Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p62270 Brassica napus HOM05D004471 ORTHO05D005345 2.0e-109 399.1 194 100.0
A05p42590 Brassica napus HOM05D004471 ORTHO05D005345 4.6e-98 361.3 177 100.0
BcaC07g40233 Brassica carinata HOM05D004471 ORTHO05D005345 3.4e-93 345.1 169 99.4
BolC5t34882H Brassica oleracea HOM05D004471 ORTHO05D005345 5.0e-92 341.3 167 100.0
BraA05t22994Z Brassica rapa HOM05D004471 ORTHO05D005345 1.1e-91 340.1 167 99.4
Thhalv10021604m.g Eutrema salsugineum HOM05D004471 ORTHO05D005345 1.9e-91 339.3 167 99.4
AL3G15090 Arabidopsis lyrata HOM05D004471 ORTHO05D005345 4.6e-90 334.7 167 98.2
Sp3g03820 Schrenkiella parvula HOM05D004471 ORTHO05D005345 4.6e-90 334.7 167 97.6
Carub.0003s0423 Capsella rubella HOM05D004471 ORTHO05D005345 6.1e-90 334.3 167 98.2
AT3G05000 Arabidopsis thaliana HOM05D004471 ORTHO05D005345 1.0e-89 333.6 167 97.6
Aa31LG5G15450 Aethionema arabicum HOM05D004471 ORTHO05D005345 1.5e-88 329.7 168 95.2
CARHR079310 Cardamine hirsuta HOM05D004471 ORTHO05D005345 5.7e-88 327.8 168 96.4
BcaC05g29980 Brassica carinata HOM05D004471 ORTHO05D005345 1.7e-84 316.2 155 99.4
BcaC05g29981 Brassica carinata HOM05D004471 ORTHO05D005345 3.8e-84 315.1 155 98.7
THA.LOC104818664 Tarenaya hassleriana HOM05D004471 ORTHO05D005345 1.7e-79 299.7 169 88.8
THA.LOC104821699 Tarenaya hassleriana HOM05D004471 ORTHO05D005345 4.8e-79 298.1 167 86.8
Phvul.006G096500 Phaseolus vulgaris HOM05D004471 ORTHO05D005345 5.9e-77 291.2 168 82.7
Glyma.19G240000 Glycine max HOM05D004471 ORTHO05D005345 8.5e-76 287.3 170 82.9
Lj2g0025202 Lotus japonicus HOM05D004471 ORTHO05D005345 8.5e-76 287.3 170 82.9
Atru.chr2.617 Acer truncatum HOM05D004471 ORTHO05D005345 1.1e-75 287.0 167 83.8
Glyma.03G242500 Glycine max HOM05D004471 ORTHO05D005345 1.1e-75 287.0 170 82.4
MELO3C015368.2 Cucumis melo HOM05D004471 ORTHO05D005345 3.2e-75 285.4 167 82.0
EL10Ac4g09248 Beta vulgaris HOM05D004471 ORTHO05D005345 7.2e-75 284.3 169 79.9
ClCG03G016550 Citrullus lanatus HOM05D004471 ORTHO05D005345 7.2e-75 284.3 167 81.4
Potri.013G031000 Populus trichocarpa HOM05D004471 ORTHO05D005345 7.2e-75 284.3 167 82.6
TWI12G0951 Tripterygium wilfordii HOM05D004471 ORTHO05D005345 9.4e-75 283.9 169 80.5
Actinidia05746 Actinidia chinensis HOM05D004471 ORTHO05D005345 1.2e-74 283.5 169 80.5
Medtr7g114210 Medicago truncatula HOM05D004471 ORTHO05D005345 1.2e-74 283.5 170 82.4
VMungo0540G0886 Vigna mungo HOM05D004471 ORTHO05D005345 1.2e-74 283.5 170 80.6
TWI56G0886 Tripterygium wilfordii HOM05D004471 ORTHO05D005345 2.1e-74 282.7 169 80.5
Lsat_1_v5_gn_5_112921 Lactuca sativa HOM05D004471 ORTHO05D005345 4.7e-74 281.6 169 81.1
GSVIVG01021973001 Vitis vinifera HOM05D004471 ORTHO05D005345 4.7e-74 281.6 169 81.7
arahy.Tifrunner.gnm1.ann1.9WIB0A Arachis hypogaea HOM05D004471 ORTHO05D005345 1.0e-73 280.4 170 79.4
