Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p05800 Brassica napus HOM05D004963 ORTHO05D021908 8.5e-285 983.0 507 100.0
C06p05790 Brassica napus HOM05D004963 ORTHO05D021908 2.0e-153 546.6 340 86.2
BolC6t35697H Brassica oleracea HOM05D004963 ORTHO05D021908 3.1e-53 213.8 126 92.9
BcaC08g43235 Brassica carinata HOM05D004963 ORTHO05D021908 5.5e-50 203.0 338 41.7
AT5G40480 Arabidopsis thaliana HOM05D004963 ORTHO05D006638 1.0e-40 172.2 143 65.0
AL7G49340 Arabidopsis lyrata HOM05D004963 ORTHO05D006638 1.4e-40 171.8 125 71.2
Sp7g01430 Schrenkiella parvula HOM05D004963 ORTHO05D006638 1.4e-40 171.8 145 65.5
A07p20280 Brassica napus HOM05D004963 ORTHO05D006638 3.0e-40 170.6 145 64.1
BraA07t29729Z Brassica rapa HOM05D004963 ORTHO05D006638 3.0e-40 170.6 145 64.1
BcaC08g44458 Brassica carinata HOM05D004963 ORTHO05D006638 8.8e-40 169.1 145 64.1
C06p19070 Brassica napus HOM05D004963 ORTHO05D006638 8.8e-40 169.1 145 64.1
BolC6t37108H Brassica oleracea HOM05D004963 ORTHO05D006638 8.8e-40 169.1 145 64.1
CARHR261510 Cardamine hirsuta HOM05D004963 ORTHO05D006638 8.8e-40 169.1 188 52.1
Carub.0006s0908 Capsella rubella HOM05D004963 ORTHO05D021908 2.0e-39 167.9 162 60.5
Carub.0007s3510 Capsella rubella HOM05D004963 ORTHO05D006638 2.6e-39 167.5 145 63.4
Thhalv10027618m.g Eutrema salsugineum HOM05D004963 ORTHO05D006638 2.2e-38 164.5 145 63.4
BcaB02g07947 Brassica carinata HOM05D004963 ORTHO05D006638 4.8e-38 163.3 145 62.1
Aa31LG9G1130 Aethionema arabicum HOM05D004963 ORTHO05D006638 1.7e-35 154.8 130 62.3
THA.LOC104805370 Tarenaya hassleriana HOM05D004963 ORTHO05D006638 5.2e-32 143.3 155 54.2
Duzib147G0997 Durio zibethinus HOM05D004963 ORTHO05D006638 9.8e-31 139.0 128 53.9
Potri.001G345100 Populus trichocarpa HOM05D004963 ORTHO05D006638 1.7e-30 138.3 130 53.8
Rhsim10G0016800 Rhododendron simsii HOM05D004963 ORTHO05D006638 2.8e-30 137.5 143 49.7
Thecc.04G017500 Theobroma cacao HOM05D004963 ORTHO05D006638 2.8e-30 137.5 127 53.5
Rhsim10G0015700 Rhododendron simsii HOM05D004963 ORTHO05D006638 3.7e-30 137.1 143 49.7
Cfa007367 Carpinus fangiana HOM05D004963 ORTHO05D006638 1.1e-29 135.6 131 52.7
Gohir.A09G029300 Gossypium hirsutum HOM05D004963 ORTHO05D006638 1.1e-29 135.6 131 50.4
MD17G1026700 Malus domestica HOM05D004963 ORTHO05D006638 1.8e-29 134.8 131 53.4
CSS0016229 Camellia sinensis var. sinensis HOM05D004963 ORTHO05D006638 2.4e-29 134.4 125 52.0
Prupe.3G292000 Prunus persica HOM05D004963 ORTHO05D006638 3.1e-29 134.0 128 53.9
