Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p63290 Brassica napus HOM05D001733 ORTHO05D001882 8.9e-119 430.3 213 100.0
BolC5t34992H Brassica oleracea HOM05D001733 ORTHO05D001882 2.6e-118 428.7 213 99.5
BcaC05g29865 Brassica carinata HOM05D001733 ORTHO05D001882 4.9e-117 424.5 213 98.1
BcaC01g04396 Brassica carinata HOM05D001733 ORTHO05D001882 1.5e-113 412.9 208 97.1
A03p33340 Brassica napus HOM05D001733 ORTHO05D001882 1.5e-113 412.9 208 97.1
BolC3t16323H Brassica oleracea HOM05D001733 ORTHO05D001882 1.5e-113 412.9 208 97.1
C03p40580 Brassica napus HOM05D001733 ORTHO05D001882 5.6e-113 411.0 208 96.6
BraA03t12505Z Brassica rapa HOM05D001733 ORTHO05D001882 5.6e-113 411.0 208 96.6
A05p43710 Brassica napus HOM05D001733 ORTHO05D001882 7.3e-113 410.6 205 98.5
BcaC05g30264 Brassica carinata HOM05D001733 ORTHO05D001882 6.2e-112 407.5 207 96.1
BraA05t23110Z Brassica rapa HOM05D001733 ORTHO05D001882 1.1e-111 406.8 205 98.0
Carub.0003s0276 Capsella rubella HOM05D001733 ORTHO05D001882 1.4e-111 406.4 208 94.2
AL3G13370 Arabidopsis lyrata HOM05D001733 ORTHO05D001882 3.1e-111 405.2 208 93.8
Thhalv10021487m.g Eutrema salsugineum HOM05D001733 ORTHO05D001882 5.2e-111 404.4 207 94.7
Sp3g02590 Schrenkiella parvula HOM05D001733 ORTHO05D001882 5.2e-111 404.4 209 92.8
AT3G03600 Arabidopsis thaliana HOM05D001733 ORTHO05D001882 6.8e-111 404.1 208 93.3
CARHR077640 Cardamine hirsuta HOM05D001733 ORTHO05D001882 2.0e-110 402.5 208 93.3
Aa31LG5G14110 Aethionema arabicum HOM05D001733 ORTHO05D001882 4.6e-107 391.3 208 90.4
THA.LOC104820811 Tarenaya hassleriana HOM05D001733 ORTHO05D001882 5.4e-100 367.9 212 82.5
BcaB04g19363 Brassica carinata HOM05D001733 ORTHO05D001882 1.8e-90 336.3 208 82.2
Cpa.g.sc73.32 Carica papaya HOM05D001733 ORTHO05D001882 4.2e-76 288.5 209 66.0
MD02G1230600 Malus domestica HOM05D001733 ORTHO05D001882 4.3e-73 278.5 212 63.2
Ciclev10023278m.g Citrus clementina HOM05D001733 ORTHO05D001882 2.2e-72 276.2 209 64.6
Eucgr.D01117 Eucalyptus grandis HOM05D001733 ORTHO05D001882 4.8e-72 275.0 204 67.6
Lj1g0025923 Lotus japonicus HOM05D001733 ORTHO05D001882 6.3e-72 274.6 211 64.0
TWI39G0742 Tripterygium wilfordii HOM05D001733 ORTHO05D001882 5.3e-71 271.6 209 63.2
Manes.08G156000 Manihot esculenta HOM05D001733 ORTHO05D001882 6.9e-71 271.2 212 62.7
Atru.chr9.238 Acer truncatum HOM05D001733 ORTHO05D001882 2.0e-70 269.6 211 61.6
Cfa003706 Carpinus fangiana HOM05D001733 ORTHO05D001882 2.6e-70 269.2 204 64.2
Haze_15782 Corylus avellana HOM05D001733 ORTHO05D001882 2.6e-70 269.2 204 63.7
RcHm_v2.0_Chr1g0341081 Rosa chinensis HOM05D001733 ORTHO05D001882 3.4e-70 268.9 212 59.9
TWI73G0070 Tripterygium wilfordii HOM05D001733 ORTHO05D001882 7.7e-70 267.7 210 61.0
PGR044G0034 Punica granatum HOM05D001733 ORTHO05D001882 1.7e-69 266.5 211 63.0
