Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p06910 Brassica napus HOM05D005627 ORTHO05D013519 5.3e-59 230.7 108 100.0
A05p27890 Brassica napus HOM05D005627 ORTHO05D028293 4.0e-43 177.9 97 82.5
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 9.0e-43 176.8 97 82.5
BcaB04g18138 Brassica carinata HOM05D005627 ORTHO05D013519 2.6e-42 175.3 97 82.5
C07p12160 Brassica napus HOM05D005627 ORTHO05D013519 7.9e-39 163.7 97 75.3
BcaB02g10993 Brassica carinata HOM05D005627 ORTHO05D013519 3.0e-38 161.8 97 74.2
BolC6t38917H Brassica oleracea HOM05D005627 ORTHO05D013519 2.8e-36 155.2 85 78.8
BolC9t55516H Brassica oleracea HOM05D005627 ORTHO05D013519 4.8e-36 154.5 91 75.8
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 4.1e-35 151.4 97 71.1
BraA01t02229Z Brassica rapa HOM05D005627 ORTHO05D013519 4.1e-35 151.4 97 71.1
BraSC36t46060Z Brassica rapa HOM05D005627 ORTHO05D042212 5.3e-35 151.0 97 67.0
BolC7t41683H Brassica oleracea HOM05D005627 ORTHO05D013519 1.3e-33 146.4 85 75.3
C07p12190 Brassica napus HOM05D005627 ORTHO05D013519 2.9e-33 145.2 85 74.1
BcaB01g01859 Brassica carinata HOM05D005627 ORTHO05D013519 1.1e-32 143.3 97 62.9
BolC7t41687H Brassica oleracea HOM05D005627 ORTHO05D013519 2.5e-32 142.1 85 72.9
C06p20900 Brassica napus HOM05D005627 ORTHO05D013519 2.7e-31 138.7 85 71.8
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 1.9e-24 115.9 70 72.9
BraA09t36746Z Brassica rapa HOM05D005627 ORTHO05D013519 3.0e-22 108.6 70 71.4
C02p24050 Brassica napus HOM05D001038 ORTHO05D000395 2.6e-21 105.5 74 63.5
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 2.6e-21 105.5 95 46.3
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 3.3e-21 105.1 95 45.3
BraA02t07754Z Brassica rapa HOM05D005627 ORTHO05D013519 1.7e-20 102.8 66 71.2
BraA06t25336Z Brassica rapa HOM05D001038 ORTHO05D028293 1.7e-20 102.8 97 54.6
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 2.8e-20 102.1 97 44.3
BraA07t28076Z Brassica rapa HOM05D001038 ORTHO05D028293 4.8e-20 101.3 97 53.6
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 6.3e-20 100.9 91 47.3
C09p30140 Brassica napus HOM05D005627 ORTHO05D042654 1.4e-19 99.8 95 42.1
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 1.8e-19 99.4 89 46.1
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 4.1e-19 98.2 85 50.6
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 4.5e-18 94.7 91 44.0
BraA06t24543Z Brassica rapa HOM05D005627 ORTHO05D027884 1.3e-17 93.2 91 42.9
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 1.7e-17 92.8 91 40.7
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 2.2e-17 92.4 91 44.0
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 2.9e-17 92.0 95 43.2
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 3.8e-17 91.7 91 42.9
BraA06t25653Z Brassica rapa HOM05D005627 ORTHO05D013519 3.8e-17 91.7 48 85.4
A03p31870 Brassica napus HOM05D005627 ORTHO05D027884 5.0e-17 91.3 91 41.8
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 5.0e-17 91.3 91 41.8
A10p07430 Brassica napus HOM05D001038 ORTHO05D042212 6.5e-17 90.9 56 67.9
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 6.5e-17 90.9 85 48.2
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 8.5e-17 90.5 91 39.6
BcaC05g27687 Brassica carinata HOM05D005627 ORTHO05D021837 1.1e-16 90.1 91 42.9
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 1.1e-16 90.1 91 42.9
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 2.5e-16 89.0 89 46.1
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 3.2e-16 88.6 91 41.8
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 1.2e-15 86.7 89 44.9
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 1.6e-15 86.3 89 44.9
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 2.7e-15 85.5 89 44.9
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 4.7e-15 84.7 89 37.1
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 6.1e-15 84.3 96 40.6
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 8.0e-15 84.0 91 39.6
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 1.0e-14 83.6 89 43.8
