Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p06420 Brassica napus HOM05D021015 ORTHO05D023955 1.3e-72 276.6 166 100.0
BolC1t03783H Brassica oleracea HOM05D021015 ORTHO05D023955 1.0e-69 266.9 166 95.2
BolC6t35752H Brassica oleracea HOM05D021015 ORTHO05D023955 9.5e-68 260.4 166 95.2
C01p38210 Brassica napus HOM05D021015 ORTHO05D023955 6.8e-66 254.2 166 94.0
BcaC08g43292 Brassica carinata HOM05D021015 ORTHO05D023955 1.7e-24 116.7 85 94.1
BolC9t58533H Brassica oleracea HOM05D001045 ORTHO05D001542 8.7e-21 104.4 98 77.6
Sp6g24890 Schrenkiella parvula HOM05D001045 ORTHO05D001542 4.1e-18 95.5 99 66.7
BcaB01g04858 Brassica carinata HOM05D001045 ORTHO05D001542 5.3e-18 95.1 98 75.5
BraA10t44091Z Brassica rapa HOM05D001045 ORTHO05D001542 6.5e-16 88.2 102 69.6
BcaC03g13681 Brassica carinata HOM05D001045 ORTHO05D001542 1.1e-15 87.4 102 70.6
BNapus_Darmor_BZH_scaffold_38p02360 Brassica napus HOM05D001045 ORTHO05D001542 1.1e-15 87.4 102 70.6
A10p20200 Brassica napus HOM05D001045 ORTHO05D001542 3.2e-15 85.9 102 60.8
Carub.0006s1062 Capsella rubella HOM05D001045 ORTHO05D001542 1.6e-14 83.6 103 52.4
AT5G12110 Arabidopsis thaliana HOM05D001045 ORTHO05D001542 4.6e-14 82.0 163 42.9
BcaB05g23383 Brassica carinata HOM05D001045 ORTHO05D001542 1.8e-13 80.1 104 63.5
C09p64760 Brassica napus HOM05D001045 ORTHO05D001542 1.8e-13 80.1 102 54.9
BcaC04g24212 Brassica carinata HOM05D001045 ORTHO05D001542 2.3e-13 79.7 100 61.0
C09p56790 Brassica napus HOM05D001045 ORTHO05D001542 2.3e-13 79.7 100 61.0
Carub.0006s1786 Capsella rubella HOM05D001045 ORTHO05D001542 5.1e-13 78.6 100 71.0
DCAR_018945 Daucus carota HOM05D001045 ORTHO05D001542 5.1e-13 78.6 161 39.1
Thhalv10014599m.g Eutrema salsugineum HOM05D001045 ORTHO05D001542 5.1e-13 78.6 104 61.5
CARHR193390 Cardamine hirsuta HOM05D001045 ORTHO05D001542 1.5e-12 77.0 102 56.9
BolC2t06959H Brassica oleracea HOM05D001045 ORTHO05D001542 3.3e-12 75.9 164 50.6
BraA03t10268Z Brassica rapa HOM05D001045 ORTHO05D001542 5.7e-12 75.1 108 66.7
BraA10t44634Z Brassica rapa HOM05D001045 ORTHO05D001542 7.4e-12 74.7 116 53.4
THA.LOC104800475 Tarenaya hassleriana HOM05D001045 ORTHO05D001542 7.4e-12 74.7 173 41.0
A10p25690 Brassica napus HOM05D001045 ORTHO05D001542 9.7e-12 74.3 106 54.7
Atru.chr3.2826 Acer truncatum HOM05D001045 ORTHO05D001542 1.7e-11 73.6 157 38.2
A03p09500 Brassica napus HOM05D001045 ORTHO05D001542 1.7e-11 73.6 102 67.6
THA.LOC104816957 Tarenaya hassleriana HOM05D001045 ORTHO05D001542 2.2e-11 73.2 120 43.3
BolC9t59307H Brassica oleracea HOM05D001045 ORTHO05D001542 2.8e-11 72.8 106 55.7
AL6G22890 Arabidopsis lyrata HOM05D001045 ORTHO05D001542 6.3e-11 71.6 110 50.9
A02p05590 Brassica napus HOM05D001045 ORTHO05D001542 8.2e-11 71.2 103 64.1