CiPaw.02G047900 Carya illinoinensis HOM05D001733 ORTHO05D001882 2.9e-69 265.8 204 63.2
Prupe.2G107500 Prunus persica HOM05D001733 ORTHO05D001882 5.0e-69 265.0 200 63.5
Sabra13G0060700 Salix brachista HOM05D001733 ORTHO05D001882 1.1e-68 263.8 204 62.7
Lsat_1_v5_gn_7_34060 Lactuca sativa HOM05D001733 ORTHO05D001882 1.4e-68 263.5 208 62.5
QL08p048200 Quercus lobata HOM05D001733 ORTHO05D001882 2.5e-68 262.7 207 62.8
Potri.013G070001 Populus trichocarpa HOM05D001733 ORTHO05D001882 1.2e-67 260.4 211 60.7
Lalb_Chr23g0264941 Lupinus albus HOM05D001733 ORTHO05D001882 2.1e-67 259.6 203 61.6
Cc02_g26570 Coffea canephora HOM05D001733 ORTHO05D001882 2.7e-67 259.2 208 61.5
Sed0021856 Sechium edule HOM05D001733 ORTHO05D001882 2.7e-67 259.2 203 61.6
ClCG08G014080 Citrullus lanatus HOM05D001733 ORTHO05D001882 3.6e-67 258.8 203 60.6
Psat5g001280 Pisum sativum HOM05D001733 ORTHO05D001882 3.6e-67 258.8 207 59.4
HanXRQChr04g0117601 Helianthus annuus HOM05D001733 ORTHO05D001882 1.4e-66 256.9 210 59.5
CANSAT78G1742 Cannabis sativa HOM05D001733 ORTHO05D001882 1.8e-66 256.5 197 61.4
FvH4_7g08140 Fragaria vesca HOM05D001733 ORTHO05D001882 1.8e-66 256.5 213 58.7
FAN06G0601 Fragaria x ananassa HOM05D001733 ORTHO05D001882 1.8e-66 256.5 213 58.7
FAN03G0842 Fragaria x ananassa HOM05D001733 ORTHO05D001882 2.3e-66 256.1 213 58.7
FAN01G0027 Fragaria x ananassa HOM05D001733 ORTHO05D001882 3.0e-66 255.8 213 58.7
Ca_15286_v3 Cicer arietinum L. HOM05D001733 ORTHO05D001882 3.9e-66 255.4 207 58.0
Ca_15422_v3 Cicer arietinum L. HOM05D001733 ORTHO05D001882 3.9e-66 255.4 207 58.0
FAN10G0402 Fragaria x ananassa HOM05D001733 ORTHO05D001882 3.9e-66 255.4 213 58.2
Gorai.007G250600 Gossypium raimondii HOM05D001733 ORTHO05D001882 3.9e-66 255.4 207 58.9
Hund19368 Selenicereus undatus HOM05D001733 ORTHO05D001882 5.1e-66 255.0 203 59.6
Gohir.D11G237300 Gossypium hirsutum HOM05D001733 ORTHO05D001882 6.7e-66 254.6 207 58.9
Dinv43956 Davidia involucrata HOM05D001733 ORTHO05D001882 8.8e-66 254.2 211 60.2
Gohir.A11G224218 Gossypium hirsutum HOM05D001733 ORTHO05D001882 8.8e-66 254.2 207 59.4
Lj7P561T30 Lonicera japonica HOM05D001733 ORTHO05D001882 8.8e-66 254.2 204 60.3
Phvul.009G117800 Phaseolus vulgaris HOM05D001733 ORTHO05D001882 1.5e-65 253.4 202 60.4
DCAR_029572 Daucus carota HOM05D001733 ORTHO05D001882 2.0e-65 253.1 206 60.2
VMungo1309G3105 Vigna mungo HOM05D001733 ORTHO05D001882 2.0e-65 253.1 209 58.9
CSS0001376 Camellia sinensis var. sinensis HOM05D001733 ORTHO05D001882 3.3e-65 252.3 202 61.9
CSS0011354 Camellia sinensis var. sinensis HOM05D001733 ORTHO05D001882 3.3e-65 252.3 202 61.9
Medtr3g118200 Medicago truncatula HOM05D001733 ORTHO05D001882 3.3e-65 252.3 199 60.8
Thecc.05G236000 Theobroma cacao HOM05D001733 ORTHO05D001882 4.3e-65 251.9 210 57.6