TPR.G6943 Trifolium pratense HOM05D004471 ORTHO05D005345 1.0e-73 280.4 170 81.2
Ca_09388_v3 Cicer arietinum L. HOM05D004471 ORTHO05D005345 1.4e-73 280.0 170 81.2
Sed0002921 Sechium edule HOM05D004471 ORTHO05D005345 1.4e-73 280.0 167 79.6
vmacro19660 Vaccinium macrocarpon HOM05D004471 ORTHO05D005345 1.4e-73 280.0 165 83.0
Dinv26586 Davidia involucrata HOM05D004471 ORTHO05D005345 3.0e-73 278.9 169 79.3
Nitab4.5_0002323g0100 Nicotiana tabacum HOM05D004471 ORTHO05D005345 3.0e-73 278.9 169 78.7
Nitab4.5_0007843g0010 Nicotiana tabacum HOM05D004471 ORTHO05D005345 3.0e-73 278.9 169 78.7
CiPaw.07G011400 Carya illinoinensis HOM05D004471 ORTHO05D005345 4.0e-73 278.5 170 81.2
Eucgr.B01762 Eucalyptus grandis HOM05D004471 ORTHO05D005345 5.2e-73 278.1 167 81.4
Ciclev10002639m.g Citrus clementina HOM05D004471 ORTHO05D005345 6.7e-73 277.7 179 76.5
CsaV3_1G039430 Cucumis sativus L. HOM05D004471 ORTHO05D005345 6.7e-73 277.7 172 79.1
PSO063G3713 Papaver somniferum HOM05D004471 ORTHO05D005345 8.8e-73 277.3 172 77.9
CSS0025209 Camellia sinensis var. sinensis HOM05D004471 ORTHO05D005345 1.5e-72 276.6 169 78.1
PSO170G4164 Papaver somniferum HOM05D004471 ORTHO05D005345 1.5e-72 276.6 172 77.3
PGR031G3800 Punica granatum HOM05D004471 ORTHO05D005345 1.5e-72 276.6 167 80.8
Sabra13G0030200 Salix brachista HOM05D004471 ORTHO05D005345 1.5e-72 276.6 163 82.2
Solyc04g072410.3 Solanum lycopersicum HOM05D004471 ORTHO05D005345 2.0e-72 276.2 169 78.1
Sopen04g028580 Solanum pennellii HOM05D004471 ORTHO05D005345 2.0e-72 276.2 169 78.1
PGSC0003DMG400027544 Solanum tuberosum HOM05D004471 ORTHO05D005345 2.0e-72 276.2 169 78.1
Cc02_g32300 Coffea canephora HOM05D004471 ORTHO05D005345 2.6e-72 275.8 169 78.1
CAN.G617.9 Capsicum annuum HOM05D004471 ORTHO05D005345 4.4e-72 275.0 169 77.5
Gorai.007G263500 Gossypium raimondii HOM05D004471 ORTHO05D005345 4.4e-72 275.0 168 79.8
QL03p002667 Quercus lobata HOM05D004471 ORTHO05D005345 4.4e-72 275.0 168 78.6
Rhsim05G0148100 Rhododendron simsii HOM05D004471 ORTHO05D005345 5.7e-72 274.6 165 81.8
Hund07017 Selenicereus undatus HOM05D004471 ORTHO05D005345 5.7e-72 274.6 167 78.4
Peaxi162Scf00071g00744 Petunia axillaris HOM05D004471 ORTHO05D005345 9.7e-72 273.9 169 78.1
Gohir.A11G236600 Gossypium hirsutum HOM05D004471 ORTHO05D005345 1.3e-71 273.5 168 79.2
Gohir.D11G247200 Gossypium hirsutum HOM05D004471 ORTHO05D005345 1.3e-71 273.5 168 79.2
Duzib177G1077 Durio zibethinus HOM05D004471 ORTHO05D005345 1.7e-71 273.1 168 79.8
Manes.09G160500 Manihot esculenta HOM05D004471 ORTHO05D005345 2.2e-71 272.7 169 78.1
Haze_04280 Corylus avellana HOM05D004471 ORTHO05D005345 2.8e-71 272.3 166 80.1
Sc09g0003490 Simmondsia chinensis HOM05D004471 ORTHO05D005345 2.8e-71 272.3 170 76.5
