Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p04780 Brassica napus HOM05D001568 ORTHO05D008804 3.9e-168 594.7 306 100.0
BolC6t35607H Brassica oleracea HOM05D001568 ORTHO05D008804 9.1e-165 583.6 306 98.0
BcaC08g43178 Brassica carinata HOM05D001568 ORTHO05D008804 1.7e-163 579.3 306 97.7
A06p03430 Brassica napus HOM05D001568 ORTHO05D008804 2.4e-157 558.9 302 96.4
BraA06t23551Z Brassica rapa HOM05D001568 ORTHO05D008804 3.8e-155 551.6 309 94.5
Sp1g36840 Schrenkiella parvula HOM05D001568 ORTHO05D008804 5.2e-144 514.6 304 88.2
SpUn0137_0040 Schrenkiella parvula HOM05D001568 ORTHO05D008804 5.2e-144 514.6 304 88.2
BcaB07g33452 Brassica carinata HOM05D001568 ORTHO05D008804 1.2e-143 513.5 304 88.8
AL1G57570 Arabidopsis lyrata HOM05D001568 ORTHO05D008804 1.7e-142 509.6 305 87.5
Carub.0151s0002 Capsella rubella HOM05D001568 ORTHO05D008804 1.2e-140 503.4 304 85.9
AT1G50000 Arabidopsis thaliana HOM05D001568 ORTHO05D008804 3.5e-140 501.9 304 87.2
THA.LOC104826496 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 7.0e-117 424.5 303 75.2
Thhalv10011739m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 4.6e-116 421.8 231 91.8
THA.LOC104826495 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 1.1e-114 417.2 304 74.7
CARHR040100 Cardamine hirsuta HOM05D001568 ORTHO05D008804 1.1e-106 390.6 217 91.7
RcHm_v2.0_Chr6g0248601 Rosa chinensis HOM05D001568 ORTHO05D008804 1.2e-100 370.5 287 65.9
TWI14G1141 Tripterygium wilfordii HOM05D001568 ORTHO05D008804 1.6e-100 370.2 303 65.0
CSS0011887 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D008804 2.3e-99 366.3 291 65.6
Atru.chr5.2305 Acer truncatum HOM05D001568 ORTHO05D008804 3.0e-99 365.9 303 65.0
Ca_11027_v3 Cicer arietinum L. HOM05D001568 ORTHO05D008804 1.5e-98 363.6 279 67.0
Prupe.8G149200 Prunus persica HOM05D001568 ORTHO05D008804 1.5e-98 363.6 305 62.3
Thecc.02G119500 Theobroma cacao HOM05D001568 ORTHO05D008804 3.3e-98 362.5 303 63.4
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 5.6e-98 361.7 300 63.7
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 1.2e-97 360.5 299 65.6
Gorai.008G019500 Gossypium raimondii HOM05D001568 ORTHO05D008804 1.6e-97 360.1 303 63.4
CiPaw.05G020500 Carya illinoinensis HOM05D001568 ORTHO05D008804 2.1e-97 359.8 301 62.5
Haze_10309 Corylus avellana HOM05D001568 ORTHO05D008804 2.1e-97 359.8 304 62.5
Manes.07G057400 Manihot esculenta HOM05D001568 ORTHO05D008804 2.1e-97 359.8 303 62.7
TAR628G1281 Trochodendron aralioides HOM05D001568 ORTHO05D008804 4.7e-97 358.6 286 65.0
Actinidia04394 Actinidia chinensis HOM05D001568 ORTHO05D008804 1.8e-96 356.7 289 65.4
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 2.4e-96 356.3 302 63.2
Gohir.A12G018701 Gossypium hirsutum HOM05D001568 ORTHO05D008804 6.8e-96 354.8 303 62.0
Rhsim05G0092700 Rhododendron simsii HOM05D001568 ORTHO05D008804 6.8e-96 354.8 282 65.2
Aa31LG10G4130 Aethionema arabicum HOM05D001568 ORTHO05D008804 8.9e-96 354.4 207 87.0
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 1.2e-95 354.0 260 68.5
Nitab4.5_0010145g0020 Nicotiana tabacum HOM05D001568 ORTHO05D008804 1.5e-95 353.6 287 62.7
FvH4_2g03440 Fragaria vesca HOM05D001568 ORTHO05D008804 2.0e-95 353.2 301 62.1
EL10Ac9g22185 Beta vulgaris HOM05D001568 ORTHO05D008804 1.7e-94 350.1 286 63.3
Solyc01g106880.3 Solanum lycopersicum HOM05D001568 ORTHO05D008804 1.7e-94 350.1 299 60.9
Sopen01g049160 Solanum pennellii HOM05D001568 ORTHO05D008804 1.7e-94 350.1 295 61.7