Glyma.06G001900 Glycine max HOM05D001733 ORTHO05D001882 5.7e-65 251.5 211 58.3
Solyc01g081520.3 Solanum lycopersicum HOM05D001733 ORTHO05D001882 9.7e-65 250.8 208 58.7
Sopen01g033080 Solanum pennellii HOM05D001733 ORTHO05D001882 9.7e-65 250.8 208 58.7
PGSC0003DMG401031123 Solanum tuberosum HOM05D001733 ORTHO05D001882 1.7e-64 250.0 203 59.6
Duzib106G0611 Durio zibethinus HOM05D001733 ORTHO05D001882 2.2e-64 249.6 210 58.6
CsaV3_2G024360 Cucumis sativus L. HOM05D001733 ORTHO05D001882 3.7e-64 248.8 203 60.1
arahy.Tifrunner.gnm1.ann1.A8CT9J Arachis hypogaea HOM05D001733 ORTHO05D001882 4.8e-64 248.4 208 58.2
AUR62020701 Chenopodium quinoa HOM05D001733 ORTHO05D001882 4.8e-64 248.4 207 57.5
Nitab4.5_0000792g0200 Nicotiana tabacum HOM05D001733 ORTHO05D001882 8.2e-64 247.7 203 59.6
AUR62028023 Chenopodium quinoa HOM05D001733 ORTHO05D001882 1.8e-63 246.5 207 57.0
MELO3C011346.2 Cucumis melo HOM05D001733 ORTHO05D001882 3.1e-63 245.7 203 57.6
Nitab4.5_0007787g0030 Nicotiana tabacum HOM05D001733 ORTHO05D001882 5.3e-63 245.0 208 57.7
vmacro15942 Vaccinium macrocarpon HOM05D001733 ORTHO05D001882 6.9e-63 244.6 219 56.6
EL10Ac2g03646 Beta vulgaris HOM05D001733 ORTHO05D001882 1.2e-62 243.8 211 54.0
TAR362G0336 Trochodendron aralioides HOM05D001733 ORTHO05D001882 2.0e-62 243.0 200 59.0
Oeu060721.2 Olea europaea HOM05D001733 ORTHO05D001882 6.5e-61 238.0 202 57.4
Aqoxy7G03741 Aquilegia oxysepala HOM05D001733 ORTHO05D001882 8.5e-61 237.7 203 59.6
Sc06g0001410 Simmondsia chinensis HOM05D001733 ORTHO05D001882 8.5e-61 237.7 206 55.3
COL.COLO4_21825 Corchorus olitorius HOM05D001733 ORTHO05D001882 4.2e-60 235.3 203 53.2
MSTRG.20625 Avicennia marina HOM05D001733 ORTHO05D001882 5.5e-60 235.0 208 55.8
ECA236G4258 Erigeron canadensis HOM05D000200 ORTHO05D000262 9.4e-60 234.2 191 61.3
Migut.B01416 Erythranthe guttata HOM05D001733 ORTHO05D001882 1.6e-59 233.4 212 51.9
SGA_v2.0_scaffold98G29368 Striga asiatica HOM05D001733 ORTHO05D001882 3.9e-58 228.8 206 52.9
Rhsim07G0048200 Rhododendron simsii HOM05D001733 ORTHO05D001882 3.3e-57 225.7 202 55.4
SalBow5G0061 Salvia bowleyana HOM05D001733 ORTHO05D001882 9.7e-57 224.2 211 51.2
unitig_0.g1363 Utricularia gibba HOM05D001733 ORTHO05D001882 1.7e-56 223.4 200 52.5
Actinidia26430 Actinidia chinensis HOM05D001733 ORTHO05D001882 4.7e-51 205.3 173 57.8
Nn044s41810 Nelumbo nucifera HOM05D001733 ORTHO05D001882 3.1e-47 192.6 200 50.0
Nn1g10086 Nelumbo nucifera HOM05D001733 ORTHO05D001882 3.1e-47 192.6 200 50.0
Ah.13g073670 Amaranthus hybridus HOM05D001733 ORTHO05D001882 7.0e-47 191.4 167 56.3
Cc08_g05780 Coffea canephora HOM05D001733 ORTHO05D001882 2.7e-46 189.5 171 57.9
Cc05_g05120 Coffea canephora HOM05D001733 ORTHO05D001882 3.5e-46 189.1 171 57.9
RcHm_v2.0_Chr1g0383121 Rosa chinensis HOM05D001733 ORTHO05D001882 2.2e-45 186.4 198 49.5
