Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p08880 Brassica napus HOM05D000042 ORTHO05D020036 9.0e-54 213.4 112 100.0
C06p08840 Brassica napus HOM05D000042 ORTHO05D020036 5.3e-38 161.0 119 79.0
BolC6t35967H Brassica oleracea HOM05D000042 ORTHO05D020036 1.5e-37 159.5 132 71.2
BraA06t23345Z Brassica rapa HOM05D000042 ORTHO05D020036 1.3e-31 139.8 135 62.2
BcaC08g43503 Brassica carinata HOM05D000042 ORTHO05D020036 9.1e-30 133.7 86 82.6
BolC6t35962H Brassica oleracea HOM05D000042 ORTHO05D020036 2.5e-27 125.6 85 82.4
A06p01180 Brassica napus HOM05D000042 ORTHO05D020036 9.7e-24 113.6 123 57.7
C08p32790 Brassica napus HOM05D000042 ORTHO05D000028 1.2e-18 96.7 182 44.0
BolC8t50890H Brassica oleracea HOM05D000042 ORTHO05D000028 1.2e-18 96.7 182 44.0
A09p50280 Brassica napus HOM05D000042 ORTHO05D000028 3.0e-17 92.0 181 43.6
BraA09t40479Z Brassica rapa HOM05D000042 ORTHO05D000028 3.0e-17 92.0 181 43.6
BcaB02g07609 Brassica carinata HOM05D000042 ORTHO05D000028 1.8e-14 82.8 185 42.2
BraA04t16037Z Brassica rapa HOM05D000042 ORTHO05D000028 5.3e-14 81.3 185 40.5
Sp5g05210 Schrenkiella parvula HOM05D000042 ORTHO05D000028 7.0e-14 80.9 182 41.8
BcaC02g09933 Brassica carinata HOM05D000042 ORTHO05D000028 5.9e-13 77.8 185 40.5
C04p35030 Brassica napus HOM05D000042 ORTHO05D000028 5.9e-13 77.8 185 40.5
BolC4t25060H Brassica oleracea HOM05D000042 ORTHO05D000028 5.9e-13 77.8 185 40.5
A07p23370 Brassica napus HOM05D000042 ORTHO05D000028 7.7e-13 77.4 169 41.4
BraA07t30002Z Brassica rapa HOM05D000042 ORTHO05D000028 7.7e-13 77.4 169 41.4
AT3G57390 Arabidopsis thaliana HOM05D000042 ORTHO05D000028 1.1e-11 73.6 183 39.3
AL5G38920 Arabidopsis lyrata HOM05D000042 ORTHO05D000028 1.5e-11 73.2 181 38.1
C06p24440 Brassica napus HOM05D000042 ORTHO05D000028 1.5e-11 73.2 169 40.2
BolC6t37591H Brassica oleracea HOM05D000042 ORTHO05D000028 1.5e-11 73.2 169 40.2
Thhalv10006251m.g Eutrema salsugineum HOM05D000042 ORTHO05D000028 1.9e-11 72.8 135 43.7
BcaB02g08318 Brassica carinata HOM05D000042 ORTHO05D000028 9.4e-11 70.5 184 38.6
BcaC08g44836 Brassica carinata HOM05D000042 ORTHO05D000028 1.6e-10 69.7 169 39.6
Carub.0005s2423 Capsella rubella HOM05D000042 ORTHO05D000028 3.6e-10 68.6 167 40.1
A04p03160 Brassica napus HOM05D000042 ORTHO05D000028 3.0e-09 65.5 94 53.2
THA.LOC104824433 Tarenaya hassleriana HOM05D000042 ORTHO05D000028 9.8e-08 60.5 182 31.3
Aa31LG10G12220 Aethionema arabicum HOM05D000042 ORTHO05D000028 1.3e-07 60.1 77 53.2


User provided reference genes

Program Settings