Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p61750 Brassica napus HOM05D005965 ORTHO05D007283 1.3e-252 875.9 441 100.0
BcaC05g30118 Brassica carinata HOM05D005965 ORTHO05D007283 3.5e-242 841.3 441 97.1
BolC5t34833H Brassica oleracea HOM05D005965 ORTHO05D007283 1.9e-240 835.5 457 93.9
BcaC05g30164 Brassica carinata HOM05D005965 ORTHO05D007283 2.4e-235 818.5 466 90.3
Thhalv10020753m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 2.3e-233 812.0 441 93.9
Sp3g04310 Schrenkiella parvula HOM05D005965 ORTHO05D007283 1.6e-226 789.3 441 91.2
Carub.0003s0477 Capsella rubella HOM05D005965 ORTHO05D007283 1.6e-218 762.7 441 87.3
AL3G16080 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 7.8e-218 760.4 442 86.7
AT3G05480 Arabidopsis thaliana HOM05D005965 ORTHO05D007283 1.5e-216 756.1 443 86.9
Aa31LG5G15920 Aethionema arabicum HOM05D005965 ORTHO05D007283 1.1e-190 670.2 498 72.3
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 2.2e-188 662.5 451 76.3
BraA05t23035Z Brassica rapa HOM05D005965 ORTHO05D007283 4.9e-188 661.4 353 94.1
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 5.7e-160 568.2 445 65.4
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 4.8e-159 565.1 452 65.5
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 6.9e-158 561.2 448 64.7
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 1.2e-157 560.5 452 65.5
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 7.7e-157 557.8 455 64.6
Potri.013G017500 Populus trichocarpa HOM05D005965 ORTHO05D007283 1.3e-156 557.0 454 63.7
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 1.7e-156 556.6 458 64.6
Sabra13G0020500 Salix brachista HOM05D005965 ORTHO05D007283 2.9e-156 555.8 430 66.0
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 5.0e-156 555.1 450 64.4
Sabra13G0016500 Salix brachista HOM05D005965 ORTHO05D007283 6.5e-156 554.7 457 63.7
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 8.5e-156 554.3 453 64.2
Cfa006624 Carpinus fangiana HOM05D005965 ORTHO05D007283 1.4e-155 553.5 456 64.9
Atru.chr2.26 Acer truncatum HOM05D005965 ORTHO05D007283 1.9e-155 553.1 453 65.8
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 2.1e-154 549.7 487 59.5
Cpa.g.sc48.91 Carica papaya HOM05D005965 ORTHO05D007283 3.6e-154 548.9 453 66.0
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 1.1e-152 543.9 449 61.9
QL03p021207 Quercus lobata HOM05D005965 ORTHO05D007283 1.5e-152 543.5 455 62.6
TAR362G0609 Trochodendron aralioides HOM05D005965 ORTHO05D007283 3.3e-152 542.3 449 63.0
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 1.8e-150 536.6 451 63.9
Lj1g0019406 Lotus japonicus HOM05D005965 ORTHO05D007283 7.0e-150 534.6 452 63.3
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea HOM05D005965 ORTHO05D007283 5.9e-149 531.6 433 64.4
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 1.7e-148 530.0 452 61.1
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 6.5e-148 528.1 451 61.0
Sed0024378 Sechium edule HOM05D005965 ORTHO05D007283 6.5e-148 528.1 456 61.4
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 1.1e-147 527.3 450 62.4
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea HOM05D005965 ORTHO05D007283 1.4e-147 526.9 433 64.2
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 4.2e-147 525.4 454 62.1
CsaV3_2G006620 Cucumis sativus L. HOM05D005965 ORTHO05D007283 7.2e-147 524.6 455 61.1
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 7.2e-147 524.6 452 61.9
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 4.7e-146 521.9 468 59.2
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 1.0e-145 520.8 449 60.8
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 1.4e-145 520.4 452 63.3
Dinv40342 Davidia involucrata HOM05D005965 ORTHO05D007283 3.0e-145 519.2 338 74.0
