Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p61280 Brassica napus HOM05D005221 ORTHO05D006355 2.4e-104 382.5 237 100.0
BolC5t34787H Brassica oleracea HOM05D005221 ORTHO05D006355 2.4e-104 382.5 237 100.0
BcaC05g30072 Brassica carinata HOM05D005221 ORTHO05D006355 5.8e-103 377.9 237 97.5
A05p42050 Brassica napus HOM05D005221 ORTHO05D006355 2.0e-95 352.8 237 93.7
BraA05t22925Z Brassica rapa HOM05D005221 ORTHO05D006355 1.1e-93 347.1 241 92.1
Carub.0003s0539 Capsella rubella HOM05D005221 ORTHO05D006355 5.1e-83 311.6 247 81.4
BraA01t04457Z Brassica rapa HOM05D005221 ORTHO05D006355 1.7e-81 306.6 242 80.2
AL3G16790 Arabidopsis lyrata HOM05D005221 ORTHO05D006355 2.8e-81 305.8 251 80.9
AT3G05980 Arabidopsis thaliana HOM05D005221 ORTHO05D006355 2.2e-78 296.2 249 79.1
Thhalv10021379m.g Eutrema salsugineum HOM05D005221 ORTHO05D006355 1.1e-77 293.9 253 79.4
Sp3g04920 Schrenkiella parvula HOM05D005221 ORTHO05D006355 7.2e-77 291.2 252 79.8
CARHR080490 Cardamine hirsuta HOM05D005221 ORTHO05D006355 6.1e-76 288.1 252 79.4
BcaC09g47869 Brassica carinata HOM05D005221 ORTHO05D006355 9.7e-66 254.2 235 69.8
Aa31LG5G16450 Aethionema arabicum HOM05D005221 ORTHO05D006355 1.7e-65 253.4 242 71.5
BolC1t05645H Brassica oleracea HOM05D005221 ORTHO05D006355 4.8e-65 251.9 236 68.2
THA.LOC104802759 Tarenaya hassleriana HOM05D005221 ORTHO05D006355 4.2e-53 212.2 232 62.5
THA.LOC104818779 Tarenaya hassleriana HOM05D005221 ORTHO05D006355 1.6e-52 210.3 238 66.4
BraA03t10262Z Brassica rapa HOM05D005221 ORTHO05D006355 4.1e-48 195.7 243 56.8
BolC3t13571H Brassica oleracea HOM05D005221 ORTHO05D006355 9.2e-48 194.5 240 57.9
CSS0023930 Camellia sinensis var. sinensis HOM05D005221 ORTHO05D006355 7.8e-47 191.4 226 54.0
Thhalv10016073m.g Eutrema salsugineum HOM05D005221 ORTHO05D006355 7.8e-47 191.4 249 56.6
C03p11020 Brassica napus HOM05D005221 ORTHO05D006355 8.6e-46 188.0 240 58.3
Thecc.04G227300 Theobroma cacao HOM05D005221 ORTHO05D006355 1.1e-45 187.6 239 59.0
BolC9t58548H Brassica oleracea HOM05D005221 ORTHO05D006355 1.5e-45 187.2 245 56.7
AT5G19340 Arabidopsis thaliana HOM05D005221 ORTHO05D006355 7.3e-45 184.9 266 53.0
Duzib151G0158 Durio zibethinus HOM05D005221 ORTHO05D006355 1.2e-44 184.1 247 51.4
A03p09440 Brassica napus HOM05D005221 ORTHO05D006355 1.6e-44 183.7 244 55.3
Nn4g26263 Nelumbo nucifera HOM05D005221 ORTHO05D006355 2.1e-44 183.3 237 50.6
Carub.0006s1768 Capsella rubella HOM05D005221 ORTHO05D006355 2.8e-44 183.0 254 53.9
BcaB01g05141 Brassica carinata HOM05D005221 ORTHO05D006355 3.6e-44 182.6 254 55.1
A10p20340 Brassica napus HOM05D005221 ORTHO05D006355 3.6e-44 182.6 249 56.2
