Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p05100 Brassica napus HOM05D004567 ORTHO05D005726 1.7e-128 462.6 227 100.0
BraA06t23566Z Brassica rapa HOM05D004567 ORTHO05D005726 3.8e-91 338.6 196 87.2
C06p05010 Brassica napus HOM05D004567 ORTHO05D005726 1.9e-71 273.1 165 83.0
A06p03590 Brassica napus HOM05D004567 ORTHO05D005726 2.1e-70 269.6 165 82.4
BraA06t23544Z Brassica rapa HOM05D004567 ORTHO05D005726 2.1e-70 269.6 165 82.4
BolC6t35627H Brassica oleracea HOM05D004567 ORTHO05D005726 6.2e-70 268.1 165 81.8
BcaC08g43196 Brassica carinata HOM05D004567 ORTHO05D005726 4.1e-69 265.4 165 81.2
Sp1g37000 Schrenkiella parvula HOM05D004567 ORTHO05D005726 1.0e-67 260.8 165 80.0
A08p03320 Brassica napus HOM05D004567 ORTHO05D005726 6.5e-67 258.1 165 80.0
BolC3t21263H Brassica oleracea HOM05D004567 ORTHO05D005726 6.5e-67 258.1 165 80.0
BraA08t32365Z Brassica rapa HOM05D004567 ORTHO05D005726 6.5e-67 258.1 165 80.0
C03p89490 Brassica napus HOM05D004567 ORTHO05D005726 1.9e-66 256.5 165 79.4
BcaB04g17271 Brassica carinata HOM05D004567 ORTHO05D005726 7.1e-66 254.6 165 78.8
BcaB07g33468 Brassica carinata HOM05D004567 ORTHO05D005726 7.1e-66 254.6 165 78.8
Thhalv10011376m.g Eutrema salsugineum HOM05D004567 ORTHO05D005726 1.6e-65 253.4 165 77.6
A06p03360 Brassica napus HOM05D004567 ORTHO05D005726 1.3e-64 250.4 169 77.5
AL1G57750 Arabidopsis lyrata HOM05D004567 ORTHO05D005726 6.7e-64 248.1 163 77.9
AT1G50120 Arabidopsis thaliana HOM05D004567 ORTHO05D005726 6.7e-64 248.1 163 77.9
Aa31LG10G4020 Aethionema arabicum HOM05D004567 ORTHO05D005726 2.5e-63 246.1 163 77.3
Carub.0001s3927 Capsella rubella HOM05D004567 ORTHO05D005726 4.3e-63 245.4 163 77.3
CARHR040180 Cardamine hirsuta HOM05D004567 ORTHO05D005726 9.7e-63 244.2 163 76.7
THA.LOC104815215 Tarenaya hassleriana HOM05D004567 ORTHO05D005726 1.1e-61 240.7 167 74.3
TWI74G0160 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 2.4e-61 239.6 167 72.5
Ciclev10031151m.g Citrus clementina HOM05D004567 ORTHO05D005726 3.1e-61 239.2 167 72.5
Duzib052G0538 Durio zibethinus HOM05D004567 ORTHO05D005726 9.0e-61 237.7 168 71.4
Cfa022165 Carpinus fangiana HOM05D004567 ORTHO05D005726 1.2e-60 237.3 168 70.2
Gohir.A04G107700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 1.2e-60 237.3 168 70.8
Gorai.012G133500 Gossypium raimondii HOM05D004567 ORTHO05D005726 1.2e-60 237.3 168 70.8
Gohir.D04G147500 Gossypium hirsutum HOM05D004567 ORTHO05D005726 2.6e-60 236.1 168 70.2
arahy.Tifrunner.gnm1.ann1.2EVD6N Arachis hypogaea HOM05D004567 ORTHO05D005726 3.4e-60 235.7 171 68.4
arahy.Tifrunner.gnm1.ann1.JL30IG Arachis hypogaea HOM05D004567 ORTHO05D005726 3.4e-60 235.7 171 68.4
Prupe.2G113700 Prunus persica HOM05D004567 ORTHO05D005726 3.4e-60 235.7 168 69.6
Haze_02919 Corylus avellana HOM05D004567 ORTHO05D005726 4.5e-60 235.3 168 70.2
