Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p05030 Brassica napus HOM05D000101 ORTHO05D011607 9.8e-121 436.8 220 100.0
C06p05220 Brassica napus HOM05D000101 ORTHO05D000089 9.1e-50 201.1 177 65.0
BolC6t35634H Brassica oleracea HOM05D000101 ORTHO05D000089 9.1e-50 201.1 177 65.0
BcaC08g43199 Brassica carinata HOM05D000101 ORTHO05D000089 3.5e-49 199.1 177 64.4
BolC6t35630H Brassica oleracea HOM05D000101 ORTHO05D000089 3.5e-49 199.1 177 64.4
A06p03310 Brassica napus HOM05D000101 ORTHO05D000089 1.7e-48 196.8 177 63.8
BraA06t23541Z Brassica rapa HOM05D000101 ORTHO05D000089 2.9e-48 196.1 177 63.8
BcaB07g33472 Brassica carinata HOM05D000101 ORTHO05D000089 4.2e-39 165.6 146 60.3
BolC6t35628H Brassica oleracea HOM05D000101 ORTHO05D024137 2.7e-38 162.9 120 74.2
BcaB07g33473 Brassica carinata HOM05D000101 ORTHO05D000089 2.6e-36 156.4 177 51.4
A06p02250 Brassica napus HOM05D000101 ORTHO05D000089 2.2e-35 153.3 177 52.5
BcaC08g43336 Brassica carinata HOM05D000101 ORTHO05D000089 8.5e-32 141.4 177 49.7
C06p06940 Brassica napus HOM05D000101 ORTHO05D000089 8.5e-32 141.4 177 49.7
BcaC08g43333 Brassica carinata HOM05D000101 ORTHO05D000089 2.5e-31 139.8 149 55.7
A06p02990 Brassica napus HOM05D000101 ORTHO05D000089 1.2e-30 137.5 177 48.6
BolC6t35796H Brassica oleracea HOM05D000101 ORTHO05D000089 2.1e-30 136.7 177 46.9
BraA06t24364Z Brassica rapa HOM05D000537 ORTHO05D000415 2.2e-27 126.7 147 51.0
C05p14120 Brassica napus HOM05D000537 ORTHO05D000415 3.7e-27 125.9 147 50.3
AL7G46430 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 2.4e-26 123.2 176 43.8
CARHR215210 Cardamine hirsuta HOM05D000101 ORTHO05D000089 7.0e-26 121.7 143 50.3
BcaB03g15642 Brassica carinata HOM05D000101 ORTHO05D000089 3.5e-25 119.4 177 42.9
BraA06t23505Z Brassica rapa HOM05D000101 ORTHO05D000089 3.5e-25 119.4 177 42.9
A06p03330 Brassica napus HOM05D000101 ORTHO05D000089 1.3e-24 117.5 177 42.9
BraA06t23509Z Brassica rapa HOM05D000101 ORTHO05D000089 1.3e-24 117.5 177 42.9
BolC5t30143H Brassica oleracea HOM05D000537 ORTHO05D000415 5.0e-24 115.5 177 42.4
BcaC08g43237 Brassica carinata HOM05D000101 ORTHO05D000089 2.5e-23 113.2 177 42.4
BolC6t35701H Brassica oleracea HOM05D000101 ORTHO05D000089 2.5e-23 113.2 177 42.4
AT1G15890 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 1.6e-22 110.5 177 40.1
C06p05120 Brassica napus HOM05D000101 ORTHO05D000089 1.6e-22 110.5 178 42.1
CARHR179830 Cardamine hirsuta HOM05D000101 ORTHO05D011607 2.8e-22 109.8 170 39.4
Thhalv10028060m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 2.0e-20 103.6 179 39.1
BraA06t23510Z Brassica rapa HOM05D000101 ORTHO05D000089 3.2e-18 96.3 59 86.4
BcaB07g33471 Brassica carinata HOM05D000101 ORTHO05D011607 5.4e-18 95.5 100 55.0
