Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p55900 Brassica napus HOM05D007923 ORTHO05D009651 3.8e-37 157.5 72 100.0
BcaC08g44686 Brassica carinata HOM05D007923 ORTHO05D009651 2.2e-29 131.7 70 82.9
C06p22200 Brassica napus HOM05D007923 ORTHO05D009651 2.5e-28 128.3 68 82.4
BolC6t37406H Brassica oleracea HOM05D007923 ORTHO05D009651 3.2e-28 127.9 68 83.8
BraA05t22535Z Brassica rapa HOM05D007923 ORTHO05D009651 6.0e-27 123.6 62 91.9
BraA05t22534Z Brassica rapa HOM05D007923 ORTHO05D009651 5.1e-26 120.6 62 90.3
BcaC05g29302 Brassica carinata HOM05D007923 ORTHO05D009651 6.7e-26 120.2 62 88.7
C05p55870 Brassica napus HOM05D007923 ORTHO05D009651 6.7e-26 120.2 62 88.7
BolC5t34256H Brassica oleracea HOM05D007923 ORTHO05D009651 6.7e-26 120.2 62 88.7
A05p37350 Brassica napus HOM05D007923 ORTHO05D009651 1.5e-25 119.0 62 88.7
BraA05t22532Z Brassica rapa HOM05D007923 ORTHO05D009651 1.5e-25 119.0 62 88.7
A05p37340 Brassica napus HOM05D007923 ORTHO05D009651 1.9e-25 118.6 62 88.7
BraA05t22531Z Brassica rapa HOM05D007923 ORTHO05D009651 1.9e-25 118.6 62 88.7
BcaB06g25556 Brassica carinata HOM05D007923 ORTHO05D009651 2.5e-25 118.2 62 85.5
A05p37360 Brassica napus HOM05D007923 ORTHO05D009651 2.5e-25 118.2 62 88.7
BraA05t22533Z Brassica rapa HOM05D007923 ORTHO05D009651 2.5e-25 118.2 62 88.7
BcaC05g29304 Brassica carinata HOM05D007923 ORTHO05D009651 4.3e-25 117.5 62 87.1
C05p55880 Brassica napus HOM05D007923 ORTHO05D009651 4.3e-25 117.5 62 87.1
BolC5t34257H Brassica oleracea HOM05D007923 ORTHO05D009651 4.3e-25 117.5 62 87.1
BcaB06g25567 Brassica carinata HOM05D007923 ORTHO05D009651 2.1e-24 115.2 66 75.8
BcaC05g29305 Brassica carinata HOM05D007923 ORTHO05D009651 1.2e-22 109.4 62 80.6
C05p55890 Brassica napus HOM05D007923 ORTHO05D009651 1.2e-22 109.4 62 80.6
BolC5t34258H Brassica oleracea HOM05D007923 ORTHO05D009651 1.2e-22 109.4 62 80.6
BcaC05g29301 Brassica carinata HOM05D007923 ORTHO05D009651 2.2e-16 88.6 62 66.1
C05p55860 Brassica napus HOM05D007923 ORTHO05D009651 2.2e-16 88.6 62 66.1
BolC5t34255H Brassica oleracea HOM05D007923 ORTHO05D009651 2.2e-16 88.6 62 66.1
A05p37330 Brassica napus HOM05D007923 ORTHO05D009651 3.7e-16 87.8 57 71.9
BraA05t22530Z Brassica rapa HOM05D007923 ORTHO05D009651 3.7e-16 87.8 57 71.9
Sp3g10220 Schrenkiella parvula HOM05D007923 ORTHO05D009651 4.8e-16 87.4 59 66.1
BcaC05g29300 Brassica carinata HOM05D007923 ORTHO05D009651 3.1e-15 84.7 62 64.5
C05p55840 Brassica napus HOM05D007923 ORTHO05D009651 3.1e-15 84.7 62 64.5
BolC5t34253H Brassica oleracea HOM05D007923 ORTHO05D009651 3.1e-15 84.7 62 64.5
CARHR179580 Cardamine hirsuta HOM05D007923 ORTHO05D009651 6.9e-15 83.6 47 72.3
AL5G13880 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 5.9e-14 80.5 62 58.1
CARHR086550 Cardamine hirsuta HOM05D007923 ORTHO05D009651 5.9e-14 80.5 58 56.9
AL3G23600 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.3e-13 79.3 58 56.9
AT1G45190 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.3e-13 79.3 58 55.2
AL5G13890 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.7e-13 79.0 62 56.5