BraA02t05511Z Brassica rapa HOM05D001045 ORTHO05D001542 8.2e-11 71.2 103 64.1
BcaNung06327 Brassica carinata HOM05D001045 ORTHO05D001542 1.4e-10 70.5 106 51.9
BcaB01g05149 Brassica carinata HOM05D001045 ORTHO05D001542 3.1e-10 69.3 99 66.7
Cpa.g.sc34.208 Carica papaya HOM05D001045 ORTHO05D001542 3.1e-10 69.3 198 33.8
C03p11080 Brassica napus HOM05D001045 ORTHO05D001542 4.1e-10 68.9 158 49.4
BolC3t13578H Brassica oleracea HOM05D001045 ORTHO05D001542 4.1e-10 68.9 158 49.4
Nitab4.5_0002567g0110 Nicotiana tabacum HOM05D001045 ORTHO05D001542 4.1e-10 68.9 121 42.1
AL6G31020 Arabidopsis lyrata HOM05D001045 ORTHO05D001542 5.3e-10 68.6 161 48.4
Thecc.09G256800 Theobroma cacao HOM05D001045 ORTHO05D001542 9.1e-10 67.8 172 40.7
Manes.01G176200 Manihot esculenta HOM05D001045 ORTHO05D001542 2.0e-09 66.6 158 39.9
Dinv35900 Davidia involucrata HOM05D001045 ORTHO05D001542 2.6e-09 66.2 162 34.0
Eucgr.J00657 Eucalyptus grandis HOM05D001045 ORTHO05D001542 2.6e-09 66.2 212 33.5
Rhsim13G0203400 Rhododendron simsii HOM05D001045 ORTHO05D001542 2.6e-09 66.2 194 39.2
GSVIVG01037374001 Vitis vinifera HOM05D001045 ORTHO05D001542 3.4e-09 65.9 177 35.0
HanXRQChr13g0401491 Helianthus annuus HOM05D001045 ORTHO05D001542 4.5e-09 65.5 178 38.2
AT5G19510 Arabidopsis thaliana HOM05D001045 ORTHO05D001542 7.7e-09 64.7 103 62.1
Cfa010155 Carpinus fangiana HOM05D001045 ORTHO05D001542 1.0e-08 64.3 196 38.3
Phvul.006G019800 Phaseolus vulgaris HOM05D001045 ORTHO05D001542 1.0e-08 64.3 177 37.3
Hma1.2p1_1711F.1_g298700 Hydrangea macrophylla HOM05D001045 ORTHO05D001542 1.3e-08 63.9 162 40.7
Lsat_1_v5_gn_6_26180 Lactuca sativa HOM05D001045 ORTHO05D001542 1.3e-08 63.9 152 37.5
Psat0s1231g0040 Pisum sativum HOM05D001045 ORTHO05D001542 1.3e-08 63.9 175 37.1
unitig_22.g6179 Utricularia gibba HOM05D001045 ORTHO05D001542 1.3e-08 63.9 156 41.7
Actinidia22481 Actinidia chinensis HOM05D001045 ORTHO05D001542 1.7e-08 63.5 161 41.0
Lalb_Chr17g0347711 Lupinus albus HOM05D001045 ORTHO05D001542 2.2e-08 63.2 174 35.1
Gohir.A05G071900 Gossypium hirsutum HOM05D001045 ORTHO05D001542 2.9e-08 62.8 192 34.4
PSO384G2374 Papaver somniferum HOM05D001045 ORTHO05D001542 2.9e-08 62.8 175 35.4
CANSAT54G1902 Cannabis sativa HOM05D001045 ORTHO05D001542 3.8e-08 62.4 157 38.2
Glyma.14G039100 Glycine max HOM05D001045 ORTHO05D001542 3.8e-08 62.4 175 40.0
Glyma.02G276600 Glycine max HOM05D001045 ORTHO05D001542 5.0e-08 62.0 175 40.0
TWI75G0894 Tripterygium wilfordii HOM05D001045 ORTHO05D001542 5.0e-08 62.0 159 37.1
Gohir.A13G220400 Gossypium hirsutum HOM05D001045 ORTHO05D001542 6.5e-08 61.6 157 44.6
Nn7g37064 Nelumbo nucifera HOM05D001045 ORTHO05D001542 6.5e-08 61.6 178 38.8
