Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p00300 Brassica napus HOM05D013073 ORTHO05D014961 2.0e-103 379.0 184 100.0
C05p14270 Brassica napus HOM05D013073 ORTHO05D014961 1.2e-95 353.2 175 98.3
C09p15390 Brassica napus HOM05D013073 ORTHO05D014961 6.4e-65 251.1 175 77.1
C03p60280 Brassica napus HOM05D013073 ORTHO05D014961 2.1e-60 236.1 129 94.6
BcaC08g44111 Brassica carinata HOM05D013073 ORTHO05D014961 3.1e-43 179.1 133 75.2
BcaC08g42818 Brassica carinata HOM05D013073 ORTHO05D014961 2.2e-41 172.9 79 100.0
BcaC01g02794 Brassica carinata HOM05D013073 ORTHO05D014961 4.3e-37 158.7 133 69.9
BraA09t37035Z Brassica rapa HOM05D013073 ORTHO05D014961 1.9e-29 133.3 85 84.7
BolSC21t60235H Brassica oleracea HOM05D013073 ORTHO05D014961 3.2e-24 115.9 77 81.8
BcaC02g09245 Brassica carinata HOM05D013073 ORTHO05D014961 7.2e-24 114.8 137 54.7
C04p63810 Brassica napus HOM05D005716 ORTHO05D007885 2.0e-21 106.7 55 87.3
BolC4t27848H Brassica oleracea HOM05D005716 ORTHO05D007885 2.0e-21 106.7 55 87.3
BraA04t18144Z Brassica rapa HOM05D005716 ORTHO05D007885 2.0e-21 106.7 55 87.3
Aa31LG10G6910 Aethionema arabicum HOM05D005716 ORTHO05D007885 2.5e-21 106.3 55 85.5
Sp4g16740 Schrenkiella parvula HOM05D005716 ORTHO05D007885 5.7e-21 105.1 55 85.5
Thhalv10017058m.g Eutrema salsugineum HOM05D005716 ORTHO05D007885 7.4e-21 104.8 55 85.5
AL4G30440 Arabidopsis lyrata HOM05D005716 ORTHO05D007885 1.7e-20 103.6 55 85.5
BcaB06g28772 Brassica carinata HOM05D005716 ORTHO05D007885 1.7e-20 103.6 55 85.5
CARHR128550 Cardamine hirsuta HOM05D005716 ORTHO05D007885 1.7e-20 103.6 55 85.5
Solyc02g070670.4 Solanum lycopersicum HOM05D005716 ORTHO05D007885 2.2e-20 103.2 55 83.6
Sopen02g019750 Solanum pennellii HOM05D005716 ORTHO05D007885 2.2e-20 103.2 55 83.6
Carub.0004s1614 Capsella rubella HOM05D005716 ORTHO05D007885 4.8e-20 102.1 55 83.6
AT2G34470 Arabidopsis thaliana HOM05D005716 ORTHO05D007885 6.3e-20 101.7 55 83.6
THA.LOC104812667 Tarenaya hassleriana HOM05D005716 ORTHO05D007885 1.1e-19 100.9 55 81.8
CAN.G650.23 Capsicum annuum HOM05D005716 ORTHO05D007885 2.4e-19 99.8 55 80.0
PGSC0003DMG400008287 Solanum tuberosum HOM05D005716 ORTHO05D007885 2.4e-19 99.8 55 81.8
Atru.chr10.1272 Acer truncatum HOM05D005716 ORTHO05D007885 3.1e-19 99.4 55 80.0
Lj1A1186G50 Lonicera japonica HOM05D005716 ORTHO05D007885 3.1e-19 99.4 60 75.0
MD05G1285700 Malus domestica HOM05D005716 ORTHO05D007885 3.1e-19 99.4 55 80.0
arahy.Tifrunner.gnm1.ann1.16PV68 Arachis hypogaea HOM05D005716 ORTHO05D007885 5.3e-19 98.6 55 80.0
arahy.Tifrunner.gnm1.ann1.MD42KV Arachis hypogaea HOM05D005716 ORTHO05D007885 5.3e-19 98.6 55 80.0
CiPaw.09G125500 Carya illinoinensis HOM05D005716 ORTHO05D007885 5.3e-19 98.6 55 81.8
ATR0585G042 Amborella trichopoda HOM05D005716 ORTHO05D007885 6.9e-19 98.2 55 78.2
TAR627G0480 Trochodendron aralioides HOM05D005716 ORTHO05D007885 9.1e-19 97.8 60 75.0
Dinv30726 Davidia involucrata HOM05D005716 ORTHO05D014961 1.2e-18 97.4 55 80.0
QL05p058825 Quercus lobata HOM05D005716 ORTHO05D007885 1.2e-18 97.4 55 80.0
QL05p058849 Quercus lobata HOM05D005716 ORTHO05D007885 1.2e-18 97.4 55 80.0
CSS0037137 Camellia sinensis var. sinensis HOM05D005716 ORTHO05D007885 2.0e-18 96.7 55 80.0
