Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p06090 Brassica napus HOM05D010922 ORTHO05D011067 2.0e-84 315.8 178 100.0
BolC6t35722H Brassica oleracea HOM05D010922 ORTHO05D011067 2.0e-84 315.8 178 100.0
BraA06t23488Z Brassica rapa HOM05D010922 ORTHO05D011067 5.2e-80 301.2 178 95.5
A06p02810 Brassica napus HOM05D010922 ORTHO05D011067 7.1e-69 264.2 178 87.1
BcaB07g33533 Brassica carinata HOM05D010922 ORTHO05D011067 2.4e-64 249.2 179 83.8
Sp1g37670 Schrenkiella parvula HOM05D010922 ORTHO05D011067 2.3e-51 206.1 198 70.2
CARHR040970 Cardamine hirsuta HOM05D010922 ORTHO05D011067 2.9e-46 189.1 199 64.8
BcaB02g11196 Brassica carinata HOM05D010922 ORTHO05D011067 1.8e-43 179.9 197 67.5
BcaB02g11197 Brassica carinata HOM05D010922 ORTHO05D011067 1.8e-43 179.9 197 67.5
AL1G58650 Arabidopsis lyrata HOM05D010922 ORTHO05D011067 3.0e-43 179.1 197 64.0
Thhalv10011976m.g Eutrema salsugineum HOM05D010922 ORTHO05D011067 5.1e-43 178.3 194 61.9
AT1G50930 Arabidopsis thaliana HOM05D010922 ORTHO05D011067 6.7e-43 177.9 198 63.6
BcaC05g27377 Brassica carinata HOM05D010922 ORTHO05D011067 6.7e-43 177.9 196 66.8
Carub.0001s3987 Capsella rubella HOM05D010922 ORTHO05D011067 1.4e-40 170.2 198 65.7
A05p19850 Brassica napus HOM05D010922 ORTHO05D011067 4.0e-40 168.7 197 64.0
BraA05t20890Z Brassica rapa HOM05D010922 ORTHO05D011067 4.0e-40 168.7 197 64.0
C05p33110 Brassica napus HOM05D010922 ORTHO05D011067 2.5e-37 159.5 196 62.8
BolC5t32043H Brassica oleracea HOM05D010922 ORTHO05D011067 2.5e-37 159.5 196 62.8
BcaC09g50965 Brassica carinata HOM05D010509 ORTHO05D011067 1.7e-14 83.6 181 37.6
Sp3g18570 Schrenkiella parvula HOM05D010509 ORTHO05D011067 1.1e-13 80.9 182 36.8
C01p18680 Brassica napus HOM05D010509 ORTHO05D011067 7.2e-13 78.2 182 37.4
BolC1t01796H Brassica oleracea HOM05D010509 ORTHO05D011067 7.2e-13 78.2 182 37.4
BcaC05g28316 Brassica carinata HOM05D010509 ORTHO05D011067 1.2e-12 77.4 182 37.4
BcaB04g20646 Brassica carinata HOM05D010509 ORTHO05D011067 1.6e-12 77.0 182 35.7
CARHR096340 Cardamine hirsuta HOM05D010509 ORTHO05D011067 2.1e-12 76.6 182 36.8
C01p43630 Brassica napus HOM05D010509 ORTHO05D011067 2.7e-12 76.3 182 36.8
BolC1t04323H Brassica oleracea HOM05D010509 ORTHO05D011067 2.7e-12 76.3 182 36.8
BcaC09g49001 Brassica carinata HOM05D010509 ORTHO05D011067 3.6e-12 75.9 182 36.8
A01p34240 Brassica napus HOM05D010509 ORTHO05D011067 4.7e-12 75.5 182 36.8
BraA01t03523Z Brassica rapa HOM05D010509 ORTHO05D011067 4.7e-12 75.5 182 36.8
AT3G20557 Arabidopsis thaliana HOM05D010509 ORTHO05D011067 3.9e-11 72.4 182 36.3
Carub.0003s2053 Capsella rubella HOM05D010509 ORTHO05D011067 8.8e-11 71.2 156 36.5
A05p28290 Brassica napus HOM05D010509 ORTHO05D011067 2.0e-10 70.1 182 35.7
BolC5t33093H Brassica oleracea HOM05D010509 ORTHO05D011067 2.0e-10 70.1 182 35.7
BraA05t21711Z Brassica rapa HOM05D010509 ORTHO05D011067 2.0e-10 70.1 182 35.7
Carub.0008s1506 Capsella rubella HOM05D010845 ORTHO05D002692 2.0e-10 70.1 188 34.0
