Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 1.5e-181 639.4 328 100.0
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 1.5e-181 639.4 328 100.0
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 3.1e-179 631.7 334 97.9
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 1.7e-177 625.9 324 98.5
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 3.8e-177 624.8 328 97.3
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 5.0e-177 624.4 330 97.6
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 3.0e-174 615.1 328 95.1
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 1.1e-173 613.2 328 94.5
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 4.1e-171 604.7 324 93.8
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 2.0e-170 602.4 328 93.0
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 1.0e-169 600.1 323 94.1
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 1.9e-160 569.3 325 87.7
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 3.7e-148 528.5 319 83.1
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 7.3e-136 487.6 317 73.8
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 5.7e-133 478.0 318 73.6
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 9.8e-133 477.2 316 73.4
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 1.3e-132 476.9 316 72.8
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 3.7e-132 475.3 324 71.9
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 9.2e-131 470.7 317 73.5
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 1.2e-130 470.3 316 71.5
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 3.5e-130 468.8 316 71.8
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 5.9e-130 468.0 318 70.1
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 5.9e-130 468.0 318 70.1
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 7.8e-130 467.6 316 73.4
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 2.3e-129 466.1 319 69.6
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 3.0e-129 465.7 318 69.8
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 5.0e-129 464.9 316 70.9
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 6.6e-129 464.5 316 72.8
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 8.6e-129 464.2 316 73.1
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 1.9e-128 463.0 316 72.2
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 4.3e-128 461.8 316 71.5
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 9.5e-128 460.7 316 71.8
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.2e-127 460.3 318 71.4
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 1.2e-127 460.3 313 69.6
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 3.6e-127 458.8 315 72.7
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 6.2e-127 458.0 315 71.4
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 3.1e-126 455.7 316 70.3
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 6.8e-126 454.5 315 72.1
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 8.9e-126 454.1 319 68.3
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 2.0e-125 453.0 317 70.0
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 4.4e-125 451.8 319 71.2
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 1.7e-124 449.9 316 68.4
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 6.4e-124 448.0 316 70.3
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 1.1e-123 447.2 317 68.8
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 3.2e-123 445.7 316 70.6
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 3.2e-123 445.7 315 70.2
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.6e-122 443.4 316 68.4
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.6e-122 443.4 313 69.3
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 4.6e-122 441.8 316 69.6
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 7.8e-122 441.0 315 67.9
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 7.8e-122 441.0 316 66.5
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 1.0e-121 440.7 303 71.9
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 7.3e-120 434.5 316 67.4
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 9.5e-120 434.1 315 67.3
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 3.6e-119 432.2 314 68.8
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.7e-119 431.8 305 68.2
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.1e-118 430.6 316 67.1
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 1.1e-118 430.6 302 69.9
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 1.4e-118 430.3 323 66.6
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.3e-118 429.5 305 67.9
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 2.3e-118 429.5 303 69.3
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 6.8e-118 427.9 316 67.7
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.2e-117 427.2 337 63.5
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.3e-116 423.7 306 67.3
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 2.9e-116 422.5 296 69.6
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 3.7e-116 422.2 316 68.0
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 4.1e-115 418.7 312 66.0
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 5.4e-115 418.3 359 60.2
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 7.1e-115 417.9 319 63.9
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 9.2e-115 417.5 322 66.8
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 2.1e-114 416.4 316 65.2
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 6.0e-114 414.8 308 66.2
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 5.1e-113 411.8 270 74.1
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.5e-112 410.2 318 66.4
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 1.2e-111 407.1 302 66.9
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 3.1e-110 402.5 316 63.0
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 6.0e-106 388.3 316 62.7
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 7.8e-106 387.9 269 72.1
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 3.9e-105 385.6 305 63.6
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 1.5e-104 383.6 316 63.0
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 2.5e-104 382.9 202 92.6
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 9.6e-104 380.9 297 64.3
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 1.1e-99 367.5 337 57.9
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 7.8e-98 361.3 314 59.6
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 6.6e-97 358.2 255 70.6
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 8.7e-97 357.8 313 60.4
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.6e-93 346.3 270 65.6
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.6e-93 346.3 270 65.6
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 1.4e-91 340.5 246 65.9
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 6.0e-90 335.1 313 52.7
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 4.8e-87 325.5 232 66.4
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 6.9e-86 321.6 320 50.9
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 2.1e-82 310.1 256 62.1
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 4.3e-80 302.4 314 45.9
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 7.4e-80 301.6 314 46.5
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.8e-78 297.0 212 67.5
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 1.5e-77 293.9 316 49.7
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 1.9e-72 276.9 216 64.4
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 2.8e-71 273.1 180 72.2
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 5.9e-69 265.4 303 44.9
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.1e-67 261.2 232 56.0
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 3.9e-65 252.7 268 50.7
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 3.3e-64 249.6 330 45.8
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 1.7e-55 220.7 315 40.0
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 1.6e-50 204.1 145 69.0
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 1.6e-42 177.6 127 64.6
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 1.2e-40 171.4 129 62.8
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 3.7e-39 166.4 228 40.8
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 1.1e-30 138.3 247 35.6
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 1.6e-29 134.4 103 64.1
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.4e-22 110.5 93 57.0
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 3.1e-22 110.2 179 37.4
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 1.0e-20 105.1 87 59.8
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 2.3e-20 104.0 69 78.3
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.3e-07 61.6 70 48.6
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 7.0e-06 55.8 44 54.5


User provided reference genes

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