ClCG02G015450 Citrullus lanatus HOM05D005965 ORTHO05D007283 1.1e-144 517.3 453 61.1
COL.COLO4_10514 Corchorus olitorius HOM05D005965 ORTHO05D007283 1.1e-144 517.3 409 66.3
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 2.0e-144 516.5 454 61.5
Eucgr.H04531 Eucalyptus grandis HOM05D005965 ORTHO05D007283 3.3e-144 515.8 452 60.2
TPR.G33209 Trifolium pratense HOM05D005965 ORTHO05D007283 5.7e-144 515.0 453 60.7
VMungo0540G0496 Vigna mungo HOM05D005965 ORTHO05D007283 8.2e-143 511.1 453 59.8
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 1.1e-142 510.8 448 61.4
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 1.4e-142 510.4 449 61.2
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 1.8e-142 510.0 451 59.9
Lalb_Chr18g0045721 Lupinus albus HOM05D005965 ORTHO05D007283 1.8e-142 510.0 452 61.1
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 1.8e-142 510.0 477 58.5
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 1.8e-142 510.0 450 60.7
Glyma.03G236100 Glycine max HOM05D005965 ORTHO05D007283 4.1e-142 508.8 455 60.4
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 1.6e-141 506.9 339 71.7
PGR031G2641 Punica granatum HOM05D005965 ORTHO05D007283 4.5e-141 505.4 448 59.2
Glyma.19G233800 Glycine max HOM05D005965 ORTHO05D007283 1.7e-140 503.4 455 59.8
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 5.0e-140 501.9 455 60.7
CARHR079860 Cardamine hirsuta HOM05D005965 ORTHO05D007283 1.1e-139 500.7 255 95.7
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 1.9e-139 500.0 456 60.3
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 9.4e-139 497.7 454 59.0
Hund07094 Selenicereus undatus HOM05D005965 ORTHO05D007283 1.4e-137 493.8 457 58.6
FvH4_6g06510 Fragaria vesca HOM05D005965 ORTHO05D007283 6.8e-137 491.5 389 65.6
FAN05G3147 Fragaria x ananassa HOM05D005965 ORTHO05D007283 2.6e-136 489.6 389 65.6
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 2.6e-136 489.6 413 61.0
Phvul.006G090000 Phaseolus vulgaris HOM05D005965 ORTHO05D007283 5.7e-136 488.4 456 57.7
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 7.5e-136 488.0 442 57.5
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 9.7e-136 487.6 442 57.5
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 1.7e-135 486.9 442 57.2
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 2.8e-135 486.1 449 59.0
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 1.1e-134 484.2 454 56.4
Lj9A144T46 Lonicera japonica HOM05D005965 ORTHO05D007283 3.1e-134 482.6 338 69.2
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 7.0e-134 481.5 445 56.6
MBI19_g29225_MAGBIO Magnolia biondii HOM05D005965 ORTHO05D007283 1.2e-133 480.7 457 57.8
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 2.7e-133 479.6 443 57.1
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 2.7e-133 479.6 458 56.8
Ca_05803_v3 Cicer arietinum L. HOM05D005965 ORTHO05D007283 1.0e-132 477.6 407 61.9
HanXRQChr03g0072671 Helianthus annuus HOM05D005965 ORTHO05D007283 2.9e-132 476.1 452 56.6
Ah.04g161100 Amaranthus hybridus HOM05D005965 ORTHO05D007283 6.5e-132 474.9 452 58.0
Eucgr.H04558 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.2e-130 470.7 392 61.0
AUR62000770 Chenopodium quinoa HOM05D005965 ORTHO05D007283 3.6e-130 469.2 401 62.1
Migut.G01092 Erythranthe guttata HOM05D005965 ORTHO05D007283 5.2e-129 465.3 339 66.1
HanXRQChr03g0072661 Helianthus annuus HOM05D005965 ORTHO05D007283 2.0e-128 463.4 472 54.0
Lsat_1_v5_gn_9_124801 Lactuca sativa HOM05D005965 ORTHO05D007283 2.0e-128 463.4 462 56.1
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 1.7e-124 450.3 337 67.1
HPP92_000400 Vanilla planifolia HOM05D005965 ORTHO05D007283 3.8e-124 449.1 458 54.1