AT5G54790 Arabidopsis thaliana HOM05D010845 ORTHO05D002692 5.7e-10 68.6 182 33.0
BolC2t07773H Brassica oleracea HOM05D010845 ORTHO05D002692 7.4e-10 68.2 183 31.1
C05p43770 Brassica napus HOM05D010509 ORTHO05D011067 1.3e-09 67.4 182 35.2
AL8G30220 Arabidopsis lyrata HOM05D010845 ORTHO05D002692 1.7e-09 67.0 183 31.1
BcaC03g14288 Brassica carinata HOM05D010845 ORTHO05D002692 1.7e-09 67.0 180 31.1
A02p10030 Brassica napus HOM05D010845 ORTHO05D002692 1.7e-09 67.0 181 31.5
BraA02t06071Z Brassica rapa HOM05D010845 ORTHO05D002692 4.8e-09 65.5 181 30.9
Aa31LG8G7360 Aethionema arabicum HOM05D010509 ORTHO05D011067 6.3e-09 65.1 157 34.4
Sp6g16730 Schrenkiella parvula HOM05D010845 ORTHO05D002692 8.2e-09 64.7 181 29.3
BcaB05g22158 Brassica carinata HOM05D010845 ORTHO05D002692 1.1e-08 64.3 183 31.1
Cfa020399 Carpinus fangiana HOM05D002846 ORTHO05D002692 2.4e-08 63.2 189 29.6
AL3G34410 Arabidopsis lyrata HOM05D010509 ORTHO05D011067 4.1e-08 62.4 186 31.2
Haze_09635 Corylus avellana HOM05D002846 ORTHO05D002692 4.1e-08 62.4 192 30.7
THA.LOC104816923 Tarenaya hassleriana HOM05D010922 ORTHO05D011067 5.3e-08 62.0 195 31.8
FAN25G2313 Fragaria x ananassa HOM05D002846 ORTHO05D002692 9.1e-08 61.2 199 28.1
Potri.011G135700 Populus trichocarpa HOM05D002846 ORTHO05D002692 9.1e-08 61.2 186 30.6
TWI38G1873 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 1.2e-07 60.8 197 29.9
Gohir.A12G156600 Gossypium hirsutum HOM05D002846 ORTHO05D002692 1.6e-07 60.5 188 31.4
Thecc.07G046400 Theobroma cacao HOM05D002846 ORTHO05D002692 2.0e-07 60.1 188 29.8
Potri.001G419400 Populus trichocarpa HOM05D002846 ORTHO05D002692 2.6e-07 59.7 180 30.6
TWI38G2122 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 2.6e-07 59.7 200 32.0
CsaV3_3G023230 Cucumis sativus L. HOM05D002846 ORTHO05D002692 7.7e-07 58.2 194 31.4
Lalb_Chr14g0367581 Lupinus albus HOM05D002846 ORTHO05D002692 7.7e-07 58.2 171 34.5
Nn1g07065 Nelumbo nucifera HOM05D002846 ORTHO05D002692 1.7e-06 57.0 168 31.5
A10p12040 Brassica napus HOM05D010845 ORTHO05D002692 2.9e-06 56.2 181 28.7
Peaxi162Scf00407g00210 Petunia axillaris HOM05D002846 ORTHO05D002692 2.9e-06 56.2 167 31.7
FAN21G2316 Fragaria x ananassa HOM05D002846 ORTHO05D002692 3.8e-06 55.8 199 27.6
Hma1.2p1_1344F.1_g277060 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 3.8e-06 55.8 184 29.3
Dinv40727 Davidia involucrata HOM05D002846 ORTHO05D002692 5.0e-06 55.5 185 29.2
Cc05_g13390 Coffea canephora HOM05D002846 ORTHO05D002692 6.5e-06 55.1 196 29.1
Thhalv10015916m.g Eutrema salsugineum HOM05D010845 ORTHO05D002692 6.5e-06 55.1 181 29.3
Hma1.2p1_0948F.1_g240490 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 6.5e-06 55.1 199 29.6
QL08p012603 Quercus lobata HOM05D002846 ORTHO05D002692 6.5e-06 55.1 189 28.6
MD03G1209200 Malus domestica HOM05D002846 ORTHO05D002692 8.5e-06 54.7 185 30.8


User provided reference genes

Program Settings