CARHR179850 Cardamine hirsuta HOM05D000101 ORTHO05D000089 2.7e-17 93.2 171 35.7
C06p05190 Brassica napus HOM05D000101 ORTHO05D000089 4.6e-17 92.4 68 66.2
C06p05870 Brassica napus HOM05D000101 ORTHO05D000089 1.3e-16 90.9 64 70.3
Thhalv10028114m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 8.6e-16 88.2 168 38.1
BolC6t35699H Brassica oleracea HOM05D000101 ORTHO05D011607 2.5e-15 86.7 73 57.5
BcaC08g43236 Brassica carinata HOM05D000101 ORTHO05D011607 5.6e-15 85.5 67 61.2
BraA06t23542Z Brassica rapa HOM05D000101 ORTHO05D000089 1.6e-14 84.0 64 67.2
CARHR179840 Cardamine hirsuta HOM05D000101 ORTHO05D000089 4.7e-14 82.4 133 38.3
BcaC02g11243 Brassica carinata HOM05D000101 ORTHO05D000089 6.2e-14 82.0 156 33.3
Thhalv10017979m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 1.0e-13 81.3 173 32.9
BcaB07g33502 Brassica carinata HOM05D000101 ORTHO05D011607 1.2e-12 77.8 70 55.7
CARHR179790 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.5e-12 77.4 170 33.5
C06p23820 Brassica napus HOM05D000101 ORTHO05D000089 3.4e-12 76.3 127 35.4
C04p18920 Brassica napus HOM05D000101 ORTHO05D000089 5.8e-12 75.5 169 30.2
BolC4t23422H Brassica oleracea HOM05D000101 ORTHO05D000089 5.8e-12 75.5 169 30.2
AT1G51480 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 7.5e-12 75.1 169 33.7
BolC6t37550H Brassica oleracea HOM05D000101 ORTHO05D000089 9.8e-12 74.7 152 31.6
BcaC01g01510 Brassica carinata HOM05D000101 ORTHO05D000089 1.3e-11 74.3 175 30.9
BraA05t20349Z Brassica rapa HOM05D000101 ORTHO05D011607 1.3e-11 74.3 169 29.6
C03p92590 Brassica napus HOM05D000101 ORTHO05D000089 1.7e-11 73.9 175 30.9
Aa31LG1G3710 Aethionema arabicum HOM05D000101 ORTHO05D000089 3.7e-11 72.8 148 31.8
BcaB03g13138 Brassica carinata HOM05D000101 ORTHO05D000089 3.7e-11 72.8 129 35.7
AL8G16430 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 6.4e-11 72.0 169 32.0
C04p28930 Brassica napus HOM05D000101 ORTHO05D000089 6.4e-11 72.0 125 39.2
BolC5t30103H Brassica oleracea HOM05D000101 ORTHO05D000089 8.3e-11 71.6 135 35.6
BolC4t24429H Brassica oleracea HOM05D000101 ORTHO05D000089 1.9e-10 70.5 125 38.4
AT5G43730 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 2.4e-10 70.1 169 32.0
BcaC05g25496 Brassica carinata HOM05D000101 ORTHO05D000089 3.2e-10 69.7 169 27.8
AL7G44810 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 4.1e-10 69.3 141 34.0
CARHR049670 Cardamine hirsuta HOM05D000101 ORTHO05D011607 4.1e-10 69.3 75 52.0
Sp1g14190 Schrenkiella parvula HOM05D000101 ORTHO05D000089 4.1e-10 69.3 64 59.4
CARHR116510 Cardamine hirsuta HOM05D000101 ORTHO05D000089 2.0e-09 67.0 170 32.4
THA.LOC104813383 Tarenaya hassleriana HOM05D000101 ORTHO05D000089 2.7e-09 66.6 170 29.4
CARHR179750 Cardamine hirsuta HOM05D000101 ORTHO05D000089 3.5e-09 66.2 109 42.2