Lj3g0010315 Lotus japonicus HOM05D004567 ORTHO05D005726 4.5e-60 235.3 168 69.6
Atru.chr10.1157 Acer truncatum HOM05D004567 ORTHO05D005726 7.7e-60 234.6 167 73.1
Duzib132G0874 Durio zibethinus HOM05D004567 ORTHO05D005726 7.7e-60 234.6 168 72.0
GSVIVG01012041001 Vitis vinifera HOM05D004567 ORTHO05D005726 1.0e-59 234.2 167 70.7
Psat4g218760 Pisum sativum HOM05D004567 ORTHO05D005726 1.3e-59 233.8 165 69.7
QL04p025799 Quercus lobata HOM05D004567 ORTHO05D005726 1.3e-59 233.8 168 69.6
Gohir.D12G137700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 2.2e-59 233.0 191 63.9
Gorai.008G149200 Gossypium raimondii HOM05D004567 ORTHO05D005726 2.2e-59 233.0 191 63.9
Thecc.02G160600 Theobroma cacao HOM05D004567 ORTHO05D005726 2.2e-59 233.0 168 72.0
TPR.G17362 Trifolium pratense HOM05D004567 ORTHO05D005726 2.9e-59 232.6 168 68.5
TAR369G0463 Trochodendron aralioides HOM05D004567 ORTHO05D005726 3.8e-59 232.3 168 69.0
CANSAT25G2547 Cannabis sativa HOM05D004567 ORTHO05D005726 6.5e-59 231.5 168 69.0
Medtr8g009530 Medicago truncatula HOM05D004567 ORTHO05D005726 6.5e-59 231.5 168 68.5
Eucgr.J00860 Eucalyptus grandis HOM05D004567 ORTHO05D005726 1.1e-58 230.7 167 70.1
Manes.11G065400 Manihot esculenta HOM05D004567 ORTHO05D005726 1.1e-58 230.7 166 68.1
FvH4_7g08600 Fragaria vesca HOM05D004567 ORTHO05D005726 1.4e-58 230.3 168 67.9
FAN03G0634 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.4e-58 230.3 168 67.9
FAN06G1075 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.4e-58 230.3 168 67.9
Lalb_Chr13g0290871 Lupinus albus HOM05D004567 ORTHO05D005726 1.4e-58 230.3 168 68.5
Nn4g22147 Nelumbo nucifera HOM05D004567 ORTHO05D005726 2.5e-58 229.6 168 68.5
Ca_23147_v3 Cicer arietinum L. HOM05D004567 ORTHO05D005726 4.2e-58 228.8 168 67.9
Hma1.2p1_1513F.1_g288000 Hydrangea macrophylla HOM05D004567 ORTHO05D005726 5.5e-58 228.4 168 68.5
Potri.007G071000 Populus trichocarpa HOM05D004567 ORTHO05D005726 5.5e-58 228.4 171 66.1
Actinidia11176 Actinidia chinensis HOM05D004567 ORTHO05D005726 7.2e-58 228.0 167 68.3
RcHm_v2.0_Chr1g0343571 Rosa chinensis HOM05D004567 ORTHO05D005726 7.2e-58 228.0 168 67.3
VMungo0331G0285 Vigna mungo HOM05D004567 ORTHO05D005726 9.4e-58 227.6 164 69.5
CiPaw.14G015900 Carya illinoinensis HOM05D004567 ORTHO05D005726 1.2e-57 227.3 159 72.3
FAN01G2992 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.2e-57 227.3 168 67.3
FAN10G2749 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.2e-57 227.3 168 67.3
CsaV3_4G009100 Cucumis sativus L. HOM05D004567 ORTHO05D005726 1.6e-57 226.9 168 67.3
Glyma.07G121300 Glycine max HOM05D004567 ORTHO05D005726 2.1e-57 226.5 168 68.5
TWI53G0531 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 3.6e-57 225.7 188 63.3
Rhsim06G0125800 Rhododendron simsii HOM05D004567 ORTHO05D005726 4.6e-57 225.3 182 64.8
