Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p60240 Brassica napus HOM05D005051 ORTHO05D005945 0.0e+00 1256.1 631 100.0
BolC5t34674H Brassica oleracea HOM05D005051 ORTHO05D005945 0.0e+00 1245.3 635 98.9
BcaC05g29842 Brassica carinata HOM05D005051 ORTHO05D005945 0.0e+00 1240.3 635 98.7
BraA05t22834Z Brassica rapa HOM05D005051 ORTHO05D005945 0.0e+00 1182.5 642 93.5
A05p41070 Brassica napus HOM05D005051 ORTHO05D005945 0.0e+00 1179.5 642 93.3
BcaC05g29752 Brassica carinata HOM05D005051 ORTHO05D005945 0.0e+00 1146.0 631 91.9
AL3G18390 Arabidopsis lyrata HOM05D005051 ORTHO05D005945 0.0e+00 1088.6 648 85.6
AT3G07140 Arabidopsis thaliana HOM05D005051 ORTHO05D005945 0.0e+00 1083.2 647 84.7
Thhalv10020265m.g Eutrema salsugineum HOM05D005051 ORTHO05D005945 2.8e-309 1064.7 645 84.0
Carub.0003s0666 Capsella rubella HOM05D005051 ORTHO05D005945 3.6e-309 1064.3 647 83.6
CARHR081740 Cardamine hirsuta HOM05D005051 ORTHO05D005945 6.2e-309 1063.5 647 83.5
Aa31LG5G17700 Aethionema arabicum HOM05D005051 ORTHO05D005945 3.9e-295 1017.7 644 80.1
THA.LOC104818965 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 8.4e-282 973.4 645 76.4
THA.LOC104802665 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 1.4e-273 946.0 642 75.1
Atru.chr6.1506 Acer truncatum HOM05D005051 ORTHO05D005945 5.9e-243 844.3 670 64.8
Cpa.g.sc8.135 Carica papaya HOM05D005051 ORTHO05D005945 5.7e-238 827.8 663 65.0
Thecc.01G222800 Theobroma cacao HOM05D005051 ORTHO05D005945 2.0e-235 819.3 676 63.5
TWI36G0473 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 2.0e-235 819.3 658 64.3
COL.COLO4_15648 Corchorus olitorius HOM05D005051 ORTHO05D005945 3.4e-235 818.5 668 63.3
Haze_24821 Corylus avellana HOM05D005051 ORTHO05D005945 1.1e-233 813.5 671 63.6
Cfa002585 Carpinus fangiana HOM05D005051 ORTHO05D005945 4.2e-233 811.6 664 63.7
CiPaw.03G147700 Carya illinoinensis HOM05D005051 ORTHO05D005945 4.2e-233 811.6 671 63.0
Dinv19188 Davidia involucrata HOM05D005051 ORTHO05D005945 2.3e-231 805.8 659 63.0
Ciclev10019161m.g Citrus clementina HOM05D005051 ORTHO05D005945 3.9e-231 805.1 666 62.3
Duzib138G1384 Durio zibethinus HOM05D005051 ORTHO05D005945 8.8e-231 803.9 640 64.5
Actinidia30063 Actinidia chinensis HOM05D005051 ORTHO05D005945 1.1e-230 803.5 667 61.9
Duzib211G0096 Durio zibethinus HOM05D005051 ORTHO05D005945 2.0e-230 802.7 666 62.5
QL09p053053 Quercus lobata HOM05D005051 ORTHO05D005945 5.7e-230 801.2 672 62.1
Gohir.D07G164100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 1.7e-229 799.7 672 61.5
Gorai.001G188000 Gossypium raimondii HOM05D005051 ORTHO05D005945 8.2e-229 797.3 663 61.8
TAR365G1079 Trochodendron aralioides HOM05D005051 ORTHO05D005945 8.2e-229 797.3 654 63.6
Sp3g06080 Schrenkiella parvula HOM05D005051 ORTHO05D005945 1.8e-228 796.2 489 84.9
QL09p052190 Quercus lobata HOM05D005051 ORTHO05D005945 2.6e-227 792.3 663 62.3
Potri.014G190600 Populus trichocarpa HOM05D005051 ORTHO05D005945 1.7e-226 789.6 639 64.6
Gohir.A07G158000 Gossypium hirsutum HOM05D005051 ORTHO05D005945 5.0e-226 788.1 657 62.3
FAN24G2416 Fragaria x ananassa HOM05D005051 ORTHO05D005945 2.5e-225 785.8 660 61.8
FAN27G0551 Fragaria x ananassa HOM05D005051 ORTHO05D005945 1.2e-224 783.5 660 61.8
FvH4_2g18730 Fragaria vesca HOM05D005051 ORTHO05D005945 4.7e-224 781.6 660 61.7