BcaB02g09946 Brassica carinata HOM05D000101 ORTHO05D000089 4.6e-09 65.9 199 27.6
Aa31LG2G12240 Aethionema arabicum HOM05D000101 ORTHO05D000089 1.3e-08 64.3 178 29.2
AT5G43740 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 1.7e-08 63.9 169 31.4
BcaB07g31336 Brassica carinata HOM05D000908 ORTHO05D000089 2.3e-08 63.5 90 40.0
CARHR048950 Cardamine hirsuta HOM05D000101 ORTHO05D000089 2.3e-08 63.5 176 30.1
Thhalv10024140m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 2.3e-08 63.5 199 26.1
AL1G23480 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 3.0e-08 63.2 200 25.5
C09p19380 Brassica napus HOM05D000101 ORTHO05D011607 3.9e-08 62.8 60 48.3
BcaB02g09716 Brassica carinata HOM05D000101 ORTHO05D000089 5.0e-08 62.4 60 43.3
BcaC04g22432 Brassica carinata HOM05D000101 ORTHO05D011607 5.0e-08 62.4 60 48.3
AL1G28050 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 8.6e-08 61.6 135 34.1
AT5G63020 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 8.6e-08 61.6 173 26.0
BraA09t41679Z Brassica rapa HOM05D000101 ORTHO05D000089 8.6e-08 61.6 203 24.1
CARHR179890 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.1e-07 61.2 147 33.3
AL37U10040 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 1.5e-07 60.8 60 58.3
AL8G16550 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 1.5e-07 60.8 60 58.3
BolC9t54853H Brassica oleracea HOM05D000101 ORTHO05D000089 1.5e-07 60.8 65 44.6
AL6G41570 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 1.9e-07 60.5 172 26.7
BolC9t54847H Brassica oleracea HOM05D000101 ORTHO05D011607 1.9e-07 60.5 60 46.7
C08p46760 Brassica napus HOM05D000101 ORTHO05D000089 2.5e-07 60.1 244 23.8
CARHR049180 Cardamine hirsuta HOM05D000101 ORTHO05D000089 2.5e-07 60.1 171 28.1
AT4G10780 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 3.3e-07 59.7 67 44.8
C09p19500 Brassica napus HOM05D000101 ORTHO05D000089 3.3e-07 59.7 65 44.6
BolC8t52214H Brassica oleracea HOM05D000101 ORTHO05D000089 3.3e-07 59.7 199 24.1
CARHR051470 Cardamine hirsuta HOM05D000101 ORTHO05D000089 3.3e-07 59.7 172 27.9
CARHR048990 Cardamine hirsuta HOM05D000101 ORTHO05D011607 5.6e-07 58.9 60 48.3
A09p63950 Brassica napus HOM05D000101 ORTHO05D000089 7.3e-07 58.5 210 27.1
C08p15270 Brassica napus HOM05D000101 ORTHO05D000089 7.3e-07 58.5 124 33.9
BraA09t41741Z Brassica rapa HOM05D000101 ORTHO05D000089 7.3e-07 58.5 210 27.1
CARHR150940 Cardamine hirsuta HOM05D000101 ORTHO05D000089 9.5e-07 58.2 181 28.7
Thhalv10002924m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 9.5e-07 58.2 173 27.7
CARHR052140 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.2e-06 57.8 172 27.9
Thecc.06G023300 Theobroma cacao HOM05D000101 ORTHO05D000089 1.2e-06 57.8 204 24.5
Aa31LG1G3730 Aethionema arabicum HOM05D000101 ORTHO05D000089 1.6e-06 57.4 60 46.7