Sabra07G0059700 Salix brachista HOM05D004567 ORTHO05D005726 4.6e-57 225.3 180 62.8
Sed0017461 Sechium edule HOM05D004567 ORTHO05D005726 4.6e-57 225.3 168 66.7
PSO339G1936 Papaver somniferum HOM05D004567 ORTHO05D005726 6.1e-57 224.9 168 67.3
PSO063G1783 Papaver somniferum HOM05D004567 ORTHO05D005726 7.9e-57 224.6 167 68.3
Dinv41785 Davidia involucrata HOM05D004567 ORTHO05D005726 1.0e-56 224.2 179 64.8
ATR0605G273 Amborella trichopoda HOM05D004567 ORTHO05D005726 1.4e-56 223.8 165 67.9
Manes.04G103500 Manihot esculenta HOM05D004567 ORTHO05D005726 1.4e-56 223.8 166 68.1
CSS0021756 Camellia sinensis var. sinensis HOM05D004567 ORTHO05D005726 1.8e-56 223.4 167 65.9
Glyma.03G102500 Glycine max HOM05D004567 ORTHO05D005726 1.8e-56 223.4 168 67.9
vmacro12414 Vaccinium macrocarpon HOM05D004567 ORTHO05D005726 2.3e-56 223.0 171 64.9
Cc00_g04630 Coffea canephora HOM05D004567 ORTHO05D005726 3.0e-56 222.6 167 67.7
MD02G1226800 Malus domestica HOM05D004567 ORTHO05D005726 3.0e-56 222.6 168 67.3
MBI01_g01364_MAGBIO Magnolia biondii HOM05D004567 ORTHO05D005726 3.9e-56 222.2 168 67.3
MD07G1086800 Malus domestica HOM05D004567 ORTHO05D005726 3.9e-56 222.2 168 67.9
Phvul.010G040700 Phaseolus vulgaris HOM05D004567 ORTHO05D005726 3.9e-56 222.2 163 68.7
PSO832G3127 Papaver somniferum HOM05D004567 ORTHO05D005726 5.1e-56 221.9 167 67.7
AUR62017692 Chenopodium quinoa HOM05D004567 ORTHO05D005726 1.1e-55 220.7 167 66.5
FAN10G3814 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.1e-55 220.7 168 66.7
Ah.01g012240 Amaranthus hybridus HOM05D004567 ORTHO05D005726 2.5e-55 219.5 168 63.7
Migut.N03351 Erythranthe guttata HOM05D004567 ORTHO05D005726 2.5e-55 219.5 168 65.5
Peaxi162Scf01013g00124 Petunia axillaris HOM05D004567 ORTHO05D005726 2.5e-55 219.5 167 65.9
CAN.G2.11 Capsicum annuum HOM05D004567 ORTHO05D005726 3.3e-55 219.2 169 66.3
Sopen11g010070 Solanum pennellii HOM05D004567 ORTHO05D005726 5.7e-55 218.4 167 65.9
Nitab4.5_0000167g0100 Nicotiana tabacum HOM05D004567 ORTHO05D005726 7.4e-55 218.0 167 65.9
Nitab4.5_0004158g0010 Nicotiana tabacum HOM05D004567 ORTHO05D005726 7.4e-55 218.0 167 65.9
PGSC0003DMG401027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 7.4e-55 218.0 167 65.3
EL10Ac9g22943 Beta vulgaris HOM05D004567 ORTHO05D005726 1.7e-54 216.9 180 62.2
Hund24369 Selenicereus undatus HOM05D004567 ORTHO05D005726 2.8e-54 216.1 168 66.1
Solyc11g019960.2 Solanum lycopersicum HOM05D004567 ORTHO05D005726 2.8e-54 216.1 159 67.9
SGA_v2.0_scaffold24G10556 Striga asiatica HOM05D004567 ORTHO05D005726 4.8e-54 215.3 166 65.1
HanXRQChr12g0379741 Helianthus annuus HOM05D004567 ORTHO05D005726 1.1e-53 214.2 168 63.7
DCAR_011423 Daucus carota HOM05D004567 ORTHO05D005726 1.4e-53 213.8 167 65.3
Lj7A481G48 Lonicera japonica HOM05D004567 ORTHO05D005726 1.8e-53 213.4 168 66.1
SalBow7G4790 Salvia bowleyana HOM05D004567 ORTHO05D005726 2.4e-53 213.0 166 63.3
