Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 7.3e-268 926.8 512 100.0
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 1.3e-264 916.0 512 99.0
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 1.2e-246 856.3 512 94.7
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 4.8e-219 764.6 550 77.8
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 1.0e-216 756.9 550 77.5
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 2.6e-71 273.9 316 67.1
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 3.4e-63 246.9 330 54.5
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 4.4e-63 246.5 290 57.9
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 1.6e-60 238.0 296 56.4
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 1.6e-60 238.0 296 56.4
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 1.8e-56 224.6 263 55.1
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 1.5e-55 221.5 287 55.7
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 2.7e-52 210.7 151 74.2
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 2.5e-50 204.1 264 58.7
BcaB03g13247 Brassica carinata HOM05D007694 ORTHO05D007622 7.8e-44 182.6 299 52.5
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 1.1e-42 178.7 133 72.2
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 2.8e-41 174.1 387 42.1
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 8.1e-41 172.6 387 41.9
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 8.1e-41 172.6 387 41.9
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 6.8e-40 169.5 387 41.6
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 3.5e-36 157.1 434 33.9
BcaC05g29803 Brassica carinata HOM05D007694 ORTHO05D019969 4.6e-36 156.8 466 35.8
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 6.0e-36 156.4 153 59.5
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 5.1e-35 153.3 150 56.7
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 5.1e-35 153.3 153 58.8
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 6.6e-35 152.9 151 58.9
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 6.6e-35 152.9 151 58.9
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 6.6e-35 152.9 151 58.9
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 1.1e-34 152.1 142 61.3
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 1.5e-34 151.8 150 56.0
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 1.5e-34 151.8 150 56.0
C07p27460 Brassica napus HOM05D007694 ORTHO05D019969 3.3e-34 150.6 100 76.0
C03p14610 Brassica napus HOM05D007694 ORTHO05D019969 1.6e-33 148.3 434 32.9
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 2.1e-33 147.9 151 58.3
BolC7t43276H Brassica oleracea HOM05D007694 ORTHO05D019969 2.8e-33 147.5 100 75.0
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 4.7e-33 146.7 150 55.3
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 6.2e-33 146.4 150 54.7
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 4.0e-32 143.7 153 54.2
C03p13860 Brassica napus HOM05D007694 ORTHO05D019969 8.9e-32 142.5 100 73.0
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 1.5e-31 141.7 118 66.9
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 4.4e-31 140.2 153 52.9
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 7.6e-31 139.4 140 57.9
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 9.9e-31 139.0 142 57.0
BraA09t39372Z Brassica rapa HOM05D007694 ORTHO05D018628 4.1e-29 133.7 130 57.7
A01p18710 Brassica napus HOM05D007694 ORTHO05D018628 9.2e-29 132.5 135 59.3
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 1.2e-28 132.1 148 52.0
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 1.2e-28 132.1 148 52.0
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 9.6e-26 122.5 148 52.7
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 9.6e-26 122.5 148 52.7
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 1.2e-23 115.5 150 47.3
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 2.9e-22 110.9 464 30.0
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 2.5e-18 97.8 195 48.2
BcaC02g10860 Brassica carinata HOM05D009681 ORTHO05D013235 3.6e-17 94.0 150 42.7
BcaC01g04122 Brassica carinata HOM05D009681 ORTHO05D013235 1.4e-16 92.0 148 43.2