AT1G12220 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 1.6e-06 57.4 173 27.2
BcaB01g00640 Brassica carinata HOM05D000101 ORTHO05D000089 1.6e-06 57.4 60 40.0
BcaC07g39476 Brassica carinata HOM05D000101 ORTHO05D000089 1.6e-06 57.4 60 43.3
C08p25200 Brassica napus HOM05D000101 ORTHO05D000089 1.6e-06 57.4 60 43.3
BolC8t50140H Brassica oleracea HOM05D000101 ORTHO05D000089 1.6e-06 57.4 60 43.3
CARHR255820 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.6e-06 57.4 171 28.1
Thecc.06G071900 Theobroma cacao HOM05D000101 ORTHO05D000089 1.6e-06 57.4 168 26.8
BcaC07g41710 Brassica carinata HOM05D000101 ORTHO05D000089 2.1e-06 57.0 60 43.3
C09p15570 Brassica napus HOM05D000101 ORTHO05D000089 2.1e-06 57.0 172 26.2
BolC8t52287H Brassica oleracea HOM05D000101 ORTHO05D000089 2.1e-06 57.0 60 43.3
BraA09t39791Z Brassica rapa HOM05D000101 ORTHO05D000089 2.1e-06 57.0 60 43.3
Duzib268G0920 Durio zibethinus HOM05D000101 ORTHO05D000089 2.1e-06 57.0 168 25.0
Aa31LG1G3680 Aethionema arabicum HOM05D000101 ORTHO05D000089 2.8e-06 56.6 60 43.3
BcaB01g00645 Brassica carinata HOM05D000101 ORTHO05D000089 2.8e-06 56.6 60 41.7
BolC9t54462H Brassica oleracea HOM05D000101 ORTHO05D000089 2.8e-06 56.6 167 27.5
CARHR012520 Cardamine hirsuta HOM05D000101 ORTHO05D000089 2.8e-06 56.6 173 27.2
BraA09t41678Z Brassica rapa HOM05D000101 ORTHO05D000089 3.6e-06 56.2 199 23.6
CARHR179880 Cardamine hirsuta HOM05D000101 ORTHO05D000089 3.6e-06 56.2 170 30.0
Thhalv10028316m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 3.6e-06 56.2 47 59.6
BcaC07g41707 Brassica carinata HOM05D000101 ORTHO05D000089 4.7e-06 55.8 60 43.3
C08p47460 Brassica napus HOM05D000101 ORTHO05D000089 4.7e-06 55.8 200 25.0
BolC8t52286H Brassica oleracea HOM05D000101 ORTHO05D000089 4.7e-06 55.8 60 43.3
Aa31LG1G3690 Aethionema arabicum HOM05D000101 ORTHO05D000089 6.2e-06 55.5 60 43.3
BcaC07g41717 Brassica carinata HOM05D000101 ORTHO05D000089 6.2e-06 55.5 124 33.1
A07p23110 Brassica napus HOM05D000101 ORTHO05D000089 6.2e-06 55.5 65 41.5
A09p43210 Brassica napus HOM05D000101 ORTHO05D000089 6.2e-06 55.5 60 41.7
BraA07t29973Z Brassica rapa HOM05D000101 ORTHO05D000089 6.2e-06 55.5 65 41.5
Carub.0001s1569 Capsella rubella HOM05D000101 ORTHO05D000089 6.2e-06 55.5 135 34.8
Duzib268G0022 Durio zibethinus HOM05D000101 ORTHO05D000089 6.2e-06 55.5 168 24.4
Prupe.3G054800 Prunus persica HOM05D000101 ORTHO05D000089 6.2e-06 55.5 203 23.2
TWI18G0762 Tripterygium wilfordii HOM05D000101 ORTHO05D000089 6.2e-06 55.5 173 23.7
BcaC04g22761 Brassica carinata HOM05D000101 ORTHO05D011607 8.1e-06 55.1 167 26.9
Gorai.011G081200 Gossypium raimondii HOM05D000101 ORTHO05D000089 8.1e-06 55.1 155 24.5


User provided reference genes

Program Settings