Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p56540 Brassica napus HOM05D008594 ORTHO05D040328 6.8e-96 354.0 177 100.0
BolC5t34319H Brassica oleracea HOM05D008594 ORTHO05D040328 7.0e-77 290.8 144 100.0
C02p28150 Brassica napus HOM05D008594 ORTHO05D010820 1.9e-26 123.2 63 92.1
C06p27300 Brassica napus HOM05D008594 ORTHO05D010820 2.4e-24 116.3 69 84.1
BolC4t25598H Brassica oleracea HOM05D008594 ORTHO05D010820 5.3e-24 115.2 67 86.6
C09p19570 Brassica napus HOM05D008594 ORTHO05D010820 2.0e-23 113.2 69 81.2
C09p63700 Brassica napus HOM05D008594 ORTHO05D010820 2.6e-23 112.8 67 85.1
C06p04450 Brassica napus HOM05D008594 ORTHO05D010820 4.5e-23 112.1 70 81.4
C09p44770 Brassica napus HOM05D008594 ORTHO05D010820 4.5e-23 112.1 67 85.1
C02p18830 Brassica napus HOM05D008594 ORTHO05D010820 5.8e-23 111.7 67 82.1
C05p30930 Brassica napus HOM05D008594 ORTHO05D010820 1.3e-22 110.5 67 83.6
C09p57240 Brassica napus HOM05D008594 ORTHO05D010820 1.3e-22 110.5 67 82.1
BolC2t10126H Brassica oleracea HOM05D008594 ORTHO05D010820 1.3e-22 110.5 67 82.1
C08p26910 Brassica napus HOM05D008594 ORTHO05D010820 1.7e-22 110.2 69 79.7
BolC8t47374H Brassica oleracea HOM05D008594 ORTHO05D010820 2.2e-22 109.8 67 80.6
BolC9t54107H Brassica oleracea HOM05D008594 ORTHO05D010820 2.2e-22 109.8 67 82.1
C03p81760 Brassica napus HOM05D008594 ORTHO05D010820 8.4e-22 107.8 67 80.6
BolC3t20447H Brassica oleracea HOM05D008594 ORTHO05D010820 8.4e-22 107.8 67 80.6
BolC5t29373H Brassica oleracea HOM05D008594 ORTHO05D010820 8.4e-22 107.8 67 82.1
C03p24880 Brassica napus HOM05D008594 ORTHO05D010820 1.1e-21 107.5 69 81.2
BolC6t38368H Brassica oleracea HOM05D008594 ORTHO05D010820 1.4e-21 107.1 67 80.6
BolC7t42411H Brassica oleracea HOM05D008594 ORTHO05D010820 1.4e-21 107.1 67 83.6
C03p29250 Brassica napus HOM05D008594 ORTHO05D010820 1.9e-21 106.7 67 80.6
BolC7t45816H Brassica oleracea HOM05D008594 ORTHO05D010820 1.9e-21 106.7 64 84.4
BolC9t57351H Brassica oleracea HOM05D008594 ORTHO05D010820 1.9e-21 106.7 67 82.1
C02p39350 Brassica napus HOM05D008594 ORTHO05D010820 3.2e-21 105.9 67 79.1
BolC2t07626H Brassica oleracea HOM05D008594 ORTHO05D010820 3.2e-21 105.9 67 80.6
BolC9t58592H Brassica oleracea HOM05D008594 ORTHO05D010820 2.1e-20 103.2 67 77.6
BolC4t27537H Brassica oleracea HOM05D008594 ORTHO05D010820 2.7e-20 102.8 71 76.1
C03p45270 Brassica napus HOM05D008594 ORTHO05D010820 2.3e-19 99.8 67 77.6
C05p34840 Brassica napus HOM05D008594 ORTHO05D010820 7.4e-18 94.7 59 83.1
C03p68230 Brassica napus HOM05D008594 ORTHO05D010820 2.4e-16 89.7 55 80.0
BolC7t43534H Brassica oleracea HOM05D008594 ORTHO05D010820 3.2e-13 79.3 51 78.4
BcaC05g29370 Brassica carinata HOM05D000149 ORTHO05D000076 1.0e-11 74.3 49 73.5
C04p21060 Brassica napus HOM05D008594 ORTHO05D010820 1.3e-11 73.9 46 78.3
BolC6t35575H Brassica oleracea HOM05D008594 ORTHO05D010820 3.0e-11 72.8 47 76.6
CARHR086030 Cardamine hirsuta HOM05D000149 ORTHO05D000076 5.1e-11 72.0 49 75.5