Lj9A676G54 Lonicera japonica HOM05D004471 ORTHO05D005345 4.8e-71 271.6 178 74.2
Thecc.05G251800 Theobroma cacao HOM05D004471 ORTHO05D005345 4.8e-71 271.6 168 79.2
TAR629G0585 Trochodendron aralioides HOM05D004471 ORTHO05D005345 4.8e-71 271.6 170 77.6
Lalb_Chr18g0045321 Lupinus albus HOM05D004471 ORTHO05D005345 1.1e-70 270.4 171 76.0
Ah.06g192940 Amaranthus hybridus HOM05D004471 ORTHO05D005345 1.4e-70 270.0 166 78.3
Os09g0244900 Oryza sativa ssp. japonica HOM05D004471 ORTHO05D005345 1.4e-70 270.0 170 78.8
Aqoxy5G00550 Aquilegia oxysepala HOM05D004471 ORTHO05D005345 2.4e-70 269.2 168 78.0
DCAR_003298 Daucus carota HOM05D004471 ORTHO05D005345 2.4e-70 269.2 174 76.4
AUR62005042 Chenopodium quinoa HOM05D004471 ORTHO05D005345 4.1e-70 268.5 169 75.7
AUR62000928 Chenopodium quinoa HOM05D004471 ORTHO05D005345 7.0e-70 267.7 166 77.1
Ah.04g160020 Amaranthus hybridus HOM05D003164 ORTHO05D003575 1.6e-69 266.5 166 80.1
Hund21668 Selenicereus undatus HOM05D004471 ORTHO05D005345 2.0e-69 266.2 169 75.1
Migut.I00591 Erythranthe guttata HOM05D004471 ORTHO05D005345 4.5e-69 265.0 169 73.4
Oeu053263.1 Olea europaea HOM05D004471 ORTHO05D005345 4.5e-69 265.0 168 74.4
Os07g0291100 Oryza sativa ssp. japonica HOM05D004471 ORTHO05D005345 7.7e-69 264.2 169 76.9
Duzib106G0566 Durio zibethinus HOM05D004471 ORTHO05D005345 1.3e-68 263.5 168 76.8
Gohir.D13G104100 Gossypium hirsutum HOM05D004471 ORTHO05D005345 1.7e-68 263.1 168 78.0
HanXRQChr10g0301731 Helianthus annuus HOM05D004471 ORTHO05D005345 1.7e-68 263.1 167 77.2
Potri.005G044300 Populus trichocarpa HOM05D004471 ORTHO05D005345 2.2e-68 262.7 168 78.6
Nn5g28667 Nelumbo nucifera HOM05D004471 ORTHO05D005345 2.9e-68 262.3 166 75.9
Sabra05G0041100 Salix brachista HOM05D004471 ORTHO05D005345 3.8e-68 261.9 168 76.8
FAN14G3038 Fragaria x ananassa HOM05D004471 ORTHO05D005345 6.5e-68 261.2 170 74.1
Gohir.A13G100500 Gossypium hirsutum HOM05D004471 ORTHO05D005345 6.5e-68 261.2 168 76.8
HanXRQChr14g0442561 Helianthus annuus HOM05D004471 ORTHO05D005345 6.5e-68 261.2 167 75.4
Lalb_Chr02g0148511 Lupinus albus HOM05D004471 ORTHO05D005345 6.5e-68 261.2 170 74.7
SalBow3G0010 Salvia bowleyana HOM05D004471 ORTHO05D005345 6.5e-68 261.2 165 76.4
SGA_v2.0_scaffold143G35756 Striga asiatica HOM05D004471 ORTHO05D005345 6.5e-68 261.2 169 72.8
Zm00001eb421350 Zea mays HOM05D004471 ORTHO05D005345 8.5e-68 260.8 165 75.8
FvH4_6g04260 Fragaria vesca HOM05D004471 ORTHO05D005345 1.1e-67 260.4 170 73.5
FAN02G0766 Fragaria x ananassa HOM05D004471 ORTHO05D005345 1.1e-67 260.4 170 73.5
FAN05G4093 Fragaria x ananassa HOM05D004471 ORTHO05D005345 1.1e-67 260.4 170 73.5
MSTRG.11237 Avicennia marina HOM05D004471 ORTHO05D005345 1.5e-67 260.0 169 72.8
HanXRQChr03g0072361 Helianthus annuus HOM05D004471 ORTHO05D005345 1.9e-67 259.6 167 75.4
