Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p03110 Brassica napus HOM05D000305 ORTHO05D032629 5.8e-39 163.7 79 100.0
BcaC08g43050 Brassica carinata HOM05D000305 ORTHO05D032629 6.0e-36 153.7 79 93.7
BraA01t02663Z Brassica rapa HOM05D000305 ORTHO05D032629 5.2e-32 140.6 75 89.3
BcaC04g19392 Brassica carinata HOM05D000305 ORTHO05D000065 1.3e-14 82.8 47 80.9
C09p56210 Brassica napus HOM05D000305 ORTHO05D000065 1.3e-14 82.8 47 80.9
BolC9t58490H Brassica oleracea HOM05D000305 ORTHO05D000065 1.3e-14 82.8 47 80.9
BcaC07g38384 Brassica carinata HOM05D000305 ORTHO05D000065 3.8e-14 81.3 47 78.7
C08p11410 Brassica napus HOM05D000305 ORTHO05D000065 3.8e-14 81.3 47 78.7
C05p38530 Brassica napus HOM05D000305 ORTHO05D000065 9.6e-10 66.6 44 63.6
BcaB06g27117 Brassica carinata HOM05D000305 ORTHO05D000065 2.8e-09 65.1 45 62.2
A02p15070 Brassica napus HOM05D000305 ORTHO05D000065 2.8e-09 65.1 43 62.8
C01p15600 Brassica napus HOM05D000305 ORTHO05D000065 2.8e-09 65.1 43 62.8
C01p42280 Brassica napus HOM05D000305 ORTHO05D000065 2.8e-09 65.1 43 62.8
BolC1t01512H Brassica oleracea HOM05D000305 ORTHO05D000065 2.8e-09 65.1 43 62.8
BraA02t06572Z Brassica rapa HOM05D000305 ORTHO05D000065 2.8e-09 65.1 43 62.8
BraA02t08923Z Brassica rapa HOM05D000305 ORTHO05D000065 2.8e-09 65.1 43 62.8
BcaC06g33835 Brassica carinata HOM05D000305 ORTHO05D000065 4.8e-09 64.3 67 47.8
BcaC06g33910 Brassica carinata HOM05D000305 ORTHO05D000065 4.8e-09 64.3 43 62.8
C02p35830 Brassica napus HOM05D000305 ORTHO05D000065 4.8e-09 64.3 43 62.8
C07p35400 Brassica napus HOM05D000305 ORTHO05D000065 4.8e-09 64.3 43 62.8
BcaC03g15517 Brassica carinata HOM05D000305 ORTHO05D000065 6.2e-09 63.9 43 62.8
BcaC03g17608 Brassica carinata HOM05D000305 ORTHO05D000065 6.2e-09 63.9 43 62.8
BcaC04g22115 Brassica carinata HOM05D000305 ORTHO05D000065 6.2e-09 63.9 47 55.3
BcaC08g43011 Brassica carinata HOM05D000305 ORTHO05D000065 6.2e-09 63.9 43 62.8
A02p19470 Brassica napus HOM05D000305 ORTHO05D000065 6.2e-09 63.9 43 62.8
A04p12480 Brassica napus HOM05D000305 ORTHO05D000065 6.2e-09 63.9 43 62.8
A09p22070 Brassica napus HOM05D000305 ORTHO05D000065 6.2e-09 63.9 43 62.8
C02p32000 Brassica napus HOM05D000305 ORTHO05D000065 6.2e-09 63.9 43 62.8
C03p71500 Brassica napus HOM05D000305 ORTHO05D000065 6.2e-09 63.9 43 62.8
C06p02640 Brassica napus HOM05D000305 ORTHO05D000065 6.2e-09 63.9 43 62.8
C08p05650 Brassica napus HOM05D000305 ORTHO05D000065 6.2e-09 63.9 43 62.8
C09p23180 Brassica napus HOM05D000305 ORTHO05D000065 6.2e-09 63.9 47 55.3
BolC2t09236H Brassica oleracea HOM05D000305 ORTHO05D000065 6.2e-09 63.9 43 62.8
BolC4t22863H Brassica oleracea HOM05D000305 ORTHO05D000065 6.2e-09 63.9 47 55.3
BolC7t44150H Brassica oleracea HOM05D000305 ORTHO05D000065 6.2e-09 63.9 43 62.8
A06p37930 Brassica napus HOM05D000305 ORTHO05D000065 8.1e-09 63.5 43 60.5
C05p06980 Brassica napus HOM05D000305 ORTHO05D000065 8.1e-09 63.5 43 60.5
C08p22620 Brassica napus HOM05D000305 ORTHO05D000065 1.1e-08 63.2 43 60.5
BolC8t49900H Brassica oleracea HOM05D000305 ORTHO05D000065 1.1e-08 63.2 43 60.5
BraA07t28677Z Brassica rapa HOM05D000305 ORTHO05D000065 1.1e-08 63.2 43 62.8
