Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p00830 Brassica napus HOM05D008384 ORTHO05D009842 7.2e-98 360.5 176 100.0
C03p31500 Brassica napus HOM05D015892 ORTHO05D009842 4.3e-58 228.4 177 64.4
BraA04t16529Z Brassica rapa HOM05D015892 ORTHO05D009842 1.0e-56 223.8 177 65.5
C07p60290 Brassica napus HOM05D015892 ORTHO05D009842 2.3e-56 222.6 181 62.4
C04p42370 Brassica napus HOM05D015892 ORTHO05D009842 2.6e-55 219.2 182 62.6
BcaC01g03468 Brassica carinata HOM05D008384 ORTHO05D009842 6.2e-49 198.0 113 81.4
BcaC01g04977 Brassica carinata HOM05D015892 ORTHO05D009842 4.0e-48 195.3 177 58.8
BcaC03g14591 Brassica carinata HOM05D008384 ORTHO05D009842 3.7e-38 162.2 145 57.9
BraA01t02884Z Brassica rapa HOM05D015892 ORTHO05D009842 7.8e-28 127.9 102 62.7
C01p40360 Brassica napus HOM05D008384 ORTHO05D009842 8.7e-27 124.4 144 40.3
BolC2t07876H Brassica oleracea HOM05D008384 ORTHO05D009842 2.5e-26 122.9 144 41.7
C07p35890 Brassica napus HOM05D008384 ORTHO05D016044 1.6e-25 120.2 144 41.7
BcaB07g31665 Brassica carinata HOM05D008384 ORTHO05D009842 2.1e-25 119.8 144 41.0
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 4.7e-25 118.6 144 39.6
BcaB01g01529 Brassica carinata HOM05D008384 ORTHO05D009842 1.1e-24 117.5 144 41.7
BcaC08g45148 Brassica carinata HOM05D008384 ORTHO05D009842 2.9e-22 109.4 144 38.2
BolC2t10222H Brassica oleracea HOM05D008384 ORTHO05D009842 1.1e-21 107.5 126 45.2
C03p24860 Brassica napus HOM05D008384 ORTHO05D009842 5.4e-21 105.1 125 44.0
SpUn0001_0070 Schrenkiella parvula HOM05D008384 ORTHO05D009842 1.3e-19 100.5 99 47.5
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 2.3e-19 99.8 144 38.2
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 3.9e-19 99.0 144 38.2
BcaB03g14887 Brassica carinata HOM05D008384 ORTHO05D009842 8.7e-19 97.8 106 42.5
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 8.7e-19 97.8 126 37.3
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 8.7e-19 97.8 126 37.3
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 2.5e-18 96.3 126 34.9
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 7.3e-18 94.7 139 34.5
A05p23770 Brassica napus HOM05D006289 ORTHO05D042070 7.3e-18 94.7 126 35.7
BraA05t21247Z Brassica rapa HOM05D006289 ORTHO05D042070 7.3e-18 94.7 126 35.7
BcaB06g27189 Brassica carinata HOM05D066470 ORTHO05D009842 9.6e-18 94.4 154 37.0
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 9.6e-18 94.4 139 32.4
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 1.3e-17 94.0 126 34.9
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 1.3e-17 94.0 139 31.7
BolC7t41062H Brassica oleracea HOM05D008384 ORTHO05D009842 1.6e-17 93.6 106 43.4
BraA10t42593Z Brassica rapa HOM05D006289 ORTHO05D009842 3.6e-17 92.4 120 36.7
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 6.2e-17 91.7 139 33.8
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 1.1e-16 90.9 126 33.3
BcaB05g23720 Brassica carinata HOM05D008384 ORTHO05D009842 2.4e-16 89.7 97 48.5
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 2.4e-16 89.7 126 34.9
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 4.0e-16 89.0 139 31.7
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 6.9e-16 88.2 154 32.5
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 6.9e-16 88.2 126 34.9
C09p22240 Brassica napus HOM05D008384 ORTHO05D016044 9.0e-16 87.8 98 45.9
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 1.2e-15 87.4 144 31.2
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 1.2e-15 87.4 126 34.1
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 1.2e-15 87.4 126 34.1
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 2.0e-15 86.7 126 32.5
BolC3t15496H Brassica oleracea HOM05D015892 ORTHO05D009842 2.0e-15 86.7 92 51.1
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 2.6e-15 86.3 142 30.3
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 2.6e-15 86.3 142 30.3