vmacro13603 Vaccinium macrocarpon HOM05D001733 ORTHO05D001882 3.2e-44 182.6 203 48.3
RcHm_v2.0_Chr2g0085551 Rosa chinensis HOM05D001733 ORTHO05D001882 1.2e-43 180.6 144 59.0
SEGI_38852 Sequoiadendron giganteum HOM05D001733 ORTHO05D001882 6.8e-42 174.9 210 42.9
RcHm_v2.0_Chr1g0363821 Rosa chinensis HOM05D001733 ORTHO05D001882 8.3e-40 167.9 149 54.4
RcHm_v2.0_Chr5g0027611 Rosa chinensis HOM05D001733 ORTHO05D001882 4.5e-38 162.2 113 62.8
TPR.G38482 Trifolium pratense HOM05D001733 ORTHO05D001882 1.0e-37 161.0 207 43.0
RcHm_v2.0_Chr3g0481141 Rosa chinensis HOM05D001733 ORTHO05D001882 2.2e-37 159.8 140 54.3
RcHm_v2.0_Chr6g0246101 Rosa chinensis HOM05D001733 ORTHO05D001882 2.0e-33 146.7 113 58.4
CAN.G1249.13 Capsicum annuum HOM05D001733 ORTHO05D001882 3.7e-32 142.5 113 57.5
AagrBONN_evm.TU.Sc2ySwM_228.194 Anthoceros agrestis HOM05D001733 ORTHO05D001882 2.4e-31 139.8 222 34.2
arahy.Tifrunner.gnm1.ann1.VEWU5V Arachis hypogaea HOM05D001733 ORTHO05D001882 7.7e-30 134.8 103 61.2
RcHm_v2.0_Chr5g0054321 Rosa chinensis HOM05D001733 ORTHO05D001882 4.7e-27 125.6 113 51.3
HanXRQChr16g0501591 Helianthus annuus HOM05D001733 ORTHO05D001882 7.5e-25 118.2 96 58.3
Peaxi162Scf01260g00014 Petunia axillaris HOM05D001733 ORTHO05D001882 9.8e-25 117.9 88 61.4
BcaC02g09516 Brassica carinata HOM05D001733 ORTHO05D001882 4.6e-22 109.0 81 71.6
A01p19710 Brassica napus HOM05D001733 ORTHO05D001882 1.1e-20 104.4 56 91.1
C04p32130 Brassica napus HOM05D001733 ORTHO05D001882 1.1e-20 104.4 52 98.1
C04p54460 Brassica napus HOM05D001733 ORTHO05D001882 1.9e-20 103.6 53 96.2
BolC4t25944H Brassica oleracea HOM05D001733 ORTHO05D001882 2.5e-20 103.2 52 96.2
C03p74560 Brassica napus HOM05D001733 ORTHO05D001882 7.3e-20 101.7 52 94.2
Zm00001eb385930 Zea mays HOM05D022646 ORTHO05D001882 4.0e-18 95.9 96 51.0
Zm00001eb436200 Zea mays HOM05D022646 ORTHO05D001882 4.0e-18 95.9 96 51.0
Zm00001eb436250 Zea mays HOM05D022646 ORTHO05D001882 4.0e-18 95.9 96 51.0
Zm00001eb436290 Zea mays HOM05D022646 ORTHO05D001882 4.0e-18 95.9 96 51.0
Zm00001eb436330 Zea mays HOM05D022646 ORTHO05D001882 4.0e-18 95.9 96 51.0
arahy.Tifrunner.gnm1.ann1.3YR680 Arachis hypogaea HOM05D001733 ORTHO05D001882 3.7e-16 89.4 70 58.6
RcHm_v2.0_Chr5g0036111 Rosa chinensis HOM05D001733 ORTHO05D001882 2.4e-15 86.7 140 36.4
arahy.Tifrunner.gnm1.ann1.BIR89S Arachis hypogaea HOM05D001903 ORTHO05D001847 8.3e-08 61.6 81 43.2
Mapoly0051s0114 Marchantia polymorpha HOM05D052641 ORTHO05D001882 4.1e-07 59.3 74 43.2
Gorai.008G076300 Gossypium raimondii HOM05D001733 ORTHO05D047820 9.2e-07 58.2 41 58.5
ATR0660G006 Amborella trichopoda HOM05D001733 ORTHO05D001882 1.6e-06 57.4 47 51.1
Gohir.D12G069601 Gossypium hirsutum HOM05D001733 ORTHO05D047820 2.7e-06 56.6 41 56.1


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