GSVIVG01032403001 Vitis vinifera HOM05D004963 ORTHO05D006638 3.1e-29 134.0 128 54.7
Dinv35107 Davidia involucrata HOM05D004963 ORTHO05D006638 7.0e-29 132.9 128 53.1
vmacro05867 Vaccinium macrocarpon HOM05D004963 ORTHO05D006638 1.6e-28 131.7 148 47.3
Atru.chr6.2399 Acer truncatum HOM05D004963 ORTHO05D006638 2.7e-28 131.0 125 51.2
arahy.Tifrunner.gnm1.ann1.8578L4 Arachis hypogaea HOM05D004963 ORTHO05D006638 2.7e-28 131.0 125 53.6
Manes.17G112100 Manihot esculenta HOM05D004963 ORTHO05D006638 2.7e-28 131.0 125 52.0
FvH4_6g51430 Fragaria vesca HOM05D004963 ORTHO05D006638 3.5e-28 130.6 125 54.4
FAN14G4225 Fragaria x ananassa HOM05D004963 ORTHO05D006638 3.5e-28 130.6 125 54.4
CiPaw.03G043900 Carya illinoinensis HOM05D004963 ORTHO05D006638 1.3e-27 128.6 125 52.8
Lj2g0007459 Lotus japonicus HOM05D004963 ORTHO05D006638 1.7e-27 128.3 128 51.6
Glyma.05G003500 Glycine max HOM05D004963 ORTHO05D006638 5.0e-27 126.7 128 50.8
RcHm_v2.0_Chr2g0173101 Rosa chinensis HOM05D004963 ORTHO05D006638 5.0e-27 126.7 147 46.3
BolC6t35689H Brassica oleracea HOM05D004963 ORTHO05D021908 6.6e-27 126.3 117 67.5
Ciclev10018026m.g Citrus clementina HOM05D004963 ORTHO05D006638 6.6e-27 126.3 125 49.6
TPR.G33247 Trifolium pratense HOM05D004963 ORTHO05D006638 1.1e-26 125.6 128 53.9
ClCG10G013880 Citrullus lanatus HOM05D004963 ORTHO05D006638 1.5e-26 125.2 146 44.5
Medtr6g004840 Medicago truncatula HOM05D004963 ORTHO05D006638 1.5e-26 125.2 128 52.3
TWI56G0249 Tripterygium wilfordii HOM05D004963 ORTHO05D006638 1.5e-26 125.2 129 49.6
DCAR_001439 Daucus carota HOM05D004963 ORTHO05D006638 1.9e-26 124.8 128 51.6
Lalb_Chr06g0175731 Lupinus albus HOM05D004963 ORTHO05D006638 2.5e-26 124.4 125 52.8
Nn4g22627 Nelumbo nucifera HOM05D004963 ORTHO05D006638 2.5e-26 124.4 132 50.0
CANSAT64G0570 Cannabis sativa HOM05D004963 ORTHO05D006638 3.3e-26 124.0 128 46.9
Phvul.004G006800 Phaseolus vulgaris HOM05D004963 ORTHO05D006638 3.3e-26 124.0 128 48.4
Cc07_g01650 Coffea canephora HOM05D004963 ORTHO05D006638 5.6e-26 123.2 166 41.6
PGR083G0595 Punica granatum HOM05D004963 ORTHO05D006638 5.6e-26 123.2 132 49.2
Oeu046826.1 Olea europaea HOM05D004963 ORTHO05D006638 7.3e-26 122.9 133 48.1
VMungo0464G1605 Vigna mungo HOM05D004963 ORTHO05D006638 9.5e-26 122.5 125 49.6
MELO3C026582.2 Cucumis melo HOM05D004963 ORTHO05D006638 1.6e-25 121.7 130 48.5
CsaV3_3G042810 Cucumis sativus L. HOM05D004963 ORTHO05D006638 2.1e-25 121.3 124 50.0
Nitab4.5_0001040g0180 Nicotiana tabacum HOM05D004963 ORTHO05D006638 2.8e-25 120.9 127 50.4