BcaC04g20562 Brassica carinata HOM05D006289 ORTHO05D016037 1.8e-14 82.8 91 41.8
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 1.8e-14 82.8 89 43.8
BcaC05g24337 Brassica carinata HOM05D009418 ORTHO05D011792 2.3e-14 82.4 96 39.6
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 3.0e-14 82.0 88 40.9
BraA10t42593Z Brassica rapa HOM05D006289 ORTHO05D009842 3.0e-14 82.0 88 42.0
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 3.9e-14 81.6 91 36.3
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 5.2e-14 81.3 88 42.0
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 5.2e-14 81.3 88 42.0
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 1.1e-13 80.1 89 37.1
BraA04t18196Z Brassica rapa HOM05D005627 ORTHO05D027884 1.5e-13 79.7 83 41.0
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 2.0e-13 79.3 89 31.5
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 2.0e-13 79.3 88 40.9
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 2.0e-13 79.3 89 31.5
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 2.0e-13 79.3 89 31.5
BolC7t41649H Brassica oleracea HOM05D005627 ORTHO05D027884 2.6e-13 79.0 80 43.8
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 2.6e-13 79.0 89 38.2
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 3.3e-13 78.6 88 39.8
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 4.4e-13 78.2 88 42.0
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 4.4e-13 78.2 89 42.7
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 5.7e-13 77.8 88 40.9
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 9.7e-13 77.0 89 41.6
BcaC01g03623 Brassica carinata HOM05D009418 ORTHO05D018626 9.7e-13 77.0 96 38.5
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 1.7e-12 76.3 89 31.5
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 1.7e-12 76.3 88 39.8
BolC5t30494H Brassica oleracea HOM05D006289 ORTHO05D009842 1.7e-12 76.3 86 44.2
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 1.7e-12 76.3 86 44.2
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 1.7e-12 76.3 88 39.8
BcaB01g01348 Brassica carinata HOM05D008838 ORTHO05D021876 2.2e-12 75.9 74 41.9
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 2.2e-12 75.9 89 36.0
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 2.2e-12 75.9 89 36.0
BolC5t33636H Brassica oleracea HOM05D008838 ORTHO05D021837 2.2e-12 75.9 75 42.7
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 3.7e-12 75.1 83 42.2
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 3.7e-12 75.1 87 41.4
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 4.8e-12 74.7 77 45.5
BcaC08g46851 Brassica carinata HOM05D009418 ORTHO05D090315 4.8e-12 74.7 96 36.5
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 4.8e-12 74.7 88 37.5
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 6.3e-12 74.3 91 36.3
C04p40320 Brassica napus HOM05D009418 ORTHO05D018626 6.3e-12 74.3 96 37.5
BraA04t18509Z Brassica rapa HOM05D005627 ORTHO05D021837 6.3e-12 74.3 92 34.8
A06p26790 Brassica napus HOM05D005627 ORTHO05D021837 8.2e-12 73.9 79 40.5
A05p23770 Brassica napus HOM05D006289 ORTHO05D042070 1.1e-11 73.6 88 36.4
A09p06670 Brassica napus HOM05D006289 ORTHO05D009842 1.1e-11 73.6 87 37.9
BraA05t21247Z Brassica rapa HOM05D006289 ORTHO05D042070 1.1e-11 73.6 88 36.4
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 1.4e-11 73.2 92 32.6
BcaB04g17340 Brassica carinata HOM05D009418 ORTHO05D009842 1.4e-11 73.2 88 35.2
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 1.4e-11 73.2 88 39.8
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 1.4e-11 73.2 88 39.8
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 1.8e-11 72.8 96 36.5
BolC5t32399H Brassica oleracea HOM05D008838 ORTHO05D021837 1.8e-11 72.8 75 41.3
A02p27270 Brassica napus HOM05D006289 ORTHO05D040814 2.4e-11 72.4 87 37.9
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 2.4e-11 72.4 89 33.7
BraA02t07752Z Brassica rapa HOM05D006289 ORTHO05D040814 2.4e-11 72.4 87 37.9
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 3.1e-11 72.0 91 34.1
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 3.1e-11 72.0 84 32.1