C01p52730 Brassica napus HOM05D009681 ORTHO05D013235 1.8e-16 91.7 157 40.8
BcaC01g03734 Brassica carinata HOM05D009681 ORTHO05D013235 5.3e-16 90.1 152 41.4
BcaB01g05936 Brassica carinata HOM05D009681 ORTHO05D013235 6.9e-16 89.7 147 42.2
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 2.0e-15 88.2 58 74.1
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 2.0e-15 88.2 58 74.1
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 9.9e-15 85.9 354 38.1
A02p13980 Brassica napus HOM05D007694 ORTHO05D098099 9.9e-15 85.9 54 79.6
BcaB03g15520 Brassica carinata HOM05D009681 ORTHO05D013235 3.8e-14 84.0 150 42.7
C03p14360 Brassica napus HOM05D009681 ORTHO05D013235 8.4e-14 82.8 148 39.9
BcaC04g22727 Brassica carinata HOM05D009681 ORTHO05D013235 4.2e-13 80.5 160 38.1
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 1.6e-12 78.6 55 76.4
BcaB06g29478 Brassica carinata HOM05D008960 ORTHO05D021621 1.0e-11 75.9 220 36.8
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 3.9e-11 73.9 178 48.9
C04p72940 Brassica napus HOM05D007694 ORTHO05D040685 3.9e-11 73.9 52 71.2
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 5.1e-11 73.6 134 44.8
BolC7t41525H Brassica oleracea HOM05D006896 ORTHO05D007622 8.7e-11 72.8 150 39.3
BolC4t28328H Brassica oleracea HOM05D007694 ORTHO05D040685 1.1e-10 72.4 52 71.2
A09p45490 Brassica napus HOM05D009681 ORTHO05D013235 3.3e-10 70.9 137 40.1
BcaC04g22211 Brassica carinata HOM05D040530 ORTHO05D032573 4.3e-10 70.5 54 66.7
C03p44900 Brassica napus HOM05D009681 ORTHO05D013235 4.3e-10 70.5 124 39.5
BraA07t28487Z Brassica rapa HOM05D006896 ORTHO05D007622 4.3e-10 70.5 71 60.6
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 9.6e-10 69.3 152 40.1
BraA09t40010Z Brassica rapa HOM05D009681 ORTHO05D013235 9.6e-10 69.3 137 39.4
BcaC05g27972 Brassica carinata HOM05D007694 ORTHO05D039545 2.8e-09 67.8 70 57.1
A06p00150 Brassica napus HOM05D008960 ORTHO05D021621 3.7e-09 67.4 112 43.8
BcaB03g13690 Brassica carinata HOM05D007694 ORTHO05D094466 4.8e-09 67.0 76 56.6
BcaB05g23971 Brassica carinata HOM05D007694 ORTHO05D092126 4.0e-08 63.9 55 63.6
C09p46020 Brassica napus HOM05D007694 ORTHO05D099111 4.0e-08 63.9 49 67.3
BcaC03g13094 Brassica carinata HOM05D012955 ORTHO05D013233 5.3e-08 63.5 94 42.6
BcaC03g18085 Brassica carinata HOM05D008960 ORTHO05D021621 5.3e-08 63.5 108 43.5
BolC2t12209H Brassica oleracea HOM05D008960 ORTHO05D021621 5.3e-08 63.5 108 43.5
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 5.3e-08 63.5 129 41.1
BcaNung03237 Brassica carinata HOM05D007694 ORTHO05D092031 9.0e-08 62.8 136 37.5
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 1.2e-07 62.4 123 41.5
BraA01t00165Z Brassica rapa HOM05D009832 ORTHO05D012823 1.2e-07 62.4 42 73.8
C06p25450 Brassica napus HOM05D009661 ORTHO05D020160 2.0e-07 61.6 210 34.8
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 2.6e-07 61.2 123 40.7
C05p39740 Brassica napus HOM05D007694 ORTHO05D039545 2.6e-07 61.2 78 50.0
BolC6t36831H Brassica oleracea HOM05D009832 ORTHO05D106286 2.6e-07 61.2 55 58.2
BcaC06g31833 Brassica carinata HOM05D007694 ORTHO05D012823 4.5e-07 60.5 54 59.3
C07p10600 Brassica napus HOM05D006896 ORTHO05D007622 4.5e-07 60.5 150 34.0
BolC7t45494H Brassica oleracea HOM05D009832 ORTHO05D012823 5.8e-07 60.1 49 65.3
A09p41260 Brassica napus HOM05D016611 ORTHO05D099774 7.6e-07 59.7 53 64.2
C01p13390 Brassica napus HOM05D009832 ORTHO05D012823 7.6e-07 59.7 49 59.2
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 9.9e-07 59.3 252 35.3
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 9.9e-07 59.3 164 35.4
C06p16310 Brassica napus HOM05D009832 ORTHO05D032737 9.9e-07 59.3 55 56.4
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 1.7e-06 58.5 72 48.6
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 2.2e-06 58.2 134 37.3
BcaC06g33706 Brassica carinata HOM05D007694 ORTHO05D019980 2.2e-06 58.2 266 35.3
A10p16920 Brassica napus HOM05D000041 ORTHO05D000061 2.2e-06 58.2 44 72.7
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 2.2e-06 58.2 134 37.3
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 2.9e-06 57.8 264 37.1
A09p60520 Brassica napus HOM05D010036 ORTHO05D102689 2.9e-06 57.8 173 35.3


User provided reference genes

Program Settings