Ca_04160_v3 Cicer arietinum L. HOM05D004963 ORTHO05D006638 3.6e-25 120.6 128 52.3
Sed0022939 Sechium edule HOM05D004963 ORTHO05D006638 3.6e-25 120.6 124 49.2
CAN.G257.2 Capsicum annuum HOM05D004963 ORTHO05D006638 4.7e-25 120.2 127 50.4
Nitab4.5_0001655g0190 Nicotiana tabacum HOM05D004963 ORTHO05D006638 6.1e-25 119.8 127 49.6
Solyc02g070810.4 Solanum lycopersicum HOM05D004963 ORTHO05D006638 6.1e-25 119.8 127 50.4
SGA_v2.0_scaffold18G08276 Striga asiatica HOM05D004963 ORTHO05D006638 6.1e-25 119.8 148 43.9
Migut.H00075 Erythranthe guttata HOM05D004963 ORTHO05D006638 8.0e-25 119.4 148 44.6
Peaxi162Scf00796g00213 Petunia axillaris HOM05D004963 ORTHO05D006638 1.0e-24 119.0 190 40.5
Lju41A42T102 Lonicera japonica HOM05D004963 ORTHO05D006638 1.4e-24 118.6 148 46.6
Psat1g054400 Pisum sativum HOM05D004963 ORTHO05D006638 2.3e-24 117.9 125 50.4
PGSC0003DMG400008314 Solanum tuberosum HOM05D004963 ORTHO05D006638 3.0e-24 117.5 172 41.9
MSTRG.3144 Avicennia marina HOM05D004963 ORTHO05D006638 5.2e-24 116.7 148 43.2
Eucgr.J02245 Eucalyptus grandis HOM05D004963 ORTHO05D006638 8.9e-24 115.9 132 44.7
SalBow1G1005 Salvia bowleyana HOM05D004963 ORTHO05D006638 1.2e-23 115.5 128 45.3
Sc03g0007420 Simmondsia chinensis HOM05D004963 ORTHO05D006638 1.2e-23 115.5 132 47.0
PSO067G0032 Papaver somniferum HOM05D004963 ORTHO05D006638 2.6e-23 114.4 139 43.9
Aqoxy5G03770 Aquilegia oxysepala HOM05D004963 ORTHO05D006638 3.4e-23 114.0 132 46.2
CDE07G0232 Ceratophyllum demersum HOM05D004963 ORTHO05D006638 3.4e-23 114.0 142 43.7
TAR629G0020 Trochodendron aralioides HOM05D004963 ORTHO05D006638 3.4e-23 114.0 150 41.3
Ah.03g137060 Amaranthus hybridus HOM05D004963 ORTHO05D006638 4.4e-23 113.6 127 48.8
Sopen02g019920 Solanum pennellii HOM05D004963 ORTHO05D006638 4.4e-23 113.6 127 48.8
AUR62043498 Chenopodium quinoa HOM05D004963 ORTHO05D006638 2.2e-22 111.3 127 47.2
Migut.J01521 Erythranthe guttata HOM05D004963 ORTHO05D006638 4.9e-22 110.2 125 44.8
CARHR149540 Cardamine hirsuta HOM05D004963 ORTHO05D006638 1.1e-21 109.0 85 67.1
PSO063G6295 Papaver somniferum HOM05D004963 ORTHO05D006638 2.4e-21 107.8 128 44.5
Haze_14742 Corylus avellana HOM05D004963 ORTHO05D006638 4.1e-21 107.1 131 45.8
AUR62028465 Chenopodium quinoa HOM05D004963 ORTHO05D006638 2.0e-20 104.8 170 38.8
Sabra16G0224100 Salix brachista HOM05D004963 ORTHO05D006638 2.7e-20 104.4 87 55.2
Gorai.006G033800 Gossypium raimondii HOM05D004963 ORTHO05D006638 7.8e-20 102.8 92 50.0
SEGI_19244 Sequoiadendron giganteum HOM05D004963 ORTHO05D006638 7.8e-20 102.8 134 41.8