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 3.4e-15 85.9 139 30.9
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 4.5e-15 85.5 139 30.2
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 7.6e-15 84.7 126 31.7
BcaB07g33986 Brassica carinata HOM05D008384 ORTHO05D009842 9.9e-15 84.3 130 34.6
BolC1t03992H Brassica oleracea HOM05D008384 ORTHO05D009842 9.9e-15 84.3 98 40.8
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 1.3e-14 84.0 142 30.3
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 2.2e-14 83.2 139 31.7
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 2.2e-14 83.2 128 31.2
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 2.2e-14 83.2 142 29.6
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 2.9e-14 82.8 142 30.3
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 3.8e-14 82.4 140 31.4
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 3.8e-14 82.4 140 31.4
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 3.8e-14 82.4 140 31.4
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 4.9e-14 82.0 144 34.0
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 4.9e-14 82.0 128 32.0
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 6.4e-14 81.6 139 29.5
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 8.4e-14 81.3 142 29.6
C01p21290 Brassica napus HOM05D006289 ORTHO05D009842 1.1e-13 80.9 142 28.9
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 1.1e-13 80.9 126 34.9
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 1.4e-13 80.5 154 31.2
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 1.4e-13 80.5 138 31.9
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 1.4e-13 80.5 146 34.2
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 1.4e-13 80.5 139 33.1
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 1.4e-13 80.5 139 33.1
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 1.4e-13 80.5 142 30.3
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 2.4e-13 79.7 134 29.9
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 2.4e-13 79.7 146 33.6
BcaC05g27687 Brassica carinata HOM05D005627 ORTHO05D021837 4.2e-13 79.0 130 27.7
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 4.2e-13 79.0 130 27.7
BcaC04g20562 Brassica carinata HOM05D006289 ORTHO05D016037 5.4e-13 78.6 95 33.7
BcaC05g27035 Brassica carinata HOM05D006289 ORTHO05D032057 7.1e-13 78.2 126 36.5
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 7.1e-13 78.2 126 29.4
C05p28920 Brassica napus HOM05D006289 ORTHO05D032057 7.1e-13 78.2 126 36.5
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 7.1e-13 78.2 126 36.5
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 9.3e-13 77.8 128 30.5
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 9.3e-13 77.8 130 30.0
BraA02t08906Z Brassica rapa HOM05D005627 ORTHO05D019933 1.2e-12 77.4 126 29.4
A10p07450 Brassica napus HOM05D006289 ORTHO05D009842 1.6e-12 77.0 107 32.7
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 2.1e-12 76.6 130 26.9
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 2.7e-12 76.3 126 27.8
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 3.5e-12 75.9 128 30.5
C09p37890 Brassica napus HOM05D013280 ORTHO05D011792 3.5e-12 75.9 114 35.1
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 3.5e-12 75.9 144 33.3
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 4.6e-12 75.5 140 30.7
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 4.6e-12 75.5 143 28.7
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 4.6e-12 75.5 126 27.8
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 6.0e-12 75.1 126 34.9
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 6.0e-12 75.1 140 31.4
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 7.9e-12 74.7 146 32.9
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 7.9e-12 74.7 146 32.2
BcaB07g33659 Brassica carinata HOM05D008384 ORTHO05D009842 1.0e-11 74.3 108 34.3
