Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p05820 Brassica napus HOM05D000101 ORTHO05D024137 3.0e-63 245.0 122 100.0
BolC6t35698H Brassica oleracea HOM05D000101 ORTHO05D024137 5.4e-36 154.5 95 86.3
C06p05880 Brassica napus HOM05D000101 ORTHO05D000089 5.8e-30 134.4 99 68.7
BraA06t23542Z Brassica rapa HOM05D000101 ORTHO05D000089 2.2e-29 132.5 99 68.7
BcaC08g43237 Brassica carinata HOM05D000101 ORTHO05D000089 2.9e-29 132.1 99 67.7
BolC6t35700H Brassica oleracea HOM05D000101 ORTHO05D000089 3.8e-29 131.7 99 67.7
BcaC08g43333 Brassica carinata HOM05D000101 ORTHO05D000089 6.4e-29 131.0 99 67.7
BcaC08g43336 Brassica carinata HOM05D000101 ORTHO05D000089 6.4e-29 131.0 99 67.7
BolC6t35701H Brassica oleracea HOM05D000101 ORTHO05D000089 1.2e-27 126.7 110 62.7
A06p02250 Brassica napus HOM05D000101 ORTHO05D000089 1.6e-27 126.3 99 63.6
C06p06940 Brassica napus HOM05D000101 ORTHO05D000089 2.1e-27 125.9 99 66.7
BcaB07g33473 Brassica carinata HOM05D000101 ORTHO05D000089 3.5e-27 125.2 99 66.7
BcaC08g43197 Brassica carinata HOM05D000101 ORTHO05D024137 1.3e-26 123.2 99 65.7
C06p05020 Brassica napus HOM05D000101 ORTHO05D000089 1.3e-26 123.2 99 65.7
C06p05040 Brassica napus HOM05D000101 ORTHO05D024137 1.3e-26 123.2 99 65.7
C06p05110 Brassica napus HOM05D000101 ORTHO05D000089 1.3e-26 123.2 99 65.7
BolC6t35628H Brassica oleracea HOM05D000101 ORTHO05D024137 1.3e-26 123.2 99 65.7
C06p05180 Brassica napus HOM05D000101 ORTHO05D000089 2.3e-26 122.5 112 62.5
C06p05050 Brassica napus HOM05D000101 ORTHO05D000089 6.6e-26 120.9 99 64.6
BraA06t23509Z Brassica rapa HOM05D000101 ORTHO05D000089 1.1e-25 120.2 99 65.7
A06p03330 Brassica napus HOM05D000101 ORTHO05D000089 9.6e-25 117.1 99 64.6
BraA06t23569Z Brassica rapa HOM05D000101 ORTHO05D000089 2.4e-23 112.5 99 61.6
BolC6t35796H Brassica oleracea HOM05D000101 ORTHO05D000089 3.1e-23 112.1 99 61.6
BraA06t23505Z Brassica rapa HOM05D000101 ORTHO05D000089 5.3e-23 111.3 99 62.6
C06p05830 Brassica napus HOM05D000101 ORTHO05D000089 9.0e-23 110.5 98 63.3
BcaB07g33472 Brassica carinata HOM05D000101 ORTHO05D000089 1.2e-22 110.2 91 64.8
C06p05850 Brassica napus HOM05D000101 ORTHO05D000089 8.4e-21 104.0 99 60.6
BraA06t23541Z Brassica rapa HOM05D000101 ORTHO05D000089 1.1e-20 103.6 98 60.2
A06p03310 Brassica napus HOM05D000101 ORTHO05D000089 7.1e-20 100.9 98 58.2
Thhalv10028060m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 2.1e-19 99.4 115 48.7
AT1G15890 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 7.9e-19 97.4 99 52.5
C06p05060 Brassica napus HOM05D000101 ORTHO05D000089 3.0e-18 95.5 99 58.6
Thhalv10028316m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 6.6e-18 94.4 115 46.1
BolC6t35630H Brassica oleracea HOM05D000101 ORTHO05D000089 8.7e-18 94.0 99 57.6
BolC6t35634H Brassica oleracea HOM05D000101 ORTHO05D000089 8.7e-18 94.0 99 57.6
BolC6t35632H Brassica oleracea HOM05D000101 ORTHO05D000089 3.3e-17 92.0 99 54.5
CARHR215210 Cardamine hirsuta HOM05D000101 ORTHO05D000089 3.3e-17 92.0 99 51.5
A06p03340 Brassica napus HOM05D000101 ORTHO05D000089 3.6e-16 88.6 82 62.2
Thhalv10028114m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 3.6e-16 88.6 99 48.5
AL7G46430 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 1.4e-15 86.7 99 48.5
BcaB03g15642 Brassica carinata HOM05D000101 ORTHO05D000089 4.9e-13 78.2 101 43.6
Carub.0001s1569 Capsella rubella HOM05D000101 ORTHO05D000089 8.4e-13 77.4 99 47.5
BcaB07g32923 Brassica carinata HOM05D000101 ORTHO05D000089 1.1e-12 77.0 98 46.9
CARHR179810 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.1e-12 77.0 99 47.5
AL8G16430 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 1.2e-11 73.6 99 43.4
BcaC08g43199 Brassica carinata HOM05D000101 ORTHO05D000089 1.2e-11 73.6 70 58.6
AT1G51480 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 1.6e-11 73.2 99 41.4
CARHR179850 Cardamine hirsuta HOM05D000101 ORTHO05D000089 2.1e-11 72.8 99 43.4
CARHR179750 Cardamine hirsuta HOM05D000101 ORTHO05D000089 2.7e-11 72.4 100 44.0
Thhalv10017979m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 2.7e-11 72.4 107 43.0
Sp1g14190 Schrenkiella parvula HOM05D000101 ORTHO05D000089 2.7e-11 72.4 89 44.9
AL8G16530 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 1.0e-10 70.5 110 40.9
AT5G43730 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 1.0e-10 70.5 99 41.4
AT5G43740 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 1.8e-10 69.7 99 42.4
CARHR179880 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.8e-10 69.7 99 37.4
CARHR179790 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.1e-09 67.0 99 38.4
AL37U10040 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 1.9e-09 66.2 99 42.4
CARHR150940 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.9e-09 66.2 113 38.9
AL8G16550 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 3.3e-09 65.5 77 49.4
C05p14120 Brassica napus HOM05D000537 ORTHO05D000415 3.7e-08 62.0 99 40.4
BolC5t30143H Brassica oleracea HOM05D000537 ORTHO05D000415 3.7e-08 62.0 99 40.4
BraA06t24364Z Brassica rapa HOM05D000537 ORTHO05D000415 2.4e-07 59.3 96 40.6
THA.LOC104813585 Tarenaya hassleriana HOM05D000101 ORTHO05D000089 2.6e-06 55.8 93 39.8
AL7G44810 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 7.6e-06 54.3 96 37.5


User provided reference genes

Program Settings