Manes.17G068800 Manihot esculenta HOM05D005716 ORTHO05D007885 2.0e-18 96.7 55 78.2
PGR042G3684 Punica granatum HOM05D005716 ORTHO05D007885 2.0e-18 96.7 55 76.4
MD10G1263700 Malus domestica HOM05D005716 ORTHO05D007885 2.6e-18 96.3 55 78.2
Peaxi162Scf00022g00310 Petunia axillaris HOM05D005716 ORTHO05D007885 2.6e-18 96.3 60 73.3
GSVIVG01021429001 Vitis vinifera HOM05D005716 ORTHO05D007885 2.6e-18 96.3 55 78.2
CANSAT80G0786 Cannabis sativa HOM05D005716 ORTHO05D007885 3.4e-18 95.9 55 74.5
Ciclev10016173m.g Citrus clementina HOM05D005716 ORTHO05D007885 3.4e-18 95.9 55 78.2
Glyma.08G084800 Glycine max HOM05D005716 ORTHO05D007885 3.4e-18 95.9 55 78.2
Oeu030916.2 Olea europaea HOM05D005716 ORTHO05D007885 3.4e-18 95.9 111 53.2
SGA_v2.0_scaffold106G30642 Striga asiatica HOM05D005716 ORTHO05D007885 3.4e-18 95.9 55 76.4
Duzib235G0716 Durio zibethinus HOM05D005716 ORTHO05D007885 4.5e-18 95.5 60 73.3
MBI07_g15285_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 4.5e-18 95.5 55 78.2
MBI07_g26370_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 4.5e-18 95.5 55 78.2
Nitab4.5_0005219g0060 Nicotiana tabacum HOM05D005716 ORTHO05D007885 4.5e-18 95.5 55 76.4
EL10Ac8g19740 Beta vulgaris HOM05D005716 ORTHO05D007885 5.9e-18 95.1 55 78.2
Gohir.A10G039600 Gossypium hirsutum HOM05D005716 ORTHO05D007885 5.9e-18 95.1 55 78.2
Gohir.D10G040400 Gossypium hirsutum HOM05D005716 ORTHO05D007885 5.9e-18 95.1 55 78.2
Gorai.011G042600 Gossypium raimondii HOM05D005716 ORTHO05D007885 5.9e-18 95.1 55 78.2
Rhsim07G0173200 Rhododendron simsii HOM05D005716 ORTHO05D007885 5.9e-18 95.1 55 74.5
TWI53G0431 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 5.9e-18 95.1 55 78.2
Prupe.4G079000 Prunus persica HOM05D005716 ORTHO05D007885 7.7e-18 94.7 54 79.6
Thecc.06G152400 Theobroma cacao HOM05D005716 ORTHO05D007885 7.7e-18 94.7 55 76.4
vmacro17882 Vaccinium macrocarpon HOM05D005716 ORTHO05D007885 7.7e-18 94.7 55 74.5
MSTRG.13250 Avicennia marina HOM05D005716 ORTHO05D007885 1.0e-17 94.4 55 78.2
Cpa.g.sc166.24 Carica papaya HOM05D005716 ORTHO05D007885 1.0e-17 94.4 53 79.2
Migut.H01369 Erythranthe guttata HOM05D005716 ORTHO05D007885 1.0e-17 94.4 55 76.4
SalBow7G1512 Salvia bowleyana HOM05D005716 ORTHO05D007885 1.0e-17 94.4 55 76.4
TWI09G1196 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 1.0e-17 94.4 55 78.2
Actinidia07685 Actinidia chinensis HOM05D005716 ORTHO05D007885 1.3e-17 94.0 55 78.2
CDE02G4127 Ceratophyllum demersum HOM05D005716 ORTHO05D007885 1.3e-17 94.0 55 76.4
Cc09_g09370 Coffea canephora HOM05D005716 ORTHO05D007885 1.3e-17 94.0 55 76.4
Lalb_Chr07g0188621 Lupinus albus HOM05D005716 ORTHO05D007885 1.3e-17 94.0 55 76.4
RcHm_v2.0_Chr5g0013751 Rosa chinensis HOM05D005716 ORTHO05D007885 1.3e-17 94.0 55 76.4
MELO3C002721.2 Cucumis melo HOM05D005716 ORTHO05D007885 1.7e-17 93.6 55 76.4
CsaV3_1G032590 Cucumis sativus L. HOM05D005716 ORTHO05D007885 1.7e-17 93.6 55 76.4
Eucgr.E02383 Eucalyptus grandis HOM05D005716 ORTHO05D007885 1.7e-17 93.6 55 74.5
Eucgr.E02408 Eucalyptus grandis HOM05D005716 ORTHO05D007885 1.7e-17 93.6 55 74.5
Phvul.002G193800 Phaseolus vulgaris HOM05D005716 ORTHO05D007885 1.7e-17 93.6 55 80.0
Sc05g0006370 Simmondsia chinensis HOM05D005716 ORTHO05D007885 1.7e-17 93.6 55 76.4