BcaC02g08369 Brassica carinata HOM05D000305 ORTHO05D000065 1.4e-08 62.8 43 62.8
BcaC08g44819 Brassica carinata HOM05D000305 ORTHO05D000065 1.4e-08 62.8 43 60.5
BcaC08g42909 Brassica carinata HOM05D000305 ORTHO05D000065 1.8e-08 62.4 43 58.1
BcaC09g51826 Brassica carinata HOM05D000305 ORTHO05D000065 1.8e-08 62.4 42 61.9
A07p08870 Brassica napus HOM05D000305 ORTHO05D000065 1.8e-08 62.4 43 62.8
C06p01460 Brassica napus HOM05D000305 ORTHO05D000065 1.8e-08 62.4 43 58.1
BcaC04g21173 Brassica carinata HOM05D000305 ORTHO05D000065 2.4e-08 62.0 43 58.1
C09p34550 Brassica napus HOM05D000305 ORTHO05D000065 2.4e-08 62.0 43 58.1
BraA05t20524Z Brassica rapa HOM05D000305 ORTHO05D000065 2.4e-08 62.0 43 62.8
BcaB06g26158 Brassica carinata HOM05D000305 ORTHO05D000065 3.1e-08 61.6 45 60.0
A01p02420 Brassica napus HOM05D000305 ORTHO05D000065 3.1e-08 61.6 46 54.3
A02p37630 Brassica napus HOM05D000305 ORTHO05D000065 3.1e-08 61.6 47 53.2
BolC6t37566H Brassica oleracea HOM05D000305 ORTHO05D000065 3.1e-08 61.6 43 60.5
BcaB02g11302 Brassica carinata HOM05D000305 ORTHO05D000065 5.3e-08 60.8 62 51.6
C03p52340 Brassica napus HOM05D000305 ORTHO05D000065 5.3e-08 60.8 43 60.5
BcaB07g31132 Brassica carinata HOM05D000305 ORTHO05D000065 6.9e-08 60.5 43 55.8
C05p46000 Brassica napus HOM05D000305 ORTHO05D000065 6.9e-08 60.5 73 39.7
BolC4t22871H Brassica oleracea HOM05D000305 ORTHO05D000065 6.9e-08 60.5 43 60.5
C05p45350 Brassica napus HOM05D000305 ORTHO05D000065 9.0e-08 60.1 47 55.3
BolC5t34199H Brassica oleracea HOM05D000305 ORTHO05D000065 9.0e-08 60.1 47 53.2
BcaC09g51318 Brassica carinata HOM05D000305 ORTHO05D000065 1.2e-07 59.7 47 53.2
BraA07t27792Z Brassica rapa HOM05D000305 ORTHO05D000065 1.5e-07 59.3 41 61.0
BcaC05g25373 Brassica carinata HOM05D000305 ORTHO05D000065 2.0e-07 58.9 45 57.8
C01p14460 Brassica napus HOM05D000305 ORTHO05D000065 2.0e-07 58.9 47 53.2
C04p38730 Brassica napus HOM05D000305 ORTHO05D000065 2.0e-07 58.9 42 57.1
BraA09t37473Z Brassica rapa HOM05D000305 ORTHO05D000065 2.0e-07 58.9 48 52.1
BcaB04g18069 Brassica carinata HOM05D000305 ORTHO05D000065 2.6e-07 58.5 57 47.4
C07p03560 Brassica napus HOM05D000305 ORTHO05D000065 2.6e-07 58.5 46 58.7
BolC7t40752H Brassica oleracea HOM05D000305 ORTHO05D000065 2.6e-07 58.5 46 58.7
BcaB06g26328 Brassica carinata HOM05D000305 ORTHO05D000065 3.4e-07 58.2 43 55.8
A07p19260 Brassica napus HOM05D000305 ORTHO05D000065 3.4e-07 58.2 47 53.2
A09p02610 Brassica napus HOM05D000305 ORTHO05D000065 3.4e-07 58.2 47 53.2
C03p85270 Brassica napus HOM05D000305 ORTHO05D000065 3.4e-07 58.2 47 53.2
A03p47920 Brassica napus HOM05D000305 ORTHO05D000065 4.5e-07 57.8 45 55.6
C03p53830 Brassica napus HOM05D000305 ORTHO05D000065 4.5e-07 57.8 45 55.6
BraA03t13901Z Brassica rapa HOM05D000305 ORTHO05D000065 4.5e-07 57.8 45 55.6
BcaC02g09128 Brassica carinata HOM05D000305 ORTHO05D000065 5.8e-07 57.4 42 54.8
BolC5t29618H Brassica oleracea HOM05D000305 ORTHO05D000065 5.8e-07 57.4 36 66.7
BolC8t52353H Brassica oleracea HOM05D000305 ORTHO05D000065 5.8e-07 57.4 36 66.7
C02p11180 Brassica napus HOM05D000305 ORTHO05D000065 7.6e-07 57.0 43 55.8
C02p61710 Brassica napus HOM05D000305 ORTHO05D000065 7.6e-07 57.0 46 52.2