ATR0824G203 Amborella trichopoda HOM05D004963 ORTHO05D006638 1.5e-18 98.6 124 40.3
Thhalv10017260m.g Eutrema salsugineum HOM05D015603 ORTHO05D017573 7.3e-18 96.3 90 56.7
Thhalv10017271m.g Eutrema salsugineum HOM05D015603 ORTHO05D017573 7.3e-18 96.3 90 56.7
Carub.0007s0778 Capsella rubella HOM05D004963 ORTHO05D006638 1.2e-17 95.5 240 31.2
Migut.J01523 Erythranthe guttata HOM05D004963 ORTHO05D006638 1.2e-17 95.5 106 44.3
Thhalv10017254m.g Eutrema salsugineum HOM05D015603 ORTHO05D017573 3.6e-17 94.0 116 47.4
A02p14020 Brassica napus HOM05D015603 ORTHO05D017573 6.2e-17 93.2 108 48.1
BraA02t06462Z Brassica rapa HOM05D015603 ORTHO05D017573 1.0e-16 92.4 107 47.7
BolC6t35690H Brassica oleracea HOM05D004963 ORTHO05D039387 8.9e-16 89.4 132 45.5
EL10Ac6g14083 Beta vulgaris HOM05D004963 ORTHO05D006638 3.4e-15 87.4 89 48.3
BcaC08g43232 Brassica carinata HOM05D004963 ORTHO05D039387 4.4e-15 87.0 56 82.1
C02p22570 Brassica napus HOM05D015603 ORTHO05D017573 4.4e-15 87.0 90 56.7
BolC2t08411H Brassica oleracea HOM05D015603 ORTHO05D017573 4.4e-15 87.0 90 56.7
Zm00001eb096130 Zea mays HOM05D004963 ORTHO05D006638 7.5e-15 86.3 124 36.3
COL.COLO4_29124 Corchorus olitorius HOM05D004963 ORTHO05D006638 9.8e-15 85.9 76 56.6
DCAR_003836 Daucus carota HOM05D004963 ORTHO05D006638 3.7e-14 84.0 332 25.3
Gohir.D09G029066 Gossypium hirsutum HOM05D004963 ORTHO05D006638 1.1e-13 82.4 250 28.4
Gorai.006G033900 Gossypium raimondii HOM05D004963 ORTHO05D006638 4.1e-13 80.5 250 28.0
Hma1.2p1_0999F.1_g246170 Hydrangea macrophylla HOM05D004963 ORTHO05D006638 4.1e-13 80.5 226 27.9
FvH4_3g31750 Fragaria vesca HOM05D004963 ORTHO05D006638 2.7e-12 77.8 152 34.2
FvH4_4g00580 Fragaria vesca HOM05D004963 ORTHO05D006638 4.6e-12 77.0 152 34.2
Atru.chr6.2400 Acer truncatum HOM05D004963 ORTHO05D006638 6.0e-12 76.6 216 28.7
Ciclev10014326m.g Citrus clementina HOM05D004963 ORTHO05D006638 3.0e-11 74.3 252 27.4
CBR_g4853 Chara braunii HOM05D004963 ORTHO05D006638 4.7e-09 67.0 133 33.8
SMO145G0002 Selaginella moellendorffii HOM05D004963 ORTHO05D006638 8.1e-09 66.2 109 35.8
FAN11G1562 Fragaria x ananassa HOM05D004963 ORTHO05D006638 3.1e-08 64.3 164 32.3
arahy.Tifrunner.gnm1.ann1.WBLX3G Arachis hypogaea HOM05D004963 ORTHO05D006638 4.0e-08 63.9 238 25.2
Pp3c27_1470 Physcomitrium patens HOM05D004963 ORTHO05D006638 6.8e-08 63.2 126 27.8
ClCG10G013870 Citrullus lanatus HOM05D004963 ORTHO05D006638 5.8e-07 60.1 351 23.9


User provided reference genes

Program Settings