Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 5.6e-112 407.5 194 100.0
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 2.4e-110 402.1 194 97.9
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 9.3e-99 363.6 199 88.4
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 4.6e-98 361.3 194 89.7
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 1.3e-95 353.2 199 86.4
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 4.1e-94 348.2 194 85.1
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 4.1e-94 348.2 194 85.1
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 1.4e-86 323.2 194 78.4
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 5.3e-86 321.2 195 80.0
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 1.1e-80 303.5 195 73.8
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 7.0e-78 294.3 196 74.0
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 9.1e-78 293.9 195 73.8
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 8.5e-68 260.8 190 69.5
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 9.8e-56 220.7 198 58.6
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 7.8e-37 157.9 200 45.5
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.3e-36 157.1 200 45.5
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 1.3e-36 157.1 200 45.5
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 2.5e-35 152.9 191 47.1
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 3.3e-35 152.5 201 42.8
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 7.3e-35 151.4 191 48.2
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 7.3e-35 151.4 191 48.2
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 1.1e-33 147.5 197 41.1
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 1.8e-33 146.7 161 49.1
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 4.0e-33 145.6 198 44.4
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 4.0e-33 145.6 196 43.4
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 4.4e-32 142.1 193 41.5
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 9.8e-32 141.0 203 40.9
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 2.2e-31 139.8 199 42.2
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 9.2e-30 134.4 186 42.5
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 9.2e-30 134.4 186 42.5
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 1.2e-29 134.0 202 40.1
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 2.1e-29 133.3 191 39.8
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 4.6e-29 132.1 186 42.5
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 7.8e-29 131.3 193 38.3
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 1.0e-28 131.0 203 41.4
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 3.0e-28 129.4 190 43.7
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 3.9e-28 129.0 199 41.2
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 8.6e-28 127.9 196 40.8
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 1.1e-27 127.5 191 41.4
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 1.1e-27 127.5 191 41.4
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.5e-27 127.1 195 39.5
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 1.9e-27 126.7 205 39.0
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 3.3e-27 125.9 203 38.4
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 5.6e-27 125.2 195 39.0
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 9.5e-27 124.4 203 36.9
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 1.2e-26 124.0 203 40.4
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.6e-26 123.6 199 39.2
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 1.6e-26 123.6 196 39.3
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 2.8e-26 122.9 198 37.4
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.1e-25 120.9 195 39.5
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 1.4e-25 120.6 200 41.0
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 2.3e-25 119.8 192 38.5
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 2.3e-25 119.8 199 38.2
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 2.3e-25 119.8 188 40.4
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 3.1e-25 119.4 190 36.8
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 4.0e-25 119.0 207 36.7
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 5.2e-25 118.6 192 40.1
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 1.5e-24 117.1 194 35.6
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.5e-24 117.1 195 39.0
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 5.8e-24 115.2 202 37.1
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 5.8e-24 115.2 191 38.2
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 2.9e-23 112.8 196 38.8
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 4.9e-23 112.1 195 36.9
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 4.9e-23 112.1 196 37.2
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 4.9e-23 112.1 200 35.5
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 1.1e-22 110.9 202 39.6
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.9e-22 110.2 193 38.9
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 2.4e-22 109.8 193 36.3
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 4.1e-22 109.0 195 37.4
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 4.1e-22 109.0 195 37.4
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 7.1e-22 108.2 194 37.6
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 9.2e-22 107.8 192 35.9
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 9.2e-22 107.8 192 38.0
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 1.6e-21 107.1 193 39.4
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 6.0e-21 105.1 113 49.6
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 6.0e-21 105.1 196 35.2
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 1.0e-20 104.4 206 36.9
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 1.7e-20 103.6 186 36.6
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 3.0e-20 102.8 194 36.1
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 3.0e-20 102.8 176 40.9
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 3.0e-20 102.8 109 51.4
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 3.9e-20 102.4 190 36.3
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 6.6e-20 101.7 193 35.2
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 6.6e-20 101.7 198 33.3
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 4.3e-19 99.0 192 35.9
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 5.6e-19 98.6 197 36.0
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 5.6e-19 98.6 186 36.6
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 7.3e-19 98.2 185 34.6
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 9.6e-19 97.8 198 34.3
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.6e-18 97.1 195 34.4
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 6.2e-18 95.1 112 46.4
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 8.1e-18 94.7 197 34.5
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 8.1e-18 94.7 209 34.9
BolC8t47476H Brassica oleracea HOM05D006157 ORTHO05D007826 1.1e-17 94.4 70 68.6
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 1.1e-17 94.4 100 50.0
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 1.8e-17 93.6 199 34.7
C08p06300 Brassica napus HOM05D006157 ORTHO05D007826 2.4e-17 93.2 70 67.1
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 2.4e-17 93.2 201 37.3
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 3.1e-17 92.8 189 38.1
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 4.0e-17 92.4 192 34.4
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 1.2e-16 90.9 197 35.5
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 2.6e-16 89.7 200 34.0
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 2.6e-16 89.7 183 37.7
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 2.6e-16 89.7 196 33.7
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 2.6e-16 89.7 190 36.3
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 3.4e-16 89.4 189 32.8
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 3.4e-16 89.4 177 34.5
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 4.9e-15 85.5 198 33.3
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 5.4e-14 82.0 181 32.0
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 5.4e-14 82.0 181 32.0
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 7.1e-14 81.6 195 33.3
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 6.0e-13 78.6 181 33.7
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 1.0e-12 77.8 95 46.3
BolC6t35322H Brassica oleracea HOM05D006157 ORTHO05D007826 2.3e-12 76.6 34 100.0
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 1.9e-11 73.6 165 33.3
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 1.8e-09 67.0 144 30.6
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 1.2e-08 64.3 186 28.5
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 9.9e-08 61.2 77 37.7
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 6.4e-07 58.5 136 35.3
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 8.4e-07 58.2 77 37.7
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 8.4e-07 58.2 189 28.6


User provided reference genes

Program Settings