FAN09G1403 Fragaria x ananassa HOM05D004471 ORTHO05D005345 2.5e-67 259.2 170 72.9
Oeu041531.1 Olea europaea HOM05D004471 ORTHO05D005345 3.2e-67 258.8 179 69.8
Cfa006506 Carpinus fangiana HOM05D004471 ORTHO05D005345 4.2e-67 258.5 154 81.2
Nn1g09147 Nelumbo nucifera HOM05D004471 ORTHO05D005345 5.5e-67 258.1 166 74.1
SEGI_33381 Sequoiadendron giganteum HOM05D004471 ORTHO05D005345 5.5e-67 258.1 171 70.8
Prupe.6G334800 Prunus persica HOM05D004471 ORTHO05D005345 9.4e-67 257.3 168 73.8
CSS0028112 Camellia sinensis var. sinensis HOM05D004471 ORTHO05D005345 1.2e-66 256.9 154 81.2
Lalb_Chr06g0167871 Lupinus albus HOM05D004471 ORTHO05D005345 1.2e-66 256.9 170 72.9
MBI07_g44660_MAGBIO Magnolia biondii HOM05D004471 ORTHO05D005345 1.2e-66 256.9 164 75.6
Zm00001eb084990 Zea mays HOM05D004471 ORTHO05D005345 1.6e-66 256.5 165 74.5
Manes.08G125300 Manihot esculenta HOM05D004471 ORTHO05D005345 2.7e-66 255.8 167 74.3
SGA_v2.0_scaffold40G15614 Striga asiatica HOM05D004471 ORTHO05D005345 2.7e-66 255.8 190 65.8
MD12G1229300 Malus domestica HOM05D004471 ORTHO05D005345 3.6e-66 255.4 168 72.0
CDE06G1925 Ceratophyllum demersum HOM05D004471 ORTHO05D005345 4.7e-66 255.0 171 71.3
FAN05G1097 Fragaria x ananassa HOM05D004471 ORTHO05D005345 6.1e-66 254.6 166 74.1
arahy.Tifrunner.gnm1.ann1.HP6SUR Arachis hypogaea HOM05D004471 ORTHO05D005345 8.0e-66 254.2 171 72.5
CANSAT54G1584 Cannabis sativa HOM05D004471 ORTHO05D005345 1.0e-65 253.8 169 72.8
HPP92_003010 Vanilla planifolia HOM05D004471 ORTHO05D005345 1.4e-65 253.4 167 71.3
FAN09G1313 Fragaria x ananassa HOM05D004471 ORTHO05D005345 1.8e-65 253.1 166 73.5
MD00G1052700 Malus domestica HOM05D004471 ORTHO05D005345 1.8e-65 253.1 168 71.4
arahy.Tifrunner.gnm1.ann1.M2LFCZ Arachis hypogaea HOM05D004471 ORTHO05D005345 3.0e-65 252.3 170 72.4
arahy.Tifrunner.gnm1.ann1.NV1QRL Arachis hypogaea HOM05D004471 ORTHO05D005345 3.0e-65 252.3 171 72.5
Cfa006508 Carpinus fangiana HOM05D004471 ORTHO05D005345 8.8e-65 250.8 155 78.7
HPP92_027546 Vanilla planifolia HOM05D004471 ORTHO05D005345 8.8e-65 250.8 165 71.5
COL.COLO4_36062 Corchorus olitorius HOM05D004471 ORTHO05D005345 1.5e-64 250.0 220 60.9
arahy.Tifrunner.gnm1.ann1.MZ802S Arachis hypogaea HOM05D004471 ORTHO05D005345 5.7e-64 248.1 167 73.1
RcHm_v2.0_Chr3g0452951 Rosa chinensis HOM05D004471 ORTHO05D005345 3.7e-63 245.4 170 70.0
ECA240G0709 Erigeron canadensis HOM05D005412 ORTHO05D006096 2.4e-62 242.7 158 74.1
ATR0724G032 Amborella trichopoda HOM05D004471 ORTHO05D005345 9.1e-62 240.7 167 68.3
unitig_744.g24459 Utricularia gibba HOM05D004471 ORTHO05D005345 1.2e-61 240.4 169 66.3
SMO347G0444 Selaginella moellendorffii HOM05D004471 ORTHO05D005345 2.7e-61 239.2 170 67.1
Pp3c4_10030 Physcomitrium patens HOM05D004471 ORTHO05D005345 5.9e-61 238.0 166 66.3
Mapoly0002s0104 Marchantia polymorpha HOM05D004471 ORTHO05D005345 1.0e-60 237.3 173 66.5