CSS0047345 Camellia sinensis var. sinensis HOM05D005051 ORTHO05D005945 2.3e-223 779.2 645 62.3
Sabra14G0142400 Salix brachista HOM05D005051 ORTHO05D005945 2.3e-223 779.2 669 60.8
Gohir.D11G145300 Gossypium hirsutum HOM05D005051 ORTHO05D005945 1.5e-222 776.5 649 61.5
arahy.Tifrunner.gnm1.ann1.SK15G6 Arachis hypogaea HOM05D005051 ORTHO05D005945 3.3e-222 775.4 660 60.5
GSVIVG01011065001 Vitis vinifera HOM05D005051 ORTHO05D005945 5.7e-222 774.6 642 64.0
SalBow6G3716 Salvia bowleyana HOM05D005051 ORTHO05D005945 2.2e-221 772.7 650 60.9
Lj2A1128T45 Lonicera japonica HOM05D005051 ORTHO05D005945 3.7e-221 771.9 672 59.8
MD13G1217900 Malus domestica HOM05D005051 ORTHO05D005945 4.8e-221 771.5 656 60.8
Manes.13G046400 Manihot esculenta HOM05D005051 ORTHO05D005945 6.3e-221 771.2 656 61.6
ClCG09G008890 Citrullus lanatus HOM05D005051 ORTHO05D005945 7.0e-220 767.7 665 60.5
RcHm_v2.0_Chr6g0284351 Rosa chinensis HOM05D005051 ORTHO05D005945 9.1e-220 767.3 664 61.0
Sed0004391 Sechium edule HOM05D005051 ORTHO05D005945 1.6e-219 766.5 661 59.9
arahy.Tifrunner.gnm1.ann1.8DP3DE Arachis hypogaea HOM05D005051 ORTHO05D005945 2.0e-219 766.1 661 59.8
HanXRQChr04g0108251 Helianthus annuus HOM05D005051 ORTHO05D005945 2.7e-219 765.8 649 59.3
Cc01_g16860 Coffea canephora HOM05D005051 ORTHO05D005945 3.5e-219 765.4 665 58.9
Lj3g0013392 Lotus japonicus HOM05D005051 ORTHO05D005945 5.9e-219 764.6 637 61.2
MELO3C021052.2 Cucumis melo HOM05D005051 ORTHO05D005945 2.9e-218 762.3 662 59.5
Glyma.03G064400 Glycine max HOM05D005051 ORTHO05D005945 5.0e-218 761.5 661 59.5
CsaV3_7G026000 Cucumis sativus L. HOM05D005051 ORTHO05D005945 8.5e-218 760.8 662 60.0
Phvul.010G020500 Phaseolus vulgaris HOM05D005051 ORTHO05D005945 1.9e-217 759.6 637 61.7
Migut.D02493 Erythranthe guttata HOM05D005051 ORTHO05D005945 3.2e-217 758.8 640 60.3
Lalb_Chr13g0291091 Lupinus albus HOM05D005051 ORTHO05D005945 4.2e-217 758.4 639 62.0
MSTRG.18843 Avicennia marina HOM05D005051 ORTHO05D005945 7.2e-217 757.7 654 58.7
Solyc09g059960.3 Solanum lycopersicum HOM05D005051 ORTHO05D005945 7.2e-217 757.7 656 59.3
PGSC0003DMG400023098 Solanum tuberosum HOM05D005051 ORTHO05D005945 9.4e-217 757.3 655 59.2
Medtr8g013045 Medicago truncatula HOM05D005051 ORTHO05D005945 3.6e-216 755.4 663 59.6
Gohir.A11G139100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 4.7e-216 755.0 612 62.4
Ca_23236_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 1.0e-215 753.8 637 60.3
ECA236G0910 Erigeron canadensis HOM05D005051 ORTHO05D005945 2.3e-215 752.7 666 59.2
Sed0023522 Sechium edule HOM05D005051 ORTHO05D005945 4.0e-215 751.9 661 60.4
Sopen09g023140 Solanum pennellii HOM05D005051 ORTHO05D005945 5.2e-215 751.5 659 59.0
PGR083G2429 Punica granatum HOM05D005051 ORTHO05D005945 1.2e-214 750.4 673 58.8
Eucgr.E03305 Eucalyptus grandis HOM05D005051 ORTHO05D005945 1.5e-214 750.0 639 60.6
Lsat_1_v5_gn_8_89520 Lactuca sativa HOM05D005051 ORTHO05D005945 1.5e-214 750.0 653 59.6
Psat4g199920 Pisum sativum HOM05D005051 ORTHO05D005945 1.7e-213 746.5 663 59.4
VMungo1309G1922 Vigna mungo HOM05D005051 ORTHO05D005945 3.7e-213 745.3 638 61.0
Glyma.16G101100 Glycine max HOM05D005051 ORTHO05D005945 8.3e-213 744.2 638 60.2
Nn2g14125 Nelumbo nucifera HOM05D005051 ORTHO05D005945 1.1e-212 743.8 656 58.4
PSO384G3368 Papaver somniferum HOM05D005051 ORTHO05D005945 4.1e-212 741.9 670 57.2
