Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p03550 Brassica napus HOM05D025309 ORTHO05D023871 7.8e-94 347.1 168 100.0
BolC6t35496H Brassica oleracea HOM05D025309 ORTHO05D023871 2.4e-87 325.5 170 93.5
BcaC08g43094 Brassica carinata HOM05D025309 ORTHO05D023871 2.0e-36 156.4 74 100.0
A06p04130 Brassica napus HOM05D000335 ORTHO05D003000 1.8e-21 106.7 152 44.1
BraA06t23618Z Brassica rapa HOM05D000335 ORTHO05D001251 1.8e-21 106.7 152 44.1
BcaC08g43089 Brassica carinata HOM05D000335 ORTHO05D001251 2.0e-20 103.2 152 43.4
C06p03480 Brassica napus HOM05D000335 ORTHO05D001251 2.0e-20 103.2 152 43.4
BolC6t35488H Brassica oleracea HOM05D000335 ORTHO05D001251 3.4e-20 102.4 152 42.8
BcaB07g33708 Brassica carinata HOM05D000335 ORTHO05D001251 1.6e-17 93.6 151 40.4
Sp1g35820 Schrenkiella parvula HOM05D000335 ORTHO05D001251 1.5e-15 87.0 152 38.2
Thhalv10012211m.g Eutrema salsugineum HOM05D000335 ORTHO05D001251 3.3e-15 85.9 152 38.2
C06p03610 Brassica napus HOM05D020121 ORTHO05D101991 2.3e-13 79.7 52 76.9
AT1G48910 Arabidopsis thaliana HOM05D000335 ORTHO05D001251 1.2e-12 77.4 152 37.5
AL1G55732 Arabidopsis lyrata HOM05D000335 ORTHO05D001251 4.9e-11 72.0 150 38.0
Carub.0001s3805 Capsella rubella HOM05D000335 ORTHO05D001251 2.4e-10 69.7 152 35.5
A04p08560 Brassica napus HOM05D025309 ORTHO05D023871 3.2e-10 69.3 35 88.6
CARHR038900 Cardamine hirsuta HOM05D000335 ORTHO05D001251 3.2e-10 69.3 152 34.9
Aa31LG10G5010 Aethionema arabicum HOM05D000335 ORTHO05D001251 5.9e-09 65.1 152 32.9
BcaC08g43091 Brassica carinata HOM05D029870 ORTHO05D021946 1.5e-07 60.5 110 38.2
BraA04t16550Z Brassica rapa HOM05D025309 ORTHO05D023871 2.5e-07 59.7 33 84.8
C06p03560 Brassica napus HOM05D000335 ORTHO05D021979 4.3e-07 58.9 46 60.9
C06p03620 Brassica napus HOM05D000335 ORTHO05D021979 9.5e-07 57.8 46 60.9
Psat5g220720 Pisum sativum HOM05D000335 ORTHO05D001251 2.8e-06 56.2 93 37.6
TPR.G26557 Trifolium pratense HOM05D000335 ORTHO05D001251 2.8e-06 56.2 93 35.5
Cfa018489 Carpinus fangiana HOM05D000335 ORTHO05D001251 4.7e-06 55.5 150 28.7


User provided reference genes

Program Settings