BraA10t44105Z Brassica rapa HOM05D005221 ORTHO05D006355 3.6e-44 182.6 249 56.2
Duzib212G0790 Durio zibethinus HOM05D005221 ORTHO05D006355 1.4e-43 180.6 244 51.2
QL06p003360 Quercus lobata HOM05D005221 ORTHO05D006355 1.4e-43 180.6 233 52.8
Cpa.g.sc8.322 Carica papaya HOM05D005221 ORTHO05D006355 1.8e-43 180.3 230 53.5
BcaC04g18576 Brassica carinata HOM05D005221 ORTHO05D006355 3.1e-43 179.5 255 54.1
C09p56940 Brassica napus HOM05D005221 ORTHO05D006355 3.1e-43 179.5 255 54.1
Oeu037551.1 Olea europaea HOM05D005221 ORTHO05D006355 3.1e-43 179.5 227 50.7
Manes.03G181200 Manihot esculenta HOM05D005221 ORTHO05D006355 6.8e-43 178.3 228 52.6
FvH4_4g15060 Fragaria vesca HOM05D005221 ORTHO05D006355 2.0e-42 176.8 236 50.0
FAN12G4146 Fragaria x ananassa HOM05D005221 ORTHO05D006355 2.6e-42 176.4 225 51.1
Cfa015617 Carpinus fangiana HOM05D005221 ORTHO05D006355 3.4e-42 176.0 227 59.0
FAN22G0945 Fragaria x ananassa HOM05D005221 ORTHO05D006355 3.4e-42 176.0 245 48.6
AL6G30830 Arabidopsis lyrata HOM05D005221 ORTHO05D006355 4.4e-42 175.6 250 53.2
Gohir.A09G214300 Gossypium hirsutum HOM05D005221 ORTHO05D006355 4.4e-42 175.6 234 62.4
TWI53G0458 Tripterygium wilfordii HOM05D005221 ORTHO05D006355 4.4e-42 175.6 234 51.3
FAN07G2107 Fragaria x ananassa HOM05D005221 ORTHO05D006355 5.8e-42 175.3 234 50.0
Potri.010G090700 Populus trichocarpa HOM05D005221 ORTHO05D006355 5.8e-42 175.3 240 53.3
ECA234G2268 Erigeron canadensis HOM05D005221 ORTHO05D006355 7.5e-42 174.9 232 53.9
RcHm_v2.0_Chr4g0416801 Rosa chinensis HOM05D005221 ORTHO05D006355 7.5e-42 174.9 232 50.0
Gorai.006G237300 Gossypium raimondii HOM05D005221 ORTHO05D006355 3.7e-41 172.6 233 62.2
BcaB01g04866 Brassica carinata HOM05D005221 ORTHO05D006355 4.9e-41 172.2 247 52.2
TWI09G0254 Tripterygium wilfordii HOM05D005221 ORTHO05D006355 8.3e-41 171.4 225 51.1
Cc03_g03470 Coffea canephora HOM05D005221 ORTHO05D006355 1.1e-40 171.0 232 49.1
Gohir.D09G216800 Gossypium hirsutum HOM05D005221 ORTHO05D006355 1.1e-40 171.0 233 61.8
Potri.008G150300 Populus trichocarpa HOM05D005221 ORTHO05D006355 1.1e-40 171.0 227 53.7
Nitab4.5_0000260g0100 Nicotiana tabacum HOM05D005221 ORTHO05D006355 1.9e-40 170.2 243 50.6
MD16G1188800 Malus domestica HOM05D005221 ORTHO05D006355 2.4e-40 169.9 231 51.9
Duzib052G0196 Durio zibethinus HOM05D005221 ORTHO05D006355 3.2e-40 169.5 253 45.8
Nitab4.5_0001545g0020 Nicotiana tabacum HOM05D005221 ORTHO05D006355 5.4e-40 168.7 247 49.8
MELO3C014491.2 Cucumis melo HOM05D005221 ORTHO05D006355 1.2e-39 167.5 240 56.2
Sp6g25070 Schrenkiella parvula HOM05D005221 ORTHO05D006355 1.2e-39 167.5 246 53.3
CAN.G873.5 Capsicum annuum HOM05D005221 ORTHO05D006355 1.6e-39 167.2 236 49.6