Cpa.g.sc0.161 Carica papaya HOM05D004567 ORTHO05D005726 3.1e-53 212.6 165 67.3
ECA246G0539 Erigeron canadensis HOM05D004567 ORTHO05D005726 9.1e-53 211.1 194 57.2
CDE02G2175 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 2.0e-52 209.9 169 62.1
Oeu037755.1 Olea europaea HOM05D004567 ORTHO05D005726 3.4e-52 209.1 167 62.9
Sc11g0003400 Simmondsia chinensis HOM05D004567 ORTHO05D005726 5.9e-52 208.4 167 61.7
CDE08G0826 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 1.0e-51 207.6 168 61.9
HPP92_002998 Vanilla planifolia HOM05D004567 ORTHO05D005726 1.3e-51 207.2 165 63.6
Os06g0618600 Oryza sativa ssp. japonica HOM05D004567 ORTHO05D005726 1.7e-51 206.8 163 63.8
Lsat_1_v5_gn_5_37660 Lactuca sativa HOM05D004567 ORTHO05D005726 1.1e-50 204.1 168 61.3
Aqoxy7G00425 Aquilegia oxysepala HOM05D004567 ORTHO05D005726 1.6e-49 200.3 168 61.9
Oeu029993.1 Olea europaea HOM05D004567 ORTHO05D005726 2.1e-49 199.9 159 62.3
SEGI_15833 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 3.6e-49 199.1 162 58.6
Nn3g16289 Nelumbo nucifera HOM05D004567 ORTHO05D005726 7.7e-44 181.4 157 61.1
AagrBONN_evm.TU.Sc2ySwM_228.3324 Anthoceros agrestis HOM05D004567 ORTHO05D005726 1.1e-42 177.6 159 53.5
AUR62015228 Chenopodium quinoa HOM05D004567 ORTHO05D005726 4.7e-41 172.2 167 56.3
Mapoly0026s0045 Marchantia polymorpha HOM05D004567 ORTHO05D005726 1.1e-39 167.5 161 49.1
Gohir.A12G134100 Gossypium hirsutum HOM05D004567 ORTHO05D005726 4.4e-39 165.6 191 48.7
Pp3c23_19720 Physcomitrium patens HOM05D004567 ORTHO05D005726 1.8e-37 160.2 178 47.2
Pp3c20_6950 Physcomitrium patens HOM05D004567 ORTHO05D005726 9.1e-37 157.9 160 50.6
SMO367G1304 Selaginella moellendorffii HOM05D004567 ORTHO05D005726 2.0e-36 156.8 157 48.4
unitig_578.g16282 Utricularia gibba HOM05D004567 ORTHO05D005726 1.7e-35 153.7 187 46.0
Rhsim06G0125500 Rhododendron simsii HOM05D004567 ORTHO05D005726 1.6e-33 147.1 100 73.0
unitig_44.g31559 Utricularia gibba HOM05D004567 ORTHO05D005726 8.0e-33 144.8 153 49.7
Oeu029992.1 Olea europaea HOM05D004567 ORTHO05D005726 1.5e-31 140.6 122 59.0
CBR_g8998 Chara braunii HOM05D004567 ORTHO05D005726 9.1e-29 131.3 142 45.1
Cfa022169 Carpinus fangiana HOM05D004567 ORTHO05D005726 1.3e-27 127.5 112 59.8
Duzib248G1520 Durio zibethinus HOM05D004567 ORTHO05D005726 2.2e-27 126.7 114 59.6
ClCG10G008360 Citrullus lanatus HOM05D004567 ORTHO05D005726 1.4e-21 107.5 87 63.2
ClCG10G008380 Citrullus lanatus HOM05D004567 ORTHO05D005726 6.1e-17 92.0 60 71.7
Rhsim06G0125400 Rhododendron simsii HOM05D004567 ORTHO05D005726 1.5e-15 87.4 52 75.0
Zm00001eb066810 Zea mays HOM05D004567 ORTHO05D005726 6.2e-09 65.5 37 78.4
MELO3C018973.2 Cucumis melo HOM05D004567 ORTHO05D005726 1.8e-08 63.9 37 75.7


User provided reference genes

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