HPP92_000403 Vanilla planifolia HOM05D005965 ORTHO05D007283 3.3e-123 446.0 458 53.7
BraA05t19070Z Brassica rapa HOM05D005965 ORTHO05D007283 1.6e-122 443.7 245 91.0
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 2.3e-121 439.9 467 51.4
ATR0796G244 Amborella trichopoda HOM05D005965 ORTHO05D007283 7.5e-120 434.9 456 51.1
Thecc.05G312500 Theobroma cacao HOM05D005965 ORTHO05D007283 4.5e-117 425.6 372 61.8
SHI18108 Sapria himalayana HOM05D005965 ORTHO05D007283 2.3e-116 423.3 295 70.5
AUR62005199 Chenopodium quinoa HOM05D005965 ORTHO05D007283 1.6e-114 417.2 394 57.4
Migut.G01320 Erythranthe guttata HOM05D005965 ORTHO05D007283 8.9e-113 411.4 340 60.6
Haze_04145 Corylus avellana HOM05D005965 ORTHO05D007283 7.5e-112 408.3 255 74.9
SEGI_33282 Sequoiadendron giganteum HOM05D005965 ORTHO05D007283 9.2e-110 401.4 474 47.9
MELO3C031536.2 Cucumis melo HOM05D005965 ORTHO05D007283 2.5e-107 393.3 400 54.5
Eucgr.H04576 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.3e-105 386.7 253 70.4
Os03g0345100 Oryza sativa ssp. japonica HOM05D005965 ORTHO05D007283 2.8e-98 363.2 453 47.9
CDE02G1352 Ceratophyllum demersum HOM05D005965 ORTHO05D007283 1.1e-97 361.3 367 53.7
Eucgr.H04573 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.7e-95 354.0 275 62.2
Pp3c7_570 Physcomitrium patens HOM05D005965 ORTHO05D007283 3.2e-94 349.7 388 46.4
Pp3c15_2650 Physcomitrium patens HOM05D005965 ORTHO05D007283 3.5e-93 346.3 369 49.1
SMO134G0282 Selaginella moellendorffii HOM05D005965 ORTHO05D007283 1.9e-91 340.5 343 50.7
Eucgr.H04556 Eucalyptus grandis HOM05D005965 ORTHO05D007283 9.6e-91 338.2 289 59.2
Mapoly0078s0014 Marchantia polymorpha HOM05D005965 ORTHO05D007283 1.2e-90 337.8 420 43.8
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.2e-85 321.2 351 51.3
SHI32441 Sapria himalayana HOM05D005965 ORTHO05D007283 1.6e-85 320.9 292 58.6
CBR_g180 Chara braunii HOM05D005965 ORTHO05D007283 1.5e-80 304.3 468 42.7
Zm00001eb016590 Zea mays HOM05D005965 ORTHO05D007283 2.9e-79 300.1 319 50.8
CARHR079870 Cardamine hirsuta HOM05D005965 ORTHO05D007283 1.3e-71 274.6 187 78.6
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 3.9e-68 263.1 298 51.0
Eucgr.H04569 Eucalyptus grandis HOM05D005965 ORTHO05D007283 6.2e-66 255.8 452 39.6
Eucgr.H04571 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.9e-62 244.2 439 38.5
Thhalv10022144m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 6.7e-52 209.1 351 41.9
Thecc.07G184800 Theobroma cacao HOM05D005965 ORTHO05D007283 5.7e-51 206.1 234 50.4
Psat6g098120 Pisum sativum HOM05D005965 ORTHO05D007283 2.2e-50 204.1 164 62.2
MCO01G074 Micromonas commoda HOM05D005965 ORTHO05D007283 9.1e-33 145.6 336 30.4
Thecc.07G184700 Theobroma cacao HOM05D005965 ORTHO05D007283 1.7e-31 141.4 193 50.3
QL03p021253 Quercus lobata HOM05D005965 ORTHO05D007283 5.0e-31 139.8 93 68.8
PSO017G4250 Papaver somniferum HOM05D005965 ORTHO05D007283 4.0e-28 130.2 122 53.3
TAR633G2454 Trochodendron aralioides HOM05D005965 ORTHO05D007283 1.1e-27 128.6 134 52.2
Eucgr.H04575 Eucalyptus grandis HOM05D005965 ORTHO05D007283 8.5e-23 112.5 125 46.4
Cre16.g682950 Chlamydomonas reinhardtii HOM05D005965 ORTHO05D007283 1.1e-22 112.1 201 34.8
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 1.9e-22 111.3 60 76.7
Haze_04144 Corylus avellana HOM05D005965 ORTHO05D007283 3.2e-22 110.5 139 54.0
TWI56G1489 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 2.9e-15 87.4 73 60.3
Nitab4.5_0000524g0030 Nicotiana tabacum HOM05D005965 ORTHO05D007283 2.2e-10 71.2 209 34.0
C03p41530 Brassica napus HOM05D033945 ORTHO05D033616 7.7e-08 62.8 47 68.1
BolC3t16434H Brassica oleracea HOM05D033945 ORTHO05D033616 7.7e-08 62.8 47 68.1


User provided reference genes

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