Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p56640 Brassica napus HOM05D000892 ORTHO05D012816 1.5e-57 226.1 124 100.0
C05p56620 Brassica napus HOM05D000892 ORTHO05D012816 8.4e-53 210.3 122 94.3
BolC5t34328H Brassica oleracea HOM05D000892 ORTHO05D012816 8.4e-53 210.3 122 94.3
C05p56570 Brassica napus HOM05D000892 ORTHO05D012816 8.5e-37 157.1 122 76.2
BcaC05g29369 Brassica carinata HOM05D000892 ORTHO05D000750 2.1e-35 152.5 103 82.5
C05p56510 Brassica napus HOM05D000892 ORTHO05D000750 1.5e-33 146.4 102 82.4
BolC5t34316H Brassica oleracea HOM05D000892 ORTHO05D000750 1.5e-33 146.4 102 82.4
BraA05t22578Z Brassica rapa HOM05D000892 ORTHO05D000750 2.6e-33 145.6 103 80.6
BcaB06g25614 Brassica carinata HOM05D000892 ORTHO05D000750 4.4e-33 144.8 103 79.6
A05p37830 Brassica napus HOM05D000892 ORTHO05D000750 4.8e-32 141.4 103 78.6
A05p37850 Brassica napus HOM05D000892 ORTHO05D012816 2.6e-30 135.6 101 78.2
Thhalv10020761m.g Eutrema salsugineum HOM05D000892 ORTHO05D000750 1.5e-28 129.8 104 72.1
AT3G11490 Arabidopsis thaliana HOM05D000892 ORTHO05D000750 1.6e-27 126.3 106 70.8
BNapus_Darmor_BZH_scaffold_145p00160 Brassica napus HOM05D000892 ORTHO05D000750 8.0e-27 124.0 104 70.2
BcaB04g21134 Brassica carinata HOM05D000892 ORTHO05D000750 1.0e-26 123.6 103 68.0
Sp3g09720 Schrenkiella parvula HOM05D000892 ORTHO05D000750 1.4e-26 123.2 130 57.7
BraA01t04182Z Brassica rapa HOM05D000892 ORTHO05D000750 2.3e-26 122.5 104 69.2
BcaC09g48173 Brassica carinata HOM05D000892 ORTHO05D000750 3.3e-25 118.6 104 68.3
BolC1t05313H Brassica oleracea HOM05D000892 ORTHO05D000750 3.3e-25 118.6 104 68.3
AL3G23030 Arabidopsis lyrata HOM05D000892 ORTHO05D000750 4.4e-25 118.2 108 68.5
Carub.0003s1081 Capsella rubella HOM05D000892 ORTHO05D000750 4.1e-23 111.7 108 63.0
CARHR086040 Cardamine hirsuta HOM05D000892 ORTHO05D000750 9.1e-23 110.5 86 73.3
BraA05t22580Z Brassica rapa HOM05D000892 ORTHO05D012816 3.6e-19 98.6 109 59.6
BolC5t34327H Brassica oleracea HOM05D000892 ORTHO05D012816 7.5e-17 90.9 53 90.6
Aa31LG3G4850 Aethionema arabicum HOM05D000892 ORTHO05D000750 4.5e-14 81.6 82 61.0
THA.LOC104826823 Tarenaya hassleriana HOM05D000892 ORTHO05D000750 6.5e-13 77.8 114 47.4
THA.LOC104816591 Tarenaya hassleriana HOM05D000892 ORTHO05D000750 6.1e-11 71.2 87 54.0
Cpa.g.sc5.2 Carica papaya HOM05D000892 ORTHO05D000750 8.3e-08 60.8 67 55.2
QL01p012113 Quercus lobata HOM05D000892 ORTHO05D000750 3.1e-07 58.9 56 60.7
Hma1.2p1_0769F.1_g215890 Hydrangea macrophylla HOM05D000892 ORTHO05D000750 5.4e-07 58.2 81 48.1
Ciclev10011475m.g Citrus clementina HOM05D000892 ORTHO05D000750 1.2e-06 57.0 108 38.0
QL07p038596 Quercus lobata HOM05D000892 ORTHO05D000750 1.6e-06 56.6 70 54.3
Duzib128G1127 Durio zibethinus HOM05D000892 ORTHO05D000750 3.5e-06 55.5 111 38.7
MBI17_g08324_MAGBIO Magnolia biondii HOM05D000892 ORTHO05D000750 3.5e-06 55.5 89 47.2
Atru.chr8.1476 Acer truncatum HOM05D000892 ORTHO05D000750 4.5e-06 55.1 85 48.2
Manes.08G026700 Manihot esculenta HOM05D000892 ORTHO05D000750 4.5e-06 55.1 66 53.0
Manes.09G054000 Manihot esculenta HOM05D000892 ORTHO05D000750 4.5e-06 55.1 66 54.5
Zm00001eb118590 Zea mays HOM05D000892 ORTHO05D012816 4.5e-06 55.1 51 60.8
TPR.G4485 Trifolium pratense HOM05D000892 ORTHO05D012816 5.9e-06 54.7 121 36.4
GSVIVG01033865001 Vitis vinifera HOM05D000892 ORTHO05D000750 5.9e-06 54.7 75 48.0
Haze_23363 Corylus avellana HOM05D000892 ORTHO05D000750 7.7e-06 54.3 100 41.0
Prupe.7G104200 Prunus persica HOM05D000892 ORTHO05D000750 7.7e-06 54.3 64 53.1


User provided reference genes

Program Settings