COL.COLO4_06196 Corchorus olitorius HOM05D005221 ORTHO05D006355 1.6e-39 167.2 261 49.4
Peaxi162Scf00437g00052 Petunia axillaris HOM05D005221 ORTHO05D006355 1.6e-39 167.2 246 45.9
CARHR193620 Cardamine hirsuta HOM05D005221 ORTHO05D006355 2.7e-39 166.4 247 53.0
Nn1g02242 Nelumbo nucifera HOM05D005221 ORTHO05D006355 3.5e-39 166.0 237 48.1
CsaV3_6G038280 Cucumis sativus L. HOM05D005221 ORTHO05D006355 4.6e-39 165.6 240 60.0
Manes.15G026700 Manihot esculenta HOM05D005221 ORTHO05D006355 4.6e-39 165.6 236 48.3
Solyc06g054280.1 Solanum lycopersicum HOM05D005221 ORTHO05D006355 4.6e-39 165.6 237 48.5
CiPaw.02G095300 Carya illinoinensis HOM05D005221 ORTHO05D006355 7.8e-39 164.9 231 48.9
Sopen06g019400 Solanum pennellii HOM05D005221 ORTHO05D006355 7.8e-39 164.9 237 48.9
Sabra08G0114400 Salix brachista HOM05D005221 ORTHO05D006355 1.0e-38 164.5 227 52.0
Sabra10G0052800 Salix brachista HOM05D005221 ORTHO05D006355 1.0e-38 164.5 242 48.3
PGSC0003DMG400011822 Solanum tuberosum HOM05D005221 ORTHO05D006355 1.0e-38 164.5 237 48.5
TAR362G0899 Trochodendron aralioides HOM05D005221 ORTHO05D006355 1.0e-38 164.5 227 49.8
Aqoxy2G03348 Aquilegia oxysepala HOM05D005221 ORTHO05D006355 1.3e-38 164.1 231 48.1
ClCG06G006000 Citrullus lanatus HOM05D005221 ORTHO05D006355 1.7e-38 163.7 236 56.4
Sed0008919 Sechium edule HOM05D005221 ORTHO05D006355 1.7e-38 163.7 246 48.0
Prupe.1G155500 Prunus persica HOM05D005221 ORTHO05D006355 2.3e-38 163.3 245 50.6
Sed0012211 Sechium edule HOM05D005221 ORTHO05D006355 3.0e-38 162.9 255 46.3
Solyc09g075740.1 Solanum lycopersicum HOM05D005221 ORTHO05D006355 3.9e-38 162.5 244 51.2
MSTRG.21844 Avicennia marina HOM05D005221 ORTHO05D006355 5.0e-38 162.2 245 46.9
Lj3P740T18 Lonicera japonica HOM05D005221 ORTHO05D006355 8.6e-38 161.4 229 58.5
Rhsim04G0205100 Rhododendron simsii HOM05D005221 ORTHO05D006355 1.1e-37 161.0 231 46.8
Lj5g0028012 Lotus japonicus HOM05D005221 ORTHO05D006355 1.9e-37 160.2 221 50.7
MD13G1188400 Malus domestica HOM05D005221 ORTHO05D006355 4.3e-37 159.1 231 46.3
Ca_10924_v3 Cicer arietinum L. HOM05D005221 ORTHO05D006355 5.6e-37 158.7 237 48.5
Peaxi162Scf00642g00022 Petunia axillaris HOM05D005221 ORTHO05D006355 7.3e-37 158.3 245 47.3
Actinidia23488 Actinidia chinensis HOM05D005221 ORTHO05D006355 9.5e-37 157.9 229 45.0
Nitab4.5_0000321g0080 Nicotiana tabacum HOM05D005221 ORTHO05D006355 9.5e-37 157.9 236 51.7
Glyma.20G143700 Glycine max HOM05D005221 ORTHO05D006355 1.2e-36 157.5 242 55.0
VMungo0720G0147 Vigna mungo HOM05D005221 ORTHO05D006355 1.2e-36 157.5 236 56.8
Sopen09g030550 Solanum pennellii HOM05D005221 ORTHO05D006355 3.6e-36 156.0 245 47.8