TPR.G17135 Trifolium pratense HOM05D005051 ORTHO05D005945 4.1e-212 741.9 653 59.7
EL10Ac7g17867 Beta vulgaris HOM05D005051 ORTHO05D005945 5.4e-212 741.5 661 57.9
AUR62008933 Chenopodium quinoa HOM05D005051 ORTHO05D005945 9.1e-212 740.7 659 58.4
Peaxi162Scf00398g00089 Petunia axillaris HOM05D005051 ORTHO05D005945 2.0e-211 739.6 665 58.3
CAN.G3.1 Capsicum annuum HOM05D005051 ORTHO05D005945 3.5e-211 738.8 661 57.9
Nitab4.5_0000045g0340 Nicotiana tabacum HOM05D005051 ORTHO05D005945 1.7e-210 736.5 647 59.2
Ah.02g115620 Amaranthus hybridus HOM05D005051 ORTHO05D005945 3.8e-210 735.3 634 60.1
AUR62001109 Chenopodium quinoa HOM05D005051 ORTHO05D005945 1.1e-209 733.8 664 58.1
vmacro02772 Vaccinium macrocarpon HOM05D005051 ORTHO05D005945 1.5e-209 733.4 590 63.2
SGA_v2.0_scaffold171G38944 Striga asiatica HOM05D005051 ORTHO05D005945 2.5e-209 732.6 640 58.0
Oeu018495.2 Olea europaea HOM05D005051 ORTHO05D005945 1.2e-208 730.3 637 59.7
CDE05G0682 Ceratophyllum demersum HOM05D005051 ORTHO05D005945 5.9e-203 711.4 631 57.8
Sc17g0002210 Simmondsia chinensis HOM05D005051 ORTHO05D005945 2.5e-201 706.1 591 60.7
Aqoxy4G00040 Aquilegia oxysepala HOM05D005051 ORTHO05D005945 3.6e-200 702.2 660 55.9
Oeu035785.1 Olea europaea HOM05D005051 ORTHO05D005945 1.0e-199 700.7 656 56.6
PSO339G3208 Papaver somniferum HOM05D005051 ORTHO05D005945 2.3e-199 699.5 664 54.5
Gorai.007G155800 Gossypium raimondii HOM05D005051 ORTHO05D005945 4.0e-199 698.7 639 58.1
Zm00001eb269850 Zea mays HOM05D005051 ORTHO05D005945 4.0e-199 698.7 629 56.8
DCAR_012658 Daucus carota HOM05D005051 ORTHO05D005945 1.1e-196 690.6 623 58.6
Prupe.8G200800 Prunus persica HOM05D005051 ORTHO05D005945 5.4e-196 688.3 584 60.6
FAN15G1450 Fragaria x ananassa HOM05D005051 ORTHO05D005945 1.1e-191 674.1 584 60.1
MD16G1223000 Malus domestica HOM05D005051 ORTHO05D005945 4.4e-190 668.7 575 59.5
Sp2g19120 Schrenkiella parvula HOM05D005051 ORTHO05D005945 3.7e-181 639.0 554 63.0
SHI23570 Sapria himalayana HOM05D005051 ORTHO05D005945 4.1e-180 635.6 616 55.4
Medtr8g013050 Medicago truncatula HOM05D005051 ORTHO05D005945 2.6e-174 616.3 560 57.5
ATR0564G162 Amborella trichopoda HOM05D005051 ORTHO05D005945 2.5e-169 599.7 547 55.4
SEGI_10192 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 2.1e-163 580.1 556 54.9
Mapoly0173s0012 Marchantia polymorpha HOM05D005051 ORTHO05D005945 1.1e-151 541.2 664 46.1
Hund18405 Selenicereus undatus HOM05D005051 ORTHO05D005945 3.4e-150 536.2 491 56.6
SMO259G0038 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 3.0e-146 523.1 554 51.3
unitig_899.g15019 Utricularia gibba HOM05D005051 ORTHO05D005945 2.2e-128 463.8 418 55.7
Pp3c21_19350 Physcomitrium patens HOM05D005051 ORTHO05D005945 2.2e-125 453.8 620 42.4
SEGI_29510 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 1.1e-119 434.9 449 50.6
Actinidia31469 Actinidia chinensis HOM05D005051 ORTHO05D005945 5.3e-119 432.6 642 41.1
CBR_g44939 Chara braunii HOM05D005051 ORTHO05D005945 4.4e-113 412.9 835 34.3
TWI18G1080 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 7.7e-110 402.1 392 57.7
AagrBONN_evm.TU.Sc2ySwM_368.938 Anthoceros agrestis HOM05D005051 ORTHO05D005945 1.5e-100 371.3 568 40.3
QL09p053462 Quercus lobata HOM05D005051 ORTHO05D005945 1.0e-85 322.0 387 46.5
COL.COLO4_36899 Corchorus olitorius HOM05D005051 ORTHO05D005945 1.3e-85 321.6 198 73.7