BcaC08g43905 Brassica carinata HOM05D000305 ORTHO05D000065 9.9e-07 56.6 45 53.3
BcaC08g44031 Brassica carinata HOM05D000305 ORTHO05D000065 9.9e-07 56.6 42 54.8
C03p80600 Brassica napus HOM05D000305 ORTHO05D000065 9.9e-07 56.6 47 48.9
C04p22130 Brassica napus HOM05D000305 ORTHO05D000065 9.9e-07 56.6 47 48.9
C09p26940 Brassica napus HOM05D000305 ORTHO05D000065 9.9e-07 56.6 47 48.9
C06p10830 Brassica napus HOM05D000305 ORTHO05D000065 1.3e-06 56.2 45 53.3
BcaC03g17623 Brassica carinata HOM05D000305 ORTHO05D000065 1.7e-06 55.8 45 53.3
C03p60950 Brassica napus HOM05D000305 ORTHO05D000065 1.7e-06 55.8 46 56.5
C07p51960 Brassica napus HOM05D000305 ORTHO05D000065 1.7e-06 55.8 45 53.3
BcaC02g12440 Brassica carinata HOM05D000305 ORTHO05D000065 2.2e-06 55.5 51 49.0
BcaC09g50940 Brassica carinata HOM05D000305 ORTHO05D000065 2.2e-06 55.5 45 53.3
BolC6t36447H Brassica oleracea HOM05D000305 ORTHO05D000065 2.2e-06 55.5 44 52.3
BolC6t36641H Brassica oleracea HOM05D000305 ORTHO05D000065 2.2e-06 55.5 44 52.3
BcaC08g46382 Brassica carinata HOM05D000305 ORTHO05D000065 2.9e-06 55.1 47 55.3
C04p50320 Brassica napus HOM05D000305 ORTHO05D000065 2.9e-06 55.1 62 45.2
BolC4t26630H Brassica oleracea HOM05D000305 ORTHO05D000065 2.9e-06 55.1 62 45.2
BcaC01g03307 Brassica carinata HOM05D000305 ORTHO05D000065 3.8e-06 54.7 45 53.3
C03p87940 Brassica napus HOM05D000305 ORTHO05D000065 3.8e-06 54.7 70 44.3
C06p12940 Brassica napus HOM05D000305 ORTHO05D000065 3.8e-06 54.7 45 51.1
BcaB04g19199 Brassica carinata HOM05D000305 ORTHO05D000065 4.9e-06 54.3 45 53.3
A04p16430 Brassica napus HOM05D000305 ORTHO05D000065 4.9e-06 54.3 38 60.5
BraA05t19901Z Brassica rapa HOM05D000305 ORTHO05D000065 4.9e-06 54.3 48 47.9
BcaC05g27997 Brassica carinata HOM05D000305 ORTHO05D000065 6.4e-06 53.9 33 66.7
BolC3t17647H Brassica oleracea HOM05D000305 ORTHO05D000065 6.4e-06 53.9 37 64.9
BcaB03g16448 Brassica carinata HOM05D000305 ORTHO05D000065 8.4e-06 53.5 43 53.5
BcaC02g08949 Brassica carinata HOM05D000305 ORTHO05D000065 8.4e-06 53.5 43 53.5
BcaC03g14384 Brassica carinata HOM05D000305 ORTHO05D000065 8.4e-06 53.5 43 53.5
BcaC03g15241 Brassica carinata HOM05D000305 ORTHO05D000065 8.4e-06 53.5 43 53.5
BcaC03g17945 Brassica carinata HOM05D000305 ORTHO05D000065 8.4e-06 53.5 43 53.5
BcaC08g44063 Brassica carinata HOM05D000305 ORTHO05D000065 8.4e-06 53.5 44 50.0
BcaC08g46656 Brassica carinata HOM05D001630 ORTHO05D000065 8.4e-06 53.5 43 53.5
A09p07650 Brassica napus HOM05D000305 ORTHO05D000065 8.4e-06 53.5 43 53.5
A10p01000 Brassica napus HOM05D000305 ORTHO05D000065 8.4e-06 53.5 43 53.5
C02p17940 Brassica napus HOM05D000305 ORTHO05D000065 8.4e-06 53.5 43 53.5
C02p60070 Brassica napus HOM05D000305 ORTHO05D000065 8.4e-06 53.5 43 53.5
C04p48570 Brassica napus HOM05D000305 ORTHO05D000065 8.4e-06 53.5 43 53.5
BolC3t21007H Brassica oleracea HOM05D000305 ORTHO05D000065 8.4e-06 53.5 44 52.3
BolC4t26450H Brassica oleracea HOM05D000305 ORTHO05D000065 8.4e-06 53.5 43 53.5
BolC6t39668H Brassica oleracea HOM05D000305 ORTHO05D000065 8.4e-06 53.5 43 53.5
BraA05t19906Z Brassica rapa HOM05D000305 ORTHO05D000065 8.4e-06 53.5 43 53.5


User provided reference genes

Program Settings