C09p31540 Brassica napus HOM05D008384 ORTHO05D042359 1.3e-11 73.9 129 34.1
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 1.3e-11 73.9 128 31.2
BcaC08g46979 Brassica carinata HOM05D005627 ORTHO05D019933 1.8e-11 73.6 127 29.9
BcaB07g33633 Brassica carinata HOM05D008384 ORTHO05D009842 3.9e-11 72.4 93 40.9
C09p30140 Brassica napus HOM05D005627 ORTHO05D042654 3.9e-11 72.4 128 28.1
BcaB01g01127 Brassica carinata HOM05D006289 ORTHO05D017564 6.7e-11 71.6 128 31.2
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 6.7e-11 71.6 140 30.0
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 6.7e-11 71.6 126 27.8
BolC4t22910H Brassica oleracea HOM05D005627 ORTHO05D011792 6.7e-11 71.6 144 32.6
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 6.7e-11 71.6 127 27.6
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 8.7e-11 71.2 126 28.6
BcaB02g10993 Brassica carinata HOM05D005627 ORTHO05D013519 8.7e-11 71.2 124 25.8
BolC9t56010H Brassica oleracea HOM05D008384 ORTHO05D042359 1.5e-10 70.5 125 32.8
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 3.3e-10 69.3 133 31.6
A03p31870 Brassica napus HOM05D005627 ORTHO05D027884 4.3e-10 68.9 142 28.9
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 4.3e-10 68.9 142 28.9
BcaB07g33832 Brassica carinata HOM05D008384 ORTHO05D009842 5.6e-10 68.6 131 35.9
BraA06t24543Z Brassica rapa HOM05D005627 ORTHO05D027884 7.4e-10 68.2 142 28.9
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 9.6e-10 67.8 118 28.0
BolC2t11345H Brassica oleracea HOM05D008384 ORTHO05D009842 9.6e-10 67.8 90 40.0
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 1.6e-09 67.0 114 28.9
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-09 67.0 126 27.8
BraA01t02229Z Brassica rapa HOM05D005627 ORTHO05D013519 1.6e-09 67.0 126 27.8
C07p07500 Brassica napus HOM05D013280 ORTHO05D011792 2.1e-09 66.6 144 32.6
BolC5t30494H Brassica oleracea HOM05D006289 ORTHO05D009842 2.8e-09 66.2 95 30.5
BcaB08g34625 Brassica carinata HOM05D008384 ORTHO05D009842 3.7e-09 65.9 81 45.7
C04p40320 Brassica napus HOM05D009418 ORTHO05D018626 4.8e-09 65.5 126 28.6
Sp4g09860 Schrenkiella parvula HOM05D005627 ORTHO05D011792 8.1e-09 64.7 111 34.2
A07p06840 Brassica napus HOM05D008384 ORTHO05D009842 1.1e-08 64.3 126 33.3
BolC3t18952H Brassica oleracea HOM05D006289 ORTHO05D017568 1.1e-08 64.3 126 28.6
A01p27450 Brassica napus HOM05D015892 ORTHO05D009842 1.4e-08 63.9 66 51.5
C01p43410 Brassica napus HOM05D006289 ORTHO05D017568 1.4e-08 63.9 126 28.6
BolC7t41649H Brassica oleracea HOM05D005627 ORTHO05D027884 1.4e-08 63.9 126 28.6
BcaB04g18138 Brassica carinata HOM05D005627 ORTHO05D013519 2.4e-08 63.2 91 30.8
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 2.4e-08 63.2 93 31.2
A06p26790 Brassica napus HOM05D005627 ORTHO05D021837 4.0e-08 62.4 123 25.2
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 4.0e-08 62.4 97 34.0
C06p06910 Brassica napus HOM05D005627 ORTHO05D013519 6.9e-08 61.6 91 28.6
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 6.9e-08 61.6 107 27.1
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 6.9e-08 61.6 107 27.1
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 9.0e-08 61.2 95 30.5
BraA04t18196Z Brassica rapa HOM05D005627 ORTHO05D027884 9.0e-08 61.2 121 28.9
C01p10680 Brassica napus HOM05D005627 ORTHO05D011792 1.2e-07 60.8 63 39.7
BcaB01g01613 Brassica carinata HOM05D006289 ORTHO05D009842 1.3e-06 57.4 80 35.0
BcaB04g18536 Brassica carinata HOM05D005627 ORTHO05D009842 1.7e-06 57.0 126 31.7
BcaNung05731 Brassica carinata HOM05D005627 ORTHO05D011976 2.9e-06 56.2 76 36.8
A05p13630 Brassica napus HOM05D006289 ORTHO05D027692 2.9e-06 56.2 126 28.6
C05p38720 Brassica napus HOM05D034814 ORTHO05D039365 3.8e-06 55.8 58 39.7
C06p18890 Brassica napus HOM05D008838 ORTHO05D017578 4.9e-06 55.5 85 30.6


User provided reference genes

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