Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 1.6e-126 456.1 222 100.0
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 4.0e-122 441.4 226 97.3
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 6.0e-118 427.6 224 94.6
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 5.1e-117 424.5 224 93.8
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 3.1e-114 415.2 226 92.5
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 1.1e-100 370.2 218 84.4
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 4.5e-97 358.2 224 83.0
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 1.9e-95 352.8 225 78.7
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 1.0e-93 347.1 224 77.7
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 8.8e-85 317.4 230 72.6
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 1.7e-83 313.2 221 72.4
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 1.2e-78 297.0 231 65.4
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 1.6e-57 226.9 225 54.7
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 7.7e-57 224.6 222 54.1
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 7.7e-57 224.6 220 54.1
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 1.0e-56 224.2 218 52.8
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 1.0e-56 224.2 216 51.9
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 1.7e-56 223.4 221 53.4
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 2.9e-56 222.6 221 53.4
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 8.6e-56 221.1 218 53.7
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 8.6e-56 221.1 226 54.4
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 8.6e-56 221.1 223 52.0
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 3.3e-55 219.2 216 53.7
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 3.3e-55 219.2 217 51.2
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 5.6e-55 218.4 215 53.0
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 5.6e-55 218.4 218 51.8
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 7.3e-55 218.0 222 53.6
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 9.5e-55 217.6 229 52.8
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 9.5e-55 217.6 221 51.6
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 1.2e-54 217.2 219 52.5
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 2.8e-54 216.1 217 53.5
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 4.7e-54 215.3 222 51.4
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 8.0e-54 214.5 222 51.4
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 8.0e-54 214.5 215 54.4
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 8.0e-54 214.5 220 53.6
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 1.4e-53 213.8 218 51.4
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 1.4e-53 213.8 222 50.9
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 2.3e-53 213.0 218 51.8
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 4.0e-53 212.2 218 50.0
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 4.0e-53 212.2 230 48.7
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 8.9e-53 211.1 225 50.2
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 8.9e-53 211.1 220 49.1
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 1.5e-52 210.3 222 52.3
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 9.8e-52 207.6 215 51.6
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 1.7e-51 206.8 220 53.2
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 2.2e-51 206.5 224 49.1
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 2.2e-51 206.5 223 49.8
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 2.9e-51 206.1 214 46.7
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 4.9e-51 205.3 224 52.7
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 8.3e-51 204.5 221 49.3
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 8.3e-51 204.5 227 48.9
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 1.8e-50 203.4 220 48.2
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 1.8e-50 203.4 227 47.1
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 1.2e-49 200.7 216 50.9
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 1.2e-49 200.7 224 48.7
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 3.5e-49 199.1 221 48.4
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 5.9e-49 198.4 223 47.5
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 7.8e-49 198.0 225 45.8
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 7.8e-49 198.0 224 48.2
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 7.8e-49 198.0 221 48.0
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 1.0e-48 197.6 224 49.1
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 1.3e-48 197.2 223 50.2
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 2.3e-48 196.4 237 47.3
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 2.3e-48 196.4 221 48.4
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 2.3e-48 196.4 214 47.2
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 2.3e-48 196.4 220 46.8
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 6.6e-48 194.9 226 47.3
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 8.6e-48 194.5 214 50.5
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 1.5e-47 193.7 250 45.2
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 1.5e-47 193.7 214 48.1
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 2.5e-47 193.0 216 46.8
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 9.5e-47 191.0 152 61.8
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 2.8e-46 189.5 217 46.1
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 3.6e-46 189.1 217 46.5
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 8.0e-46 188.0 224 44.2
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 1.0e-45 187.6 218 45.0
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 1.8e-45 186.8 213 45.5
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 4.0e-45 185.7 244 43.4
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 1.2e-44 184.1 218 44.5
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 2.6e-44 183.0 224 47.8
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 5.8e-44 181.8 220 46.4
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 5.8e-44 181.8 174 54.0
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 1.7e-43 180.3 139 61.2
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 5.4e-42 175.3 221 44.3
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 5.4e-42 175.3 182 52.7
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 1.2e-41 174.1 219 45.2
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 2.0e-41 173.3 217 41.9
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 4.6e-41 172.2 124 63.7
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 3.9e-40 169.1 214 43.0
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 5.6e-39 165.2 212 41.5
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 1.4e-37 160.6 169 50.9
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 1.4e-34 150.6 250 39.2
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 4.3e-31 139.0 117 54.7
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 6.8e-29 131.7 180 40.6
C04p34930 Brassica napus HOM05D007112 ORTHO05D008930 1.2e-28 131.0 121 62.8
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 4.4e-28 129.0 156 46.8
BolC4t25047H Brassica oleracea HOM05D007112 ORTHO05D027530 9.9e-28 127.9 152 53.9
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 9.9e-28 127.9 120 52.5
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 4.9e-27 125.6 175 37.7
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 5.6e-23 112.1 185 36.8
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 7.3e-23 111.7 152 42.8
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 4.9e-19 99.0 122 45.1
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 1.4e-18 97.4 146 45.2
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 1.9e-18 97.1 78 60.3
BcaC06g35868 Brassica carinata HOM05D000032 ORTHO05D027530 1.7e-16 90.5 66 74.2
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 5.1e-16 89.0 61 62.3
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 1.1e-13 81.3 105 36.2
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 9.9e-12 74.7 194 32.5
BolC7t41477H Brassica oleracea HOM05D000032 ORTHO05D027530 1.3e-11 74.3 68 61.8
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 7.1e-10 68.6 144 35.4


User provided reference genes

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