CAN.G668.8 Capsicum annuum HOM05D005221 ORTHO05D006355 8.0e-36 154.8 249 42.2
Phvul.007G054700 Phaseolus vulgaris HOM05D005221 ORTHO05D006355 8.0e-36 154.8 237 57.4
HanXRQChr10g0296561 Helianthus annuus HOM05D005221 ORTHO05D006355 1.4e-35 154.1 234 48.7
Glyma.10G249900 Glycine max HOM05D005221 ORTHO05D006355 3.1e-35 152.9 242 52.5
EL10As3g23360 Beta vulgaris HOM05D005221 ORTHO05D006355 4.0e-35 152.5 258 45.3
PGSC0003DMG400031851 Solanum tuberosum HOM05D005221 ORTHO05D006355 4.0e-35 152.5 244 45.9
Lsat_1_v5_gn_5_148500 Lactuca sativa HOM05D005221 ORTHO05D006355 5.2e-35 152.1 225 52.9
CiPaw.01G163700 Carya illinoinensis HOM05D005221 ORTHO05D006355 6.8e-35 151.8 206 50.5
Ciclev10005615m.g Citrus clementina HOM05D005221 ORTHO05D006355 6.8e-35 151.8 249 46.2
TPR.G5529 Trifolium pratense HOM05D005221 ORTHO05D006355 6.8e-35 151.8 228 46.9
BcaB08g36581 Brassica carinata HOM05D005221 ORTHO05D006355 8.9e-35 151.4 243 52.3
Eucgr.B01092 Eucalyptus grandis HOM05D005221 ORTHO05D006355 1.5e-34 150.6 271 42.1
HanXRQChr04g0110301 Helianthus annuus HOM05D005221 ORTHO05D006355 2.0e-34 150.2 219 53.9
Medtr1g104840 Medicago truncatula HOM05D005221 ORTHO05D006355 4.4e-34 149.1 225 48.4
Lalb_Chr06g0160581 Lupinus albus HOM05D005221 ORTHO05D006355 5.8e-34 148.7 231 55.8
Sc13g0004240 Simmondsia chinensis HOM05D005221 ORTHO05D006355 5.8e-34 148.7 249 47.0
TAR636G2071 Trochodendron aralioides HOM05D002203 ORTHO05D002647 2.9e-33 146.4 144 55.6
FAN17G2349 Fragaria x ananassa HOM05D005221 ORTHO05D006355 3.7e-33 146.0 223 43.5
Sc19g0004310 Simmondsia chinensis HOM05D005221 ORTHO05D006355 3.7e-33 146.0 235 45.1
Hma1.2p1_0511F.1_g168910 Hydrangea macrophylla HOM05D005221 ORTHO05D006355 4.9e-33 145.6 221 57.5
DCAR_030618 Daucus carota HOM05D005221 ORTHO05D006355 6.4e-33 145.2 241 46.9
MBI17_g31753_MAGBIO Magnolia biondii HOM05D005221 ORTHO05D006355 8.3e-33 144.8 213 41.8
Dinv38425 Davidia involucrata HOM05D005221 ORTHO05D006355 2.4e-32 143.3 175 57.1
SGA_v2.0_scaffold10G05107 Striga asiatica HOM05D005221 ORTHO05D006355 7.1e-32 141.7 230 53.5
CANSAT78G1299 Cannabis sativa HOM05D005221 ORTHO05D006355 2.1e-31 140.2 270 41.9
Migut.N00171 Erythranthe guttata HOM05D005221 ORTHO05D006355 3.5e-31 139.4 241 39.8
PGR142G0441 Punica granatum HOM05D005221 ORTHO05D006355 1.0e-30 137.9 284 46.8
Aqoxy5G00503 Aquilegia oxysepala HOM05D005221 ORTHO05D006355 6.6e-30 135.2 247 47.4
Nitab4.5_0007609g0020 Nicotiana tabacum HOM05D005221 ORTHO05D006355 6.6e-30 135.2 150 51.3
BcaNung07026 Brassica carinata HOM05D005221 ORTHO05D006355 8.6e-30 134.8 161 51.6
