Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p62360 Brassica napus HOM05D008295 ORTHO05D010471 2.3e-40 168.3 78 100.0
C05p62380 Brassica napus HOM05D008295 ORTHO05D010471 2.3e-40 168.3 78 100.0
BcaC05g29971 Brassica carinata HOM05D008295 ORTHO05D010471 1.3e-38 162.5 78 96.2
A05p42650 Brassica napus HOM05D008295 ORTHO05D010471 1.3e-38 162.5 78 96.2
BraA05t22988Z Brassica rapa HOM05D008295 ORTHO05D010471 1.3e-38 162.5 78 96.2
BcaC05g29925 Brassica carinata HOM05D008295 ORTHO05D010471 2.2e-38 161.8 78 93.6
BolC5t34892H Brassica oleracea HOM05D008295 ORTHO05D010471 2.2e-38 161.8 78 93.6
C05p62320 Brassica napus HOM05D008295 ORTHO05D010471 2.8e-38 161.4 78 93.6
A05p42640 Brassica napus HOM05D008295 ORTHO05D010471 4.8e-38 160.6 78 94.9
BraA05t22987Z Brassica rapa HOM05D008295 ORTHO05D010471 4.8e-38 160.6 78 94.9
BraA05t22989Z Brassica rapa HOM05D008295 ORTHO05D010471 4.8e-38 160.6 78 94.9
C02p26540 Brassica napus HOM05D008295 ORTHO05D010471 8.2e-38 159.8 78 94.9
BcaC05g29923 Brassica carinata HOM05D008295 ORTHO05D010471 1.4e-37 159.1 78 92.3
A02p15960 Brassica napus HOM05D008295 ORTHO05D010471 2.4e-37 158.3 78 93.6
BolC2t08725H Brassica oleracea HOM05D008295 ORTHO05D010471 2.4e-37 158.3 78 93.6
BcaC03g15093 Brassica carinata HOM05D008295 ORTHO05D010471 2.0e-36 155.2 78 92.3
BraA02t06655Z Brassica rapa HOM05D008295 ORTHO05D010471 2.6e-36 154.8 78 91.0
BolC5t34888H Brassica oleracea HOM05D008295 ORTHO05D010471 3.5e-36 154.5 79 91.1
BcaB05g24460 Brassica carinata HOM05D008295 ORTHO05D010471 4.7e-33 144.1 78 84.6
AT3G04945 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 1.7e-22 109.0 74 68.9
Thhalv10022226m.g Eutrema salsugineum HOM05D008295 ORTHO05D010471 2.8e-22 108.2 78 65.4
BcaC01g04340 Brassica carinata HOM05D008295 ORTHO05D010471 7.0e-21 103.6 78 65.4
C03p41320 Brassica napus HOM05D008295 ORTHO05D010471 7.0e-21 103.6 78 65.4
BolC3t16414H Brassica oleracea HOM05D008295 ORTHO05D010471 7.0e-21 103.6 78 65.4
A03p33940 Brassica napus HOM05D008295 ORTHO05D010471 9.1e-21 103.2 78 64.1
BraA03t12569Z Brassica rapa HOM05D008295 ORTHO05D010471 9.1e-21 103.2 78 64.1
BcaC01g04341 Brassica carinata HOM05D008295 ORTHO05D010471 1.6e-20 102.4 78 65.4
A03p33930 Brassica napus HOM05D008295 ORTHO05D010471 1.6e-20 102.4 78 64.1
C03p41310 Brassica napus HOM05D008295 ORTHO05D010471 1.6e-20 102.4 78 65.4
BraA03t12568Z Brassica rapa HOM05D008295 ORTHO05D010471 1.6e-20 102.4 78 64.1
BolC3t16413H Brassica oleracea HOM05D008295 ORTHO05D010471 3.5e-20 101.3 78 65.4
AL3G15280 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 1.6e-17 92.4 74 60.8
C05p62350 Brassica napus HOM05D008295 ORTHO05D010471 6.8e-16 87.0 78 56.4
BcaB04g19287 Brassica carinata HOM05D008295 ORTHO05D010471 2.6e-15 85.1 78 53.8
AT3G04943 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 2.9e-14 81.6 79 50.6
AT3G23165 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 3.7e-14 81.3 78 52.6
AL3G37770 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 8.3e-14 80.1 75 52.0
BolC5t34889H Brassica oleracea HOM05D008295 ORTHO05D010471 8.3e-14 80.1 55 58.2
AL3G15270 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 1.2e-12 76.3 79 50.6
CSS0021153 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 5.9e-12 73.9 75 42.7
CSS0043617 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 1.7e-11 72.4 82 46.3
TWI56G0380 Tripterygium wilfordii HOM05D008295 ORTHO05D010471 1.7e-11 72.4 75 45.3
AL3G37780 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 2.9e-11 71.6 78 47.4
CARHR079250 Cardamine hirsuta HOM05D008295 ORTHO05D010471 2.9e-11 71.6 73 49.3
Eucgr.H04400 Eucalyptus grandis HOM05D008295 ORTHO05D010471 3.9e-11 71.2 66 45.5
Manes.09G157700 Manihot esculenta HOM05D008295 ORTHO05D010471 1.9e-10 68.9 72 40.3
PGR004G0687 Punica granatum HOM05D008295 ORTHO05D010471 1.9e-10 68.9 69 46.4
Potri.013G032700 Populus trichocarpa HOM05D008295 ORTHO05D010471 2.5e-10 68.6 72 47.2
QL04p009826 Quercus lobata HOM05D008295 ORTHO05D010471 2.5e-10 68.6 72 43.1
Sabra13G0032600 Salix brachista HOM05D008295 ORTHO05D010471 9.5e-10 66.6 85 44.7
Duzib106G0032 Durio zibethinus HOM05D008295 ORTHO05D010471 1.6e-09 65.9 76 38.2
CiPaw.07G008800 Carya illinoinensis HOM05D008295 ORTHO05D010471 4.7e-09 64.3 69 39.1
CiPaw.08G178100 Carya illinoinensis HOM05D008295 ORTHO05D010471 8.0e-09 63.5 78 42.3
CSS0023258 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 1.0e-08 63.2 58 50.0
Sed0007183 Sechium edule HOM05D008295 ORTHO05D010471 1.0e-08 63.2 50 50.0
Carub.0003s2338 Capsella rubella HOM05D008295 ORTHO05D010471 3.1e-08 61.6 78 39.7
AT2G14935 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 1.3e-06 56.2 56 44.6
AT3G23167 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 1.3e-06 56.2 81 40.7


User provided reference genes

Program Settings