Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p02350 Brassica napus HOM05D008359 ORTHO05D010300 2.3e-20 103.2 81 100.0
BolC6t35360H Brassica oleracea HOM05D008359 ORTHO05D010300 2.3e-20 103.2 81 97.5
BcaC08g42993 Brassica carinata HOM05D008359 ORTHO05D010300 2.5e-19 99.8 81 96.3
Sp1g34910 Schrenkiella parvula HOM05D008359 ORTHO05D010300 2.0e-16 90.1 53 88.7
BraA06t23682Z Brassica rapa HOM05D008359 ORTHO05D010300 1.7e-15 87.0 82 91.5
A06p04780 Brassica napus HOM05D008359 ORTHO05D010300 8.4e-15 84.7 82 90.2
AT1G47970 Arabidopsis thaliana HOM05D008359 ORTHO05D010300 2.4e-14 83.2 53 86.8
CARHR037590 Cardamine hirsuta HOM05D008359 ORTHO05D010300 2.4e-14 83.2 54 83.3
AL1G54480 Arabidopsis lyrata HOM05D008359 ORTHO05D010300 1.6e-13 80.5 54 83.3
BcaB07g33802 Brassica carinata HOM05D008359 ORTHO05D010300 5.1e-12 75.5 81 85.2
Aa31LG10G5820 Aethionema arabicum HOM05D000167 ORTHO05D000465 9.0e-09 64.7 42 81.0
Carub.0001s3705 Capsella rubella HOM05D008359 ORTHO05D010300 5.8e-08 62.0 44 75.0
Haze_01345 Corylus avellana HOM05D008359 ORTHO05D010300 2.2e-07 60.1 29 96.6
MD16G1149800 Malus domestica HOM05D008359 ORTHO05D010300 3.8e-07 59.3 53 64.2
SGA_v2.0_scaffold246G44799 Striga asiatica HOM05D008359 ORTHO05D010300 8.4e-07 58.2 31 87.1
CANSAT78G0680 Cannabis sativa HOM05D008359 ORTHO05D010300 1.1e-06 57.8 29 89.7
unitig_749.g13356 Utricularia gibba HOM05D008359 ORTHO05D010300 1.4e-06 57.4 58 62.1
Nitab4.5_0000289g0010 Nicotiana tabacum HOM05D008359 ORTHO05D010300 1.9e-06 57.0 31 87.1
PGR031G3777 Punica granatum HOM05D008359 ORTHO05D010300 1.9e-06 57.0 29 89.7
Prupe.1G113500 Prunus persica HOM05D008359 ORTHO05D010300 2.5e-06 56.6 35 77.1
Migut.N00029 Erythranthe guttata HOM05D008359 ORTHO05D010300 3.2e-06 56.2 35 77.1
SGA_v2.0_scaffold227G43229 Striga asiatica HOM05D008359 ORTHO05D010300 4.2e-06 55.8 38 76.3
FAN07G0737 Fragaria x ananassa HOM05D008359 ORTHO05D010300 5.5e-06 55.5 29 86.2
FAN12G0153 Fragaria x ananassa HOM05D008359 ORTHO05D010300 5.5e-06 55.5 29 86.2
Lj3P834T33 Lonicera japonica HOM05D008359 ORTHO05D010300 5.5e-06 55.5 28 89.3
Oeu044729.1 Olea europaea HOM05D008359 ORTHO05D010300 5.5e-06 55.5 29 86.2
RcHm_v2.0_Chr4g0425941 Rosa chinensis HOM05D008359 ORTHO05D010300 5.5e-06 55.5 29 86.2
Duzib212G0105 Durio zibethinus HOM05D008359 ORTHO05D010300 9.3e-06 54.7 53 62.3


User provided reference genes

Program Settings