBONN_evm.TU.Sc2ySwM_228.2429 Anthoceros agrestis HOM05D004903 ORTHO05D005849 5.9e-43 178.7 215 42.3
Gohir.D06G148232 Gossypium hirsutum HOM05D004903 ORTHO05D005849 4.2e-41 172.6 112 75.0
CBR_g34164 Chara braunii HOM05D004903 ORTHO05D005849 3.4e-35 152.9 204 38.7
Haze_16148 Corylus avellana HOM05D003205 ORTHO05D003746 4.7e-32 142.5 192 48.4
Haze_16144 Corylus avellana HOM05D003205 ORTHO05D003746 3.9e-31 139.4 191 47.1
Pp3c13_9790 Physcomitrium patens HOM05D004903 ORTHO05D005849 1.1e-30 137.9 267 31.8
arahy.Tifrunner.gnm1.ann1.AT31DH Arachis hypogaea HOM05D004903 ORTHO05D005849 1.7e-29 134.0 96 67.7
arahy.Tifrunner.gnm1.ann1.RS9BE1 Arachis hypogaea HOM05D004903 ORTHO05D005849 2.8e-29 133.3 96 67.7
Gohir.D02G109866 Gossypium hirsutum HOM05D004903 ORTHO05D005849 5.5e-25 119.0 84 66.7
SEGI_28585 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 1.4e-20 104.4 122 44.3
SEGI_38260 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 1.4e-20 104.4 131 42.7
CDE06G0441 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 1.2e-19 101.3 91 52.7
Hma1.2p1_0090F.1_g045690 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 2.3e-15 87.0 69 60.9
Cre08.g358557 Chlamydomonas reinhardtii HOM05D004903 ORTHO05D005849 3.0e-15 86.7 211 26.1
TPR.G26438 Trifolium pratense HOM05D004903 ORTHO05D005849 3.1e-12 76.6 71 47.9
PRCOL_00005128 Prasinoderma coloniale HOM05D004903 ORTHO05D005849 4.1e-12 76.3 272 27.9
Cpa.g.sc25.204 Carica papaya HOM05D004903 ORTHO05D005849 1.7e-10 70.9 106 44.3
Duzib192G1079 Durio zibethinus HOM05D004903 ORTHO05D005849 2.9e-10 70.1 205 31.2
Glyma.16G014900 Glycine max HOM05D004903 ORTHO05D005849 1.2e-08 64.7 92 41.3
arahy.Tifrunner.gnm1.ann1.1E2DFU Arachis hypogaea HOM05D001485 ORTHO05D005849 1.6e-08 64.3 48 70.8
Actinidia21845 Actinidia chinensis HOM05D004903 ORTHO05D005849 6.1e-08 62.4 44 65.9
MBI17_g12881_MAGBIO Magnolia biondii HOM05D007686 ORTHO05D009709 1.8e-07 60.8 56 53.6
MCO07G235 Micromonas commoda HOM05D004903 ORTHO05D005849 3.0e-07 60.1 189 24.9
arahy.Tifrunner.gnm1.ann1.ZRCJ38 Arachis hypogaea HOM05D004903 ORTHO05D005849 9.8e-06 55.1 64 53.1


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