AL5G13900 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.7e-13 79.0 62 56.5
AL5G13910 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.7e-13 79.0 62 56.5
Carub.0008s0480 Capsella rubella HOM05D007923 ORTHO05D009651 1.7e-13 79.0 52 59.6
Thhalv10022160m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 1.7e-13 79.0 56 60.7
AL1G53940 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.9e-13 78.2 62 53.2
AT3G11990 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.8e-13 77.8 50 60.0
AT1G47470 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 6.5e-13 77.0 57 57.9
AL9U10560 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.5e-12 75.1 53 60.4
BcaC09g48206 Brassica carinata HOM05D007923 ORTHO05D009651 3.2e-12 74.7 50 70.0
BolC1t05274H Brassica oleracea HOM05D007923 ORTHO05D009651 3.2e-12 74.7 50 70.0
BraA01t04147Z Brassica rapa HOM05D007923 ORTHO05D009651 3.2e-12 74.7 50 70.0
AT2G04031 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 5.5e-12 73.9 55 54.5
THA.LOC104799715 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 9.4e-12 73.2 48 54.2
AT2G04037 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.6e-11 72.4 55 52.7
AL5G13870 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.1e-11 72.0 58 53.4
AT5G35405 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.0e-10 69.7 47 59.6
AT2G04041 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.4e-10 69.3 55 49.1
AT4G13263 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.8e-10 68.9 47 59.6
Carub.0006s2829 Capsella rubella HOM05D007923 ORTHO05D009651 1.8e-10 68.9 62 48.4
AT4G13261 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 2.3e-10 68.6 47 57.4
BcaB04g20407 Brassica carinata HOM05D007923 ORTHO05D009651 3.9e-10 67.8 50 62.0
CARHR103140 Cardamine hirsuta HOM05D007923 ORTHO05D009651 5.7e-09 63.9 49 46.9
Thhalv10012072m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 2.8e-08 61.6 55 43.6
CARHR043170 Cardamine hirsuta HOM05D007923 ORTHO05D009651 6.3e-08 60.5 49 42.9
THA.LOC104810160 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 8.2e-08 60.1 48 47.9
Carub.0001s4211 Capsella rubella HOM05D007923 ORTHO05D009651 4.1e-07 57.8 55 43.6
Sp1g39520 Schrenkiella parvula HOM05D007923 ORTHO05D009651 4.1e-07 57.8 48 41.7
AL1G61300 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 5.3e-07 57.4 57 40.4
AT1G47450 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 5.3e-07 57.4 51 51.0
AT1G52970 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 5.3e-07 57.4 57 38.6
THA.LOC104813239 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 9.1e-07 56.6 46 52.2
THA.LOC104817628 Tarenaya hassleriana HOM05D007923 ORTHO05D009976 9.1e-07 56.6 46 52.2
COL.COLO4_10003 Corchorus olitorius HOM05D007923 ORTHO05D009651 2.6e-06 55.1 52 44.2
BcaC09g48207 Brassica carinata HOM05D007923 ORTHO05D009651 5.9e-06 53.9 64 45.3
Eucgr.C00224 Eucalyptus grandis HOM05D007923 ORTHO05D009651 5.9e-06 53.9 53 43.4
Carub.0006s2294 Capsella rubella HOM05D007888 ORTHO05D009976 7.7e-06 53.5 44 40.9


User provided reference genes

Program Settings