Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung06046 Brassica carinata HOM05D014685 ORTHO05D011865 1.2e-64 249.6 123 100.0
C06p00110 Brassica napus HOM05D014685 ORTHO05D011865 1.2e-64 249.6 123 100.0
C06p00010 Brassica napus HOM05D014685 ORTHO05D011865 6.2e-64 247.3 123 99.2
BcaC08g42791 Brassica carinata HOM05D014685 ORTHO05D011865 3.2e-60 235.0 116 99.1
C03p25280 Brassica napus HOM05D014685 ORTHO05D011865 1.3e-50 203.0 117 84.6
BolC3t14922H Brassica oleracea HOM05D014685 ORTHO05D011865 1.3e-50 203.0 117 84.6
A03p21410 Brassica napus HOM05D014187 ORTHO05D011865 2.5e-49 198.7 117 82.1
BraA03t11376Z Brassica rapa HOM05D014685 ORTHO05D011865 2.5e-49 198.7 117 82.1
Thhalv10006280m.g Eutrema salsugineum HOM05D014685 ORTHO05D011865 2.1e-19 99.4 122 43.4
A06p29690 Brassica napus HOM05D019266 ORTHO05D011865 1.8e-15 86.3 111 47.7
BraA06t25916Z Brassica rapa HOM05D019266 ORTHO05D011865 1.8e-15 86.3 111 47.7
BcaC04g21246 Brassica carinata HOM05D019266 ORTHO05D011865 7.7e-14 80.9 84 51.2
C09p33900 Brassica napus HOM05D019266 ORTHO05D011865 7.7e-14 80.9 84 51.2
BolC9t56226H Brassica oleracea HOM05D019266 ORTHO05D011865 1.2e-11 73.6 77 49.4
AL7G33110 Arabidopsis lyrata HOM05D019266 ORTHO05D011865 7.9e-11 70.9 124 35.5
CARHR043790 Cardamine hirsuta HOM05D001456 ORTHO05D011865 3.0e-10 68.9 128 39.1
AL8G40910 Arabidopsis lyrata HOM05D001456 ORTHO05D013730 4.8e-08 61.6 120 36.7
AL8G41190 Arabidopsis lyrata HOM05D001456 ORTHO05D013730 2.4e-07 59.3 123 35.0
BcaB05g22721 Brassica carinata HOM05D014685 ORTHO05D011865 3.1e-07 58.9 44 70.5
CARHR172830 Cardamine hirsuta HOM05D001456 ORTHO05D011865 5.9e-06 54.7 127 35.4


User provided reference genes

Program Settings