SHI18238 Sapria himalayana HOM05D004471 ORTHO05D005345 3.8e-60 235.3 169 69.2
AL3G15360 Arabidopsis lyrata HOM05D004471 ORTHO05D005345 8.5e-60 234.2 114 98.2
MD12G1230100 Malus domestica HOM05D004471 ORTHO05D005345 3.2e-59 232.3 152 71.7
DCAR_030062 Daucus carota HOM05D004471 ORTHO05D005345 3.4e-56 222.2 166 65.1
DCAR_022266 Daucus carota HOM05D004471 ORTHO05D005345 4.4e-56 221.9 165 65.5
Cpa.g.sc117.10 Carica papaya HOM05D004471 ORTHO05D005345 2.9e-52 209.1 113 85.0
Psat3g008960 Pisum sativum HOM05D004471 ORTHO05D005345 1.5e-48 196.8 117 82.1
Lsat_1_v5_gn_9_110141 Lactuca sativa HOM05D004471 ORTHO05D005345 2.6e-48 196.1 145 69.7
Cc00_g16770 Coffea canephora HOM05D004471 ORTHO05D005345 7.5e-48 194.5 116 78.4
Cc00_g29480 Coffea canephora HOM05D004471 ORTHO05D005345 7.5e-48 194.5 116 78.4
Eucgr.L02626 Eucalyptus grandis HOM05D004471 ORTHO05D005345 1.3e-47 193.7 114 81.6
Aa31LG1G24890 Aethionema arabicum HOM05D004471 ORTHO05D005345 6.4e-47 191.4 96 92.7
CBR_g38080 Chara braunii HOM05D004471 ORTHO05D005345 6.4e-47 191.4 185 51.4
Aa31LG1G21870 Aethionema arabicum HOM05D004471 ORTHO05D005345 2.4e-46 189.5 125 75.2
Aa31LG1G26450 Aethionema arabicum HOM05D004471 ORTHO05D005345 1.2e-45 187.2 100 88.0
Gorai.013G116700 Gossypium raimondii HOM05D004471 ORTHO05D005345 1.5e-43 180.3 114 78.9
Cre16.g663650 Chlamydomonas reinhardtii HOM05D004471 ORTHO05D005345 7.5e-40 167.9 167 48.5
CSS0014300 Camellia sinensis var. sinensis HOM05D002365 ORTHO05D005345 1.9e-35 153.3 164 50.6
QL03p002083 Quercus lobata HOM05D004471 ORTHO05D005345 2.7e-29 132.9 95 70.5
Aa31LG1G25270 Aethionema arabicum HOM05D004471 ORTHO05D005345 1.7e-28 130.2 115 60.9
arahy.Tifrunner.gnm1.ann1.BCR285 Arachis hypogaea HOM05D004471 ORTHO05D005345 1.2e-24 117.5 60 86.7
MCO16G564 Micromonas commoda HOM05D004471 ORTHO05D005345 4.1e-22 109.0 157 38.9
RcHm_v2.0_Chr5g0055691 Rosa chinensis HOM05D004471 ORTHO05D005345 4.1e-22 109.0 113 52.2
Pp3c13_13330 Physcomitrium patens HOM05D004471 ORTHO05D005345 5.4e-22 108.6 115 48.7
Cfa024495 Carpinus fangiana HOM05D004471 ORTHO05D005345 5.1e-20 102.1 128 41.4
PRCOL_00002528 Prasinoderma coloniale HOM05D004471 ORTHO05D005345 3.6e-18 95.9 181 34.8
CBR_g12958 Chara braunii HOM05D000019 ORTHO05D000002 4.0e-17 92.4 91 50.5
Dinv27603 Davidia involucrata HOM05D004471 ORTHO05D005345 4.9e-15 85.5 54 75.9
FAN05G5407 Fragaria x ananassa HOM05D012224 ORTHO05D017959 1.2e-13 80.9 48 79.2
Dinv27604 Davidia involucrata HOM05D004471 ORTHO05D005345 4.6e-13 79.0 52 75.0
FAN02G2374 Fragaria x ananassa HOM05D012224 ORTHO05D017959 3.3e-11 72.8 50 72.0
QL03p002537 Quercus lobata HOM05D004471 ORTHO05D005345 1.8e-09 67.0 67 50.7


User provided reference genes

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