TPR.G21139 Trifolium pratense HOM05D001568 ORTHO05D008804 1.7e-94 350.1 275 65.1
CANSAT25G3386 Cannabis sativa HOM05D001568 ORTHO05D008804 3.8e-94 349.0 303 61.7
Medtr1g106055 Medicago truncatula HOM05D001568 ORTHO05D008804 4.9e-94 348.6 262 66.4
Lj1g0020001 Lotus japonicus HOM05D001568 ORTHO05D008804 6.4e-94 348.2 284 64.1
Nitab4.5_0001099g0070 Nicotiana tabacum HOM05D001568 ORTHO05D008804 2.4e-93 346.3 264 64.8
CAN.G606.69 Capsicum annuum HOM05D001568 ORTHO05D008804 4.2e-93 345.5 297 60.9
HanXRQChr03g0072921 Helianthus annuus HOM05D001568 ORTHO05D008804 4.6e-92 342.0 260 66.9
VMungo0720G2114 Vigna mungo HOM05D001568 ORTHO05D008804 4.6e-92 342.0 286 64.7
Potri.001G290100 Populus trichocarpa HOM05D001568 ORTHO05D008804 1.0e-91 340.9 302 61.6
Aqoxy1G00265 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 1.3e-91 340.5 297 62.0
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 1.3e-91 340.5 296 61.1
Glyma.20G135600 Glycine max HOM05D001568 ORTHO05D008804 1.7e-91 340.1 285 63.9
ECA240G3857 Erigeron canadensis HOM05D001568 ORTHO05D008804 2.3e-91 339.7 272 64.7
COL.COLO4_32489 Corchorus olitorius HOM05D001568 ORTHO05D008804 8.7e-91 337.8 303 59.4
Cc00_g17990 Coffea canephora HOM05D001568 ORTHO05D008804 1.5e-90 337.0 298 61.1
Nn5g30645 Nelumbo nucifera HOM05D001568 ORTHO05D008804 1.9e-90 336.7 263 63.9
MELO3C018530.2 Cucumis melo HOM05D001568 ORTHO05D008804 2.5e-90 336.3 302 59.9
Migut.B00460 Erythranthe guttata HOM05D001568 ORTHO05D008804 2.5e-90 336.3 262 64.9
FAN15G2988 Fragaria x ananassa HOM05D001568 ORTHO05D008804 4.3e-90 335.5 231 71.0
PSO017G1092 Papaver somniferum HOM05D001568 ORTHO05D008804 5.6e-90 335.1 296 59.8
QL11p029473 Quercus lobata HOM05D001568 ORTHO05D008804 5.6e-90 335.1 331 55.0
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea HOM05D001568 ORTHO05D008804 7.3e-90 334.7 231 71.9
MD10G1109100 Malus domestica HOM05D001568 ORTHO05D008804 7.3e-90 334.7 230 70.0
CsaV3_7G007700 Cucumis sativus L. HOM05D001568 ORTHO05D008804 1.6e-89 333.6 305 59.0
Lalb_Chr06g0165001 Lupinus albus HOM05D001568 ORTHO05D008804 2.1e-89 333.2 284 62.7
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea HOM05D001568 ORTHO05D008804 3.6e-89 332.4 231 71.4
PSO170G6576 Papaver somniferum HOM05D001568 ORTHO05D008804 4.7e-89 332.0 296 59.5
Cfa004705 Carpinus fangiana HOM05D001568 ORTHO05D008804 1.5e-87 327.0 231 69.3
unitig_744.g24207 Utricularia gibba HOM05D001568 ORTHO05D008804 3.4e-87 325.9 276 62.7
MBI16_g16470_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D008804 4.4e-87 325.5 232 68.5
Lsat_1_v5_gn_9_113380 Lactuca sativa HOM05D001568 ORTHO05D008804 2.2e-86 323.2 276 62.3
Sc14g0002500 Simmondsia chinensis HOM05D001568 ORTHO05D008804 3.8e-86 322.4 260 64.6
Cfa004706 Carpinus fangiana HOM05D001568 ORTHO05D008804 4.9e-86 322.0 306 57.8
ATR0739G203 Amborella trichopoda HOM05D001568 ORTHO05D008804 2.4e-85 319.7 256 62.5
CDE04G1257 Ceratophyllum demersum HOM05D001568 ORTHO05D008804 1.6e-84 317.0 262 60.7
Lj9A337T44 Lonicera japonica HOM05D001568 ORTHO05D008804 1.3e-83 313.9 229 65.9
Gohir.D12G019200 Gossypium hirsutum HOM05D001568 ORTHO05D008804 2.3e-83 313.2 303 57.1
ClCG02G007120 Citrullus lanatus HOM05D001568 ORTHO05D008804 3.9e-83 312.4 298 57.7
DCAR_001738 Daucus carota HOM05D001568 ORTHO05D008804 8.7e-83 311.2 294 56.1
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 3.3e-82 309.3 273 60.4