VMungo0251G2847 Vigna mungo HOM05D005716 ORTHO05D007885 1.7e-17 93.6 55 80.0
DCAR_005122 Daucus carota HOM05D005716 ORTHO05D007885 2.2e-17 93.2 55 74.5
FvH4_3g05780 Fragaria vesca HOM05D005716 ORTHO05D007885 2.2e-17 93.2 55 74.5
FAN11G1575 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.2e-17 93.2 55 74.5
FAN16G2159 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.2e-17 93.2 55 74.5
FAN21G0047 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.2e-17 93.2 55 74.5
FAN25G0382 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.2e-17 93.2 55 74.5
unitig_32.g11441 Utricularia gibba HOM05D005716 ORTHO05D007885 2.2e-17 93.2 55 74.5
PSO017G0333 Papaver somniferum HOM05D005716 ORTHO05D007885 2.9e-17 92.8 55 74.5
Nn3g20701 Nelumbo nucifera HOM05D005716 ORTHO05D007885 3.8e-17 92.4 53 75.5
Potri.002G243500 Populus trichocarpa HOM05D005716 ORTHO05D007885 3.8e-17 92.4 60 70.0
Potri.002G243700 Populus trichocarpa HOM05D005716 ORTHO05D007885 3.8e-17 92.4 60 70.0
Sabra02G0185400 Salix brachista HOM05D005716 ORTHO05D007885 3.8e-17 92.4 60 70.0
Aqoxy4G00105 Aquilegia oxysepala HOM05D005716 ORTHO05D007885 5.0e-17 92.0 55 72.7
HPP92_010050 Vanilla planifolia HOM05D005716 ORTHO05D007885 8.5e-17 91.3 55 74.5
Lsat_1_v5_gn_1_96721 Lactuca sativa HOM05D005716 ORTHO05D007885 1.1e-16 90.9 55 72.7
SEGI_04817 Sequoiadendron giganteum HOM05D005716 ORTHO05D007885 1.1e-16 90.9 75 57.3
TPR.G4903 Trifolium pratense HOM05D005716 ORTHO05D007885 1.1e-16 90.9 55 74.5
Ca_18267_v3 Cicer arietinum L. HOM05D005716 ORTHO05D007885 1.4e-16 90.5 55 74.5
COL.COLO4_31094 Corchorus olitorius HOM05D005716 ORTHO05D007885 1.4e-16 90.5 55 74.5
Medtr4g096770 Medicago truncatula HOM05D005716 ORTHO05D007885 1.4e-16 90.5 55 74.5
Psat7g090160 Pisum sativum HOM05D005716 ORTHO05D007885 1.4e-16 90.5 55 74.5
HanXRQChr08g0230021 Helianthus annuus HOM05D005716 ORTHO05D007885 1.9e-16 90.1 55 70.9
ECA232G4567 Erigeron canadensis HOM05D005716 ORTHO05D007885 3.2e-16 89.4 55 69.1
TWI09G0986 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 3.2e-16 89.4 55 74.5
AUR62027525 Chenopodium quinoa HOM05D005716 ORTHO05D007885 7.2e-16 88.2 53 77.4
Dinv32271 Davidia involucrata HOM05D005716 ORTHO05D007885 9.4e-16 87.8 50 78.0
ClCG03G007040 Citrullus lanatus HOM05D005716 ORTHO05D007885 1.2e-15 87.4 52 75.0
SMO353G0068 Selaginella moellendorffii HOM05D005716 ORTHO05D007885 2.1e-15 86.7 56 67.9
Mapoly0128s0016 Marchantia polymorpha HOM05D005716 ORTHO05D007885 4.7e-15 85.5 56 64.3
Pp3c24_19130 Physcomitrium patens HOM05D005716 ORTHO05D007885 2.3e-14 83.2 55 65.5
AagrBONN_evm.TU.Sc2ySwM_117.3588 Anthoceros agrestis HOM05D005716 ORTHO05D007885 1.7e-12 77.0 53 66.0
MCO04G141 Micromonas commoda HOM05D005716 ORTHO05D007885 2.8e-12 76.3 56 60.7
PSO478G1410 Papaver somniferum HOM05D005716 ORTHO05D007885 2.4e-11 73.2 55 61.8
AUR62030221 Chenopodium quinoa HOM05D005716 ORTHO05D007885 5.3e-11 72.0 53 66.0
Sed0010647 Sechium edule HOM05D005716 ORTHO05D007885 7.0e-11 71.6 55 61.8
CBR_g38955 Chara braunii HOM05D005716 ORTHO05D007885 5.5e-08 62.0 55 54.5
Os05g0565200 Oryza sativa ssp. japonica HOM05D005716 ORTHO05D007885 1.2e-07 60.8 55 58.2
Zm00001eb343840 Zea mays HOM05D005716 ORTHO05D007885 3.0e-06 56.2 37 70.3


User provided reference genes

Program Settings