Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 3.6e-177 624.8 313 100.0
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 1.1e-170 603.2 313 96.8
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 5.8e-167 590.9 313 94.9
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 1.3e-163 579.7 288 100.0
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 1.5e-159 566.2 312 89.7
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 5.8e-159 564.3 313 89.5
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 1.3e-158 563.1 317 89.9
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 5.1e-155 551.2 285 96.5
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 7.4e-154 547.4 313 87.5
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 2.6e-151 538.9 313 85.3
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 4.2e-149 531.6 307 86.3
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 7.1e-149 530.8 311 85.2
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 5.1e-147 524.6 307 85.7
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 8.7e-147 523.9 313 82.7
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 4.3e-146 521.5 301 87.0
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 8.2e-145 517.3 307 84.7
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 5.3e-144 514.6 313 82.4
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 2.6e-143 512.3 288 87.5
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 1.7e-113 413.3 298 65.4
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 2.4e-112 409.5 303 66.0
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 3.1e-112 409.1 305 66.2
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 5.3e-112 408.3 306 62.7
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 1.6e-111 406.8 303 64.7
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 2.0e-111 406.4 290 65.5
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 6.5e-110 401.4 306 62.1
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 1.9e-109 399.8 308 62.0
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 2.5e-109 399.4 307 62.5
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 2.5e-109 399.4 307 63.5
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 4.2e-109 398.7 305 60.3
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 7.2e-109 397.9 304 62.8
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 4.7e-108 395.2 305 62.6
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 6.1e-108 394.8 290 63.1
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 6.1e-108 394.8 295 61.7
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 2.3e-107 392.9 308 61.0
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 4.0e-107 392.1 295 63.1
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 6.7e-107 391.3 301 62.5
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 8.8e-107 391.0 299 62.5
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 3.3e-106 389.0 303 61.4
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 7.5e-106 387.9 311 59.5
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 9.7e-106 387.5 296 61.5
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 1.3e-105 387.1 311 59.5
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 1.7e-105 386.7 306 62.7
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 4.8e-105 385.2 292 62.0
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 6.3e-105 384.8 290 61.7
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 1.8e-104 383.3 302 59.6
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 5.3e-104 381.7 297 59.3
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 3.5e-103 379.0 280 65.7
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 5.9e-103 378.3 291 63.2
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 7.7e-103 377.9 302 60.9
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 1.7e-102 376.7 303 58.7
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 2.2e-102 376.3 322 57.5
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 1.1e-101 374.0 301 56.8
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 9.4e-101 370.9 301 56.5
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 8.0e-100 367.9 299 59.5
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 1.8e-99 366.7 294 59.5
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 3.0e-99 365.9 296 59.5
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 4.4e-98 362.1 296 58.8
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.1e-96 357.5 296 58.1
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 2.4e-96 356.3 299 54.5
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 3.8e-94 349.0 289 58.5
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 6.6e-94 348.2 291 56.0
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 1.2e-92 344.0 305 55.1
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 1.2e-92 344.0 292 56.2
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 4.7e-92 342.0 287 55.4
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 1.8e-91 340.1 301 55.8
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 5.2e-91 338.6 249 64.7
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 3.4e-90 335.9 305 55.1
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 5.7e-90 335.1 445 42.0
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 1.7e-89 333.6 261 58.6
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 3.7e-89 332.4 289 56.1
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 1.4e-88 330.5 307 53.1
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 3.5e-87 325.9 300 55.0
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 1.7e-86 323.6 235 64.3
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 2.9e-86 322.8 333 52.9
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 1.5e-85 320.5 306 50.3
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 5.6e-85 318.5 388 44.6
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 1.8e-83 313.5 279 53.0
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 8.9e-83 311.2 296 51.7
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 1.2e-82 310.8 250 59.2
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 9.8e-82 307.8 247 59.1
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 3.7e-81 305.8 350 48.6
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 1.1e-80 304.3 235 59.6
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 1.1e-77 294.3 236 58.1
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 7.3e-77 291.6 263 54.8
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 1.2e-76 290.8 232 57.8
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 2.1e-76 290.0 307 48.2
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 9.8e-74 281.2 222 63.5
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 8.3e-73 278.1 284 47.5
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 6.6e-70 268.5 210 59.0
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 1.5e-66 257.3 307 42.7
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 2.9e-65 253.1 209 58.4
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 1.0e-62 244.6 292 45.9
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 7.3e-61 238.4 194 59.8
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 1.1e-59 234.6 124 91.1
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 2.1e-55 220.3 171 60.8
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 3.1e-51 206.5 143 69.2
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 2.2e-49 200.3 192 53.1
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 2.3e-46 190.3 141 63.1
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 3.0e-46 189.9 147 58.5
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 8.7e-46 188.3 306 37.3
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 1.1e-45 188.0 192 50.0
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 1.6e-44 184.1 276 40.6
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.3e-41 174.5 102 72.5
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 2.2e-41 173.7 289 36.0
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 4.2e-40 169.5 221 37.6
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 3.5e-39 166.4 400 31.2
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 5.1e-38 162.5 79 93.7
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 2.8e-36 156.8 136 52.9
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 4.9e-33 146.0 83 74.7
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 6.4e-33 145.6 98 64.3
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 1.1e-29 134.8 140 53.6
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 1.8e-27 127.5 74 75.7
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 7.6e-26 122.1 92 56.5
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 1.3e-25 121.3 284 30.3
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 3.3e-21 106.7 290 29.0
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 6.3e-20 102.4 340 27.4
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 7.9e-15 85.5 61 67.2
Cfa021542 Carpinus fangiana HOM05D000750 ORTHO05D011662 2.9e-09 67.0 47 66.0
Hma1.2p1_1624F.1_g294270 Hydrangea macrophylla HOM05D000554 ORTHO05D000860 1.9e-08 64.3 44 61.4
Sabra16G0075600 Salix brachista HOM05D006689 ORTHO05D008349 4.2e-08 63.2 46 58.7
arahy.Tifrunner.gnm1.ann1.HW4B1R Arachis hypogaea HOM05D006689 ORTHO05D008349 7.9e-07 58.9 36 69.4
Hund19874 Selenicereus undatus HOM05D006689 ORTHO05D008349 6.7e-06 55.8 44 54.5


User provided reference genes

Program Settings