SalBow6G4520 Salvia bowleyana HOM05D001568 ORTHO05D008804 4.3e-82 308.9 303 54.5
Peaxi162Scf00016g03020 Petunia axillaris HOM05D001568 ORTHO05D008804 1.8e-80 303.5 256 59.8
Os03g0729700 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D008804 3.4e-79 299.3 260 59.6
HPP92_026588 Vanilla planifolia HOM05D001568 ORTHO05D008804 7.6e-79 298.1 305 53.4
AUR62027019 Chenopodium quinoa HOM05D001568 ORTHO05D008804 2.2e-78 296.6 218 68.3
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 1.6e-76 290.4 204 70.6
Phvul.007G046900 Phaseolus vulgaris HOM05D001568 ORTHO05D008804 1.3e-73 280.8 238 62.2
AUR62030859 Chenopodium quinoa HOM05D001568 ORTHO05D008804 4.8e-73 278.9 206 67.5
THA.LOC104809178 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 4.8e-73 278.9 167 85.0
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 1.4e-72 277.3 262 57.6
PGR142G1084 Punica granatum HOM05D001568 ORTHO05D008804 8.4e-70 268.1 205 67.3
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis HOM05D001568 ORTHO05D008804 2.3e-67 260.0 254 53.5
Ah.01g007040 Amaranthus hybridus HOM05D001568 ORTHO05D008804 1.5e-63 247.3 183 64.5
Pp3c3_17050 Physcomitrium patens HOM05D001568 ORTHO05D008804 1.0e-62 244.6 262 49.2
FAN24G1144 Fragaria x ananassa HOM05D001568 ORTHO05D008804 2.9e-62 243.0 202 63.9
Psat6g214440 Pisum sativum HOM05D001568 ORTHO05D008804 3.2e-61 239.6 180 65.0
Sabra16G0181700 Salix brachista HOM05D001568 ORTHO05D008804 1.2e-60 237.7 218 58.7
Sed0001597 Sechium edule HOM05D001568 ORTHO05D008804 2.7e-60 236.5 305 46.6
Mapoly0081s0053 Marchantia polymorpha HOM05D001568 ORTHO05D008804 1.8e-59 233.8 255 47.1
SMO358G0428 Selaginella moellendorffii HOM05D001568 ORTHO05D008804 3.4e-55 219.5 256 46.9
CBR_g48696 Chara braunii HOM05D001568 ORTHO05D008804 2.5e-53 213.4 269 44.2
Aqoxy335s004 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 3.2e-45 186.4 134 67.9
Manes.10G086502 Manihot esculenta HOM05D001568 ORTHO05D008804 4.4e-42 176.0 285 39.3
TAR376G0809 Trochodendron aralioides HOM05D001568 ORTHO05D008804 9.1e-40 168.3 297 41.8
Thhalv10012254m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 4.5e-39 166.0 101 87.1
MCO02G312 Micromonas commoda HOM05D001568 ORTHO05D008804 6.3e-33 145.6 169 47.3
FAN24G0164 Fragaria x ananassa HOM05D001568 ORTHO05D008804 2.1e-28 130.6 106 60.4
MSTRG.20236 Avicennia marina HOM05D001568 ORTHO05D008804 1.7e-22 110.9 101 55.4
Cre03.g175800 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D008804 7.2e-21 105.5 336 28.9
PRCOL_00000434 Prasinoderma coloniale HOM05D001568 ORTHO05D008804 2.7e-20 103.6 200 38.5
Rhsim05G0092200 Rhododendron simsii HOM05D001568 ORTHO05D004404 5.0e-14 82.8 102 45.1
RhsimUnG0183700 Rhododendron simsii HOM05D002338 ORTHO05D006706 5.0e-14 82.8 102 45.1
RcHm_v2.0_Chr6g0248571 Rosa chinensis HOM05D001568 ORTHO05D008804 3.6e-12 76.6 110 50.0
C05p34140 Brassica napus HOM05D001568 ORTHO05D019891 1.0e-11 75.1 49 73.5
BcaC05g27454 Brassica carinata HOM05D001568 ORTHO05D019891 1.8e-11 74.3 49 71.4
BcaC05g27456 Brassica carinata HOM05D001568 ORTHO05D019891 1.8e-11 74.3 49 71.4
BolC5t32148H Brassica oleracea HOM05D058656 ORTHO05D019891 1.8e-11 74.3 49 71.4
Ah.01g007020 Amaranthus hybridus HOM05D001568 ORTHO05D008804 5.2e-11 72.8 48 70.8
Actinidia27998 Actinidia chinensis HOM05D001568 ORTHO05D008804 2.0e-07 60.8 52 59.6


User provided reference genes

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