DCAR_002395 Daucus carota HOM05D005221 ORTHO05D006355 8.6e-30 134.8 226 46.5
Oeu029026.1 Olea europaea HOM05D005221 ORTHO05D006355 2.1e-28 130.2 173 45.7
PGR004G1499 Punica granatum HOM05D005221 ORTHO05D006355 2.8e-28 129.8 264 37.1
DCAR_024599 Daucus carota HOM05D005221 ORTHO05D006355 6.2e-28 128.6 224 41.5
Ah.04g154490 Amaranthus hybridus HOM05D005221 ORTHO05D006355 7.1e-24 115.2 182 54.9
Hma1.2p1_0995F.1_g245620 Hydrangea macrophylla HOM05D005221 ORTHO05D006355 1.6e-23 114.0 153 43.8
MSTRG.4014 Avicennia marina HOM05D005221 ORTHO05D006355 7.8e-23 111.7 225 38.7
Lj6P597T84 Lonicera japonica HOM05D005221 ORTHO05D006355 6.6e-22 108.6 173 48.6
PSO302G0248 Papaver somniferum HOM05D005221 ORTHO05D006355 7.6e-18 95.1 144 46.5
AUR62038640 Chenopodium quinoa HOM05D005221 ORTHO05D006355 1.4e-16 90.9 156 40.4
Atru.chr4.2515 Acer truncatum HOM05D005221 ORTHO05D006355 1.9e-16 90.5 231 36.8
SGA_v2.0_scaffold237G43792 Striga asiatica HOM05D005221 ORTHO05D006355 1.3e-14 84.3 216 31.9
Nn5g28878 Nelumbo nucifera HOM05D005221 ORTHO05D006355 1.7e-14 84.0 101 50.5
Nn3g20708 Nelumbo nucifera HOM05D005221 ORTHO05D006355 1.5e-13 80.9 89 51.7
Psat6g208720 Pisum sativum HOM05D005221 ORTHO05D006355 4.8e-12 75.9 49 65.3
ATR0626G396 Amborella trichopoda HOM05D005221 ORTHO05D006355 6.9e-11 72.0 137 38.0
AUR62038093 Chenopodium quinoa HOM05D005221 ORTHO05D006355 4.4e-10 69.3 150 36.7
arahy.Tifrunner.gnm1.ann1.0RM5BV Arachis hypogaea HOM05D005221 ORTHO05D006355 1.3e-09 67.8 238 40.3
SGA_v2.0_scaffold39G15291 Striga asiatica HOM05D005221 ORTHO05D006355 6.4e-09 65.5 119 37.0
MBI18_g28204_MAGBIO Magnolia biondii HOM05D003370 ORTHO05D003848 6.0e-07 58.9 149 34.2
CiPaw.12G011400 Carya illinoinensis HOM05D003370 ORTHO05D003848 1.3e-06 57.8 144 34.7
Ciclev10020533m.g Citrus clementina HOM05D003370 ORTHO05D003848 1.3e-06 57.8 140 35.0
BcaB07g33177 Brassica carinata HOM05D003370 ORTHO05D003848 2.3e-06 57.0 104 37.5
C06p10920 Brassica napus HOM05D003370 ORTHO05D003848 5.1e-06 55.8 106 38.7
Potri.008G122300 Populus trichocarpa HOM05D001683 ORTHO05D001627 5.1e-06 55.8 117 35.0
Solyc02g065020.2 Solanum lycopersicum HOM05D002458 ORTHO05D002603 5.1e-06 55.8 133 34.6
PGSC0003DMG400022132 Solanum tuberosum HOM05D003370 ORTHO05D003848 5.1e-06 55.8 150 31.3
ATR1098G156 Amborella trichopoda HOM05D003370 ORTHO05D003848 6.6e-06 55.5 152 33.6
CARHR087500 Cardamine hirsuta HOM05D003370 ORTHO05D003848 8.7e-06 55.1 101 39.6
Thhalv10021938m.g Eutrema salsugineum HOM05D003370 ORTHO05D003848 8.7e-06 55.1 101 42.6
Sabra08G0092900 Salix brachista HOM05D001683 ORTHO05D001627 8.7e-06 55.1 117 34.2


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