Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 1.0e-96 356.7 172 100.0
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 1.0e-96 356.7 172 100.0
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 1.9e-95 352.4 172 98.3
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 4.3e-95 351.3 172 97.7
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 4.3e-95 351.3 172 97.7
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 1.0e-93 346.7 169 98.8
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 1.0e-88 330.1 169 93.5
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 1.5e-87 326.2 170 91.8
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 2.5e-87 325.5 172 89.5
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 4.3e-87 324.7 169 90.5
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 4.7e-86 321.2 169 91.7
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 5.2e-85 317.8 169 91.1
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 2.3e-69 265.8 165 77.6
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 1.8e-53 213.0 167 64.1
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 4.9e-43 178.3 164 53.7
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 1.4e-42 176.8 169 53.3
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 1.4e-42 176.8 164 53.0
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 2.4e-42 176.0 164 52.4
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 2.4e-42 176.0 164 52.4
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 3.2e-42 175.6 169 52.7
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 7.1e-42 174.5 167 52.7
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 1.6e-41 173.3 172 52.9
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 6.0e-41 171.4 141 56.7
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 6.0e-41 171.4 156 52.6
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 7.9e-41 171.0 170 47.1
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 2.3e-40 169.5 168 53.0
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 3.0e-40 169.1 152 52.6
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 3.9e-40 168.7 147 55.1
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 3.9e-40 168.7 152 52.6
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 3.9e-40 168.7 161 51.6
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 5.1e-40 168.3 145 55.2
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 5.1e-40 168.3 170 51.2
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 5.1e-40 168.3 150 53.3
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 6.7e-40 167.9 151 52.3
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 8.7e-40 167.5 153 51.6
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 1.5e-39 166.8 141 58.2
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 1.9e-39 166.4 135 58.5
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 1.9e-39 166.4 168 52.4
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 1.9e-39 166.4 168 52.4
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 2.5e-39 166.0 135 58.5
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 3.3e-39 165.6 167 51.5
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 3.3e-39 165.6 135 58.5
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 4.3e-39 165.2 166 50.6
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 5.6e-39 164.9 168 52.4
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 5.6e-39 164.9 158 49.4
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 7.4e-39 164.5 157 52.2
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 7.4e-39 164.5 138 58.0
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 9.6e-39 164.1 146 54.8
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 2.1e-38 162.9 151 50.3
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 2.8e-38 162.5 154 51.3
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 2.8e-38 162.5 158 51.9
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 4.8e-38 161.8 153 52.9
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 8.2e-38 161.0 136 55.9
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 1.4e-37 160.2 160 50.0
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 2.4e-37 159.5 162 51.9
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 2.4e-37 159.5 163 51.5
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 3.1e-37 159.1 142 52.8
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 3.1e-37 159.1 135 57.0
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 4.0e-37 158.7 149 51.7
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 4.0e-37 158.7 162 50.6
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 4.0e-37 158.7 167 49.7
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 5.3e-37 158.3 146 51.4
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 5.3e-37 158.3 168 48.8
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 6.9e-37 157.9 146 54.8
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 6.9e-37 157.9 164 50.0
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 9.0e-37 157.5 158 50.6
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 1.5e-36 156.8 171 48.0
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 2.6e-36 156.0 127 55.9
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 2.6e-36 156.0 146 52.7
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 5.8e-36 154.8 147 53.7
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 1.0e-35 154.1 146 52.7
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 1.7e-35 153.3 154 48.7
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 2.2e-35 152.9 132 56.1
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 2.2e-35 152.9 156 49.4
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 2.2e-35 152.9 140 50.7
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 2.2e-35 152.9 120 56.7
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 4.9e-35 151.8 120 55.8
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 8.4e-35 151.0 162 48.8
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 1.4e-34 150.2 162 48.8
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 1.9e-34 149.8 168 47.6
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 2.5e-34 149.4 161 49.7
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 5.5e-34 148.3 160 46.2
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 1.2e-33 147.1 117 60.7
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 1.3e-32 143.7 146 50.0
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 3.9e-32 142.1 144 51.4
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 6.7e-32 141.4 137 51.8
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 3.7e-30 135.6 139 49.6
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 2.0e-28 129.8 128 48.4
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 1.0e-27 127.5 112 51.8
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 4.5e-20 102.1 117 47.0
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 3.2e-18 95.9 161 37.9
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 7.9e-17 91.3 106 43.4
Lsat_1_v5_gn_7_41320 Lactuca sativa HOM05D007677 ORTHO05D009728 1.5e-15 87.0 74 54.1
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 2.0e-15 86.7 106 42.5
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 7.4e-15 84.7 70 55.7
EL10Ac3g06358 Beta vulgaris HOM05D007677 ORTHO05D009728 1.8e-13 80.1 79 51.9
MBI17_g34455_MAGBIO Magnolia biondii HOM05D002055 ORTHO05D002120 6.9e-13 78.2 66 51.5
Potri.010G030701 Populus trichocarpa HOM05D007677 ORTHO05D009728 1.0e-11 74.3 89 46.1


User provided reference genes

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