VMungo0647G0939 Vigna mungo HOM05D001045 ORTHO05D001542 6.5e-08 61.6 175 38.9
Phvul.008G204800 Phaseolus vulgaris HOM05D001045 ORTHO05D001542 8.5e-08 61.2 172 39.5
TAR623G1682 Trochodendron aralioides HOM05D001045 ORTHO05D001542 8.5e-08 61.2 178 33.7
Haze_23542 Corylus avellana HOM05D001045 ORTHO05D001542 1.1e-07 60.8 200 32.5
Glyma.13G073200 Glycine max HOM05D001045 ORTHO05D001542 1.1e-07 60.8 197 37.1
Gohir.D13G224400 Gossypium hirsutum HOM05D001045 ORTHO05D001542 1.4e-07 60.5 157 43.3
Gorai.013G255200 Gossypium raimondii HOM05D001045 ORTHO05D001542 1.4e-07 60.5 157 43.3
MSTRG.17647 Avicennia marina HOM05D001045 ORTHO05D001542 2.5e-07 59.7 199 36.2
CiPaw.14G107700 Carya illinoinensis HOM05D001045 ORTHO05D001542 2.5e-07 59.7 176 31.2
Oeu063624.1 Olea europaea HOM05D001045 ORTHO05D001542 2.5e-07 59.7 199 38.2
RcHm_v2.0_Chr4g0419721 Rosa chinensis HOM05D001045 ORTHO05D001542 2.5e-07 59.7 176 40.9
Aa31LG3G15120 Aethionema arabicum HOM05D001045 ORTHO05D001542 3.2e-07 59.3 177 41.8
MD02G1271700 Malus domestica HOM05D001045 ORTHO05D001542 3.2e-07 59.3 207 30.9
TWI79G1542 Tripterygium wilfordii HOM05D001045 ORTHO05D001542 3.2e-07 59.3 160 43.8
PSO339G1070 Papaver somniferum HOM05D001045 ORTHO05D001542 4.2e-07 58.9 175 34.9
Aqoxy7G01944 Aquilegia oxysepala HOM05D001045 ORTHO05D001542 5.5e-07 58.5 181 32.0
arahy.Tifrunner.gnm1.ann1.E3HYWR Arachis hypogaea HOM05D001045 ORTHO05D001542 5.5e-07 58.5 195 37.9
Migut.N02399 Erythranthe guttata HOM05D001045 ORTHO05D001542 5.5e-07 58.5 199 37.2
Lalb_Chr04g0249441 Lupinus albus HOM05D001045 ORTHO05D001542 5.5e-07 58.5 197 35.5
Medtr5g088660 Medicago truncatula HOM05D001045 ORTHO05D001542 5.5e-07 58.5 174 37.4
Gohir.D05G074700 Gossypium hirsutum HOM05D001045 ORTHO05D001542 7.2e-07 58.2 192 35.4
Gorai.009G076000 Gossypium raimondii HOM05D001045 ORTHO05D001542 7.2e-07 58.2 192 35.4
Actinidia12282 Actinidia chinensis HOM05D001045 ORTHO05D001542 9.4e-07 57.8 194 34.0
Solyc11g072190.2 Solanum lycopersicum HOM05D001045 ORTHO05D001542 9.4e-07 57.8 163 38.0
Duzib150G0472 Durio zibethinus HOM05D001045 ORTHO05D001542 1.6e-06 57.0 157 39.5
vmacro04090 Vaccinium macrocarpon HOM05D001045 ORTHO05D001542 1.6e-06 57.0 171 35.1
BcaB05g22597 Brassica carinata HOM05D021015 ORTHO05D094200 2.7e-06 56.2 48 72.9
ECA233G3652 Erigeron canadensis HOM05D001045 ORTHO05D001542 2.7e-06 56.2 198 30.8
Lj2C827G11 Lonicera japonica HOM05D001045 ORTHO05D001542 6.1e-06 55.1 194 35.1
arahy.Tifrunner.gnm1.ann1.SDD8BX Arachis hypogaea HOM05D001045 ORTHO05D001542 7.9e-06 54.7 196 34.2
CAN.G760.9 Capsicum annuum HOM05D001045 ORTHO05D001542 7.9e-06 54.7 99 40.4


User provided reference genes

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