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 3.1e-11 72.0 87 39.1
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 3.1e-11 72.0 89 36.0
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 4.1e-11 71.6 88 38.6
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 5.3e-11 71.2 89 32.6
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 5.3e-11 71.2 89 33.7
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 5.3e-11 71.2 84 31.0
C01p21290 Brassica napus HOM05D006289 ORTHO05D009842 5.3e-11 71.2 87 39.1
BraA01t02617Z Brassica rapa HOM05D005627 ORTHO05D017564 5.3e-11 71.2 88 35.2
C09p37890 Brassica napus HOM05D013280 ORTHO05D011792 7.0e-11 70.9 84 35.7
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 9.1e-11 70.5 91 34.1
A03p68400 Brassica napus HOM05D005627 ORTHO05D017564 9.1e-11 70.5 88 35.2
C01p40360 Brassica napus HOM05D008384 ORTHO05D009842 1.2e-10 70.1 98 34.7
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 1.6e-10 69.7 87 39.1
BraA08t34214Z Brassica rapa HOM05D008838 ORTHO05D021837 2.0e-10 69.3 76 39.5
BcaB07g31665 Brassica carinata HOM05D008384 ORTHO05D009842 3.5e-10 68.6 98 37.8
BcaB03g14887 Brassica carinata HOM05D008384 ORTHO05D009842 4.5e-10 68.2 100 33.0
BraA02t08906Z Brassica rapa HOM05D005627 ORTHO05D019933 4.5e-10 68.2 89 31.5
BcaC08g46979 Brassica carinata HOM05D005627 ORTHO05D019933 1.0e-09 67.0 84 29.8
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 1.3e-09 66.6 89 32.6
BcaC05g27035 Brassica carinata HOM05D006289 ORTHO05D032057 1.3e-09 66.6 91 31.9
C05p28920 Brassica napus HOM05D006289 ORTHO05D032057 1.3e-09 66.6 91 31.9
BolC2t07876H Brassica oleracea HOM05D008384 ORTHO05D009842 1.3e-09 66.6 89 36.0
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 1.3e-09 66.6 91 31.9
A04p11360 Brassica napus HOM05D005627 ORTHO05D019933 2.2e-09 65.9 89 31.5
BraA04t16798Z Brassica rapa HOM05D005627 ORTHO05D019933 2.2e-09 65.9 89 31.5
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 2.9e-09 65.5 56 51.8
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 5.0e-09 64.7 83 36.1
BNapus_Darmor_BZH_scaffold_103p00100 Brassica napus HOM05D005627 ORTHO05D017564 5.0e-09 64.7 88 35.2
BNapus_Darmor_BZH_scaffold_104p00110 Brassica napus HOM05D005627 ORTHO05D017564 5.0e-09 64.7 88 35.2
BraSC36t46108Z Brassica rapa HOM05D005627 ORTHO05D017564 5.0e-09 64.7 88 35.2
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 6.5e-09 64.3 89 34.8
C06p00830 Brassica napus HOM05D008384 ORTHO05D009842 1.9e-08 62.8 91 28.6
BcaC01g03468 Brassica carinata HOM05D008384 ORTHO05D009842 3.2e-08 62.0 91 27.5
C01p10680 Brassica napus HOM05D005627 ORTHO05D011792 4.2e-08 61.6 60 40.0
BcaC08g45148 Brassica carinata HOM05D008384 ORTHO05D009842 7.2e-08 60.8 89 33.7
BraA02t08907Z Brassica rapa HOM05D001038 ORTHO05D000395 7.2e-08 60.8 91 26.4
Sp4g09860 Schrenkiella parvula HOM05D005627 ORTHO05D011792 7.2e-08 60.8 67 37.3
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 9.4e-08 60.5 89 30.3
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 9.4e-08 60.5 89 30.3
BolC8t47414H Brassica oleracea HOM05D005627 ORTHO05D013519 9.4e-08 60.5 34 73.5
BolC8t47418H Brassica oleracea HOM05D005627 ORTHO05D042654 1.2e-07 60.1 95 30.5
BraA06t25319Z Brassica rapa HOM05D005627 ORTHO05D011976 3.6e-07 58.5 95 28.4
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 6.1e-07 57.8 74 33.8
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 6.1e-07 57.8 74 33.8
C02p52100 Brassica napus HOM05D007462 ORTHO05D002086 8.0e-07 57.4 70 34.3
A06p22330 Brassica napus HOM05D005627 ORTHO05D011976 1.0e-06 57.0 95 28.4
BcaB01g01529 Brassica carinata HOM05D008384 ORTHO05D009842 1.4e-06 56.6 74 33.8
BcaB07g32585 Brassica carinata HOM05D009590 ORTHO05D014118 2.3e-06 55.8 98 28.6
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 2.3e-06 55.8 89 32.6
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 2.3e-06 55.8 89 32.6
C06p18890 Brassica napus HOM05D008838 ORTHO05D017578 4.0e-06 55.1 52 46.2


User provided reference genes

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