C04p60370 Brassica napus HOM05D008594 ORTHO05D010820 6.7e-11 71.6 44 79.5
BolC3t19049H Brassica oleracea HOM05D008594 ORTHO05D010820 6.7e-11 71.6 44 79.5
BolC7t43117H Brassica oleracea HOM05D008594 ORTHO05D010820 6.7e-11 71.6 44 79.5
BolC9t59211H Brassica oleracea HOM05D008594 ORTHO05D010820 1.1e-10 70.9 44 79.5
C02p37090 Brassica napus HOM05D008594 ORTHO05D010820 1.5e-10 70.5 44 79.5
C02p18850 Brassica napus HOM05D008594 ORTHO05D010820 1.9e-10 70.1 44 77.3
BolC4t23630H Brassica oleracea HOM05D000935 ORTHO05D010820 3.3e-10 69.3 44 75.0
BcaB04g18642 Brassica carinata HOM05D000149 ORTHO05D000076 4.3e-10 68.9 49 73.5
BolC3t16789H Brassica oleracea HOM05D000935 ORTHO05D010820 4.3e-10 68.9 44 77.3
Thhalv10022292m.g Eutrema salsugineum HOM05D000149 ORTHO05D000076 4.3e-10 68.9 49 73.5
BolC2t08024H Brassica oleracea HOM05D000935 ORTHO05D010820 5.7e-10 68.6 44 75.0
BolC2t09945H Brassica oleracea HOM05D008594 ORTHO05D010820 5.7e-10 68.6 44 75.0
Carub.0003s1080 Capsella rubella HOM05D000149 ORTHO05D000076 1.6e-09 67.0 49 69.4
C03p44950 Brassica napus HOM05D000149 ORTHO05D000076 2.8e-09 66.2 49 71.4
BolC3t16753H Brassica oleracea HOM05D000149 ORTHO05D000076 2.8e-09 66.2 49 71.4
Sp3g09710 Schrenkiella parvula HOM05D000149 ORTHO05D000076 2.8e-09 66.2 49 71.4
A03p37080 Brassica napus HOM05D000149 ORTHO05D000076 3.7e-09 65.9 49 71.4
C03p73620 Brassica napus HOM05D008594 ORTHO05D010820 6.3e-09 65.1 33 97.0
C03p44930 Brassica napus HOM05D000149 ORTHO05D000076 1.1e-08 64.3 48 70.8
C03p16940 Brassica napus HOM05D008594 ORTHO05D010820 1.8e-08 63.5 40 77.5
AT3G11480 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 2.4e-08 63.2 49 67.3
AL3G23020 Arabidopsis lyrata HOM05D000149 ORTHO05D000076 9.0e-08 61.2 49 65.3
BcaC02g12056 Brassica carinata HOM05D008594 ORTHO05D010820 1.5e-07 60.5 32 93.8
C04p08400 Brassica napus HOM05D000139 ORTHO05D000103 1.5e-07 60.5 32 93.8
BolC3t20204H Brassica oleracea HOM05D008594 ORTHO05D010820 1.5e-07 60.5 50 68.0
BolC4t22439H Brassica oleracea HOM05D000139 ORTHO05D000103 1.5e-07 60.5 32 93.8
C05p56580 Brassica napus HOM05D000149 ORTHO05D000076 2.6e-07 59.7 47 70.2
C05p56600 Brassica napus HOM05D000149 ORTHO05D000076 2.6e-07 59.7 47 70.2
C05p56630 Brassica napus HOM05D000149 ORTHO05D000076 2.6e-07 59.7 47 70.2
BolC5t34320H Brassica oleracea HOM05D000149 ORTHO05D000076 2.6e-07 59.7 47 70.2
BolC5t34329H Brassica oleracea HOM05D000149 ORTHO05D000076 2.6e-07 59.7 47 70.2
BolC9t57254H Brassica oleracea HOM05D008594 ORTHO05D010096 2.6e-07 59.7 27 92.6
BolC5t30568H Brassica oleracea HOM05D000935 ORTHO05D009979 5.9e-07 58.5 38 78.9
BcaB06g25619 Brassica carinata HOM05D000149 ORTHO05D000076 1.0e-06 57.8 37 78.4
BolC3t14879H Brassica oleracea HOM05D008594 ORTHO05D010096 1.7e-06 57.0 27 88.9
A05p37860 Brassica napus HOM05D000149 ORTHO05D000076 2.9e-06 56.2 33 81.8
BraA05t22579Z Brassica rapa HOM05D000149 ORTHO05D000076 2.9e-06 56.2 33 81.8


User provided reference genes

Program Settings