Os11g0479232 Oryza sativa ssp. japonica HOM05D005051 ORTHO05D005945 4.7e-83 313.2 286 58.4
MCO05G006 Micromonas commoda HOM05D005051 ORTHO05D005945 2.9e-72 277.3 607 33.9
Glyma.13G182400 Glycine max HOM05D005051 ORTHO05D005945 1.5e-65 255.0 205 62.9
Ca_23237_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 1.2e-62 245.4 311 47.3
Glyma.13G196100 Glycine max HOM05D005051 ORTHO05D005945 2.6e-57 227.6 204 55.4
Cfa025345 Carpinus fangiana HOM05D005051 ORTHO05D005945 3.4e-57 227.3 649 29.0
PRCOL_00003451 Prasinoderma coloniale HOM05D002267 ORTHO05D005902 3.9e-53 213.8 629 29.1
Cre10.g441100 Chlamydomonas reinhardtii HOM05D005051 ORTHO05D005945 1.6e-51 208.4 693 27.1
Sed0011580 Sechium edule HOM05D005051 ORTHO05D005945 1.9e-47 194.9 386 38.1
HPP92_008216 Vanilla planifolia HOM05D005051 ORTHO05D005945 5.4e-47 193.4 175 55.4
QL09p048654 Quercus lobata HOM05D005051 ORTHO05D005945 4.6e-46 190.3 227 43.6
SMO259G0024 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 3.0e-45 187.6 366 36.6
Nitab4.5_0000345g0090 Nicotiana tabacum HOM05D005051 ORTHO05D000055 1.1e-44 185.7 146 67.1
SMO259G0021 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.5e-44 185.3 266 42.9
Glyma.13G059866 Glycine max HOM05D005051 ORTHO05D005945 3.8e-40 170.6 120 70.8
SMO174G0204 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 9.6e-36 156.0 264 38.3
TPR.G17133 Trifolium pratense HOM05D005051 ORTHO05D005945 2.5e-31 141.4 147 47.6
Zm00001eb184180 Zea mays HOM05D005051 ORTHO05D005945 3.2e-31 141.0 108 61.1
QL09p053457 Quercus lobata HOM05D005051 ORTHO05D005945 3.5e-30 137.5 173 47.4
Medtr6g061260 Medicago truncatula HOM05D005051 ORTHO05D005945 6.0e-30 136.7 123 59.3
unitig_899.g15018 Utricularia gibba HOM05D003904 ORTHO05D004378 9.6e-28 129.4 111 64.9
SMO108G0003 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.1e-27 128.3 216 37.5
SMO108G0001 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 6.3e-27 126.7 216 37.0
SMO108G0002 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 6.3e-27 126.7 216 37.0
SMO108G0004 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 6.3e-27 126.7 216 37.0
SMO108G0005 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 6.3e-27 126.7 216 37.0
SMO259G0028 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 4.1e-26 124.0 178 39.3
SMO259G0051 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 6.1e-22 110.2 157 41.4
SMO313G0001 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 1.3e-21 109.0 157 40.8
SMO259G0015 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 3.0e-21 107.8 157 40.8
SMO259G0055 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 5.7e-20 103.6 157 40.1
Glyma.13G258901 Glycine max HOM05D005051 ORTHO05D005945 1.6e-19 102.1 68 76.5
Glyma.13G368066 Glycine max HOM05D005051 ORTHO05D005945 1.4e-18 99.0 68 75.0
Glyma.13G258850 Glycine max HOM05D005051 ORTHO05D005945 5.3e-18 97.1 235 32.8
Glyma.13G368132 Glycine max HOM05D005051 ORTHO05D005945 1.4e-15 89.0 175 36.0
Hund18406 Selenicereus undatus HOM05D005051 ORTHO05D005945 1.4e-10 72.4 48 64.6
Lsat_1_v5_gn_5_150541 Lactuca sativa HOM05D005051 ORTHO05D048368 9.1e-10 69.7 75 50.7
Lsat_1_v5_gn_5_28021 Lactuca sativa HOM05D001978 ORTHO05D048368 1.5e-09 68.9 47 63.8
Medtr6g061110 Medicago truncatula HOM05D005051 ORTHO05D000004 1.7e-08 65.5 40 72.5


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