Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p55890 Brassica napus HOM05D007923 ORTHO05D009651 2.8e-91 338.6 166 100.0
BolC5t34258H Brassica oleracea HOM05D007923 ORTHO05D009651 2.8e-91 338.6 166 100.0
BcaC05g29305 Brassica carinata HOM05D007923 ORTHO05D009651 3.3e-84 315.1 152 100.0
BcaC05g29302 Brassica carinata HOM05D007923 ORTHO05D009651 2.0e-78 295.8 166 87.3
C05p55870 Brassica napus HOM05D007923 ORTHO05D009651 2.0e-78 295.8 166 87.3
BolC5t34256H Brassica oleracea HOM05D007923 ORTHO05D009651 2.0e-78 295.8 166 87.3
BcaC05g29304 Brassica carinata HOM05D007923 ORTHO05D009651 1.5e-76 289.7 166 86.1
C05p55880 Brassica napus HOM05D007923 ORTHO05D009651 1.5e-76 289.7 166 86.1
BolC5t34257H Brassica oleracea HOM05D007923 ORTHO05D009651 1.5e-76 289.7 166 86.1
BraA05t22534Z Brassica rapa HOM05D007923 ORTHO05D009651 2.8e-75 285.4 166 85.5
A05p37340 Brassica napus HOM05D007923 ORTHO05D009651 6.2e-75 284.3 166 84.9
BraA05t22531Z Brassica rapa HOM05D007923 ORTHO05D009651 6.2e-75 284.3 166 84.9
A05p37350 Brassica napus HOM05D007923 ORTHO05D009651 4.0e-74 281.6 166 84.3
BraA05t22532Z Brassica rapa HOM05D007923 ORTHO05D009651 4.0e-74 281.6 166 84.3
BraA05t22533Z Brassica rapa HOM05D007923 ORTHO05D009651 4.0e-74 281.6 166 84.3
A05p37360 Brassica napus HOM05D007923 ORTHO05D009651 2.9e-72 275.4 160 85.0
BraA05t22535Z Brassica rapa HOM05D007923 ORTHO05D009651 5.4e-71 271.2 166 79.5
BcaB06g25567 Brassica carinata HOM05D007923 ORTHO05D009651 1.6e-67 259.6 165 78.2
BcaB06g25556 Brassica carinata HOM05D007923 ORTHO05D009651 8.9e-66 253.8 165 77.0
A05p37330 Brassica napus HOM05D007923 ORTHO05D009651 1.2e-59 233.4 160 72.5
BraA05t22530Z Brassica rapa HOM05D007923 ORTHO05D009651 1.2e-59 233.4 160 72.5
BcaC05g29301 Brassica carinata HOM05D007923 ORTHO05D009651 2.1e-59 232.6 165 70.9
C05p55860 Brassica napus HOM05D007923 ORTHO05D009651 2.1e-59 232.6 165 70.9
BolC5t34255H Brassica oleracea HOM05D007923 ORTHO05D009651 2.1e-59 232.6 165 70.9
BcaC05g29300 Brassica carinata HOM05D007923 ORTHO05D009651 8.1e-59 230.7 165 69.7
C05p55840 Brassica napus HOM05D007923 ORTHO05D009651 8.1e-59 230.7 165 69.7
BolC5t34253H Brassica oleracea HOM05D007923 ORTHO05D009651 8.1e-59 230.7 165 69.7
AL3G23600 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.5e-44 182.6 161 57.1
AT1G45190 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 5.6e-44 181.4 161 55.3
Sp3g10220 Schrenkiella parvula HOM05D007923 ORTHO05D009651 7.3e-44 181.0 162 56.2
AT1G47470 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 4.8e-43 178.3 160 55.0
CARHR086550 Cardamine hirsuta HOM05D007923 ORTHO05D009651 4.0e-42 175.3 161 50.9
AT3G11990 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.4e-41 172.2 160 53.1
Carub.0008s0480 Capsella rubella HOM05D007923 ORTHO05D009651 5.8e-41 171.4 161 52.2
BcaC09g48206 Brassica carinata HOM05D007923 ORTHO05D009651 9.9e-41 170.6 161 54.7
BolC1t05274H Brassica oleracea HOM05D007923 ORTHO05D009651 9.9e-41 170.6 161 54.7
C06p22200 Brassica napus HOM05D007923 ORTHO05D009651 1.7e-40 169.9 165 57.0
BraA01t04147Z Brassica rapa HOM05D007923 ORTHO05D009651 4.9e-40 168.3 161 53.4
BolC6t37406H Brassica oleracea HOM05D007923 ORTHO05D009651 7.1e-39 164.5 165 56.4
Thhalv10022160m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 7.9e-38 161.0 168 53.0
BcaC08g44686 Brassica carinata HOM05D007923 ORTHO05D009651 3.3e-36 155.6 88 80.7
AL1G53940 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 5.8e-33 144.8 165 46.7
CARHR179580 Cardamine hirsuta HOM05D007923 ORTHO05D009651 1.0e-29 134.0 155 45.8
BcaB04g20407 Brassica carinata HOM05D007923 ORTHO05D009651 2.5e-28 129.4 117 53.8
AL9U10560 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 4.3e-28 128.6 161 47.2
AT4G13263 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.3e-27 127.1 161 47.2
AT4G13261 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.6e-27 126.7 161 46.0
AT5G35405 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.7e-27 125.6 161 46.6
AL5G13880 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 4.8e-27 125.2 165 43.6
AL5G13890 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 8.2e-27 124.4 165 43.0
Carub.0006s2829 Capsella rubella HOM05D007923 ORTHO05D009651 8.2e-27 124.4 165 41.2
AT2G04037 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 2.4e-26 122.9 161 44.1
AL5G13870 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.2e-25 120.6 161 42.9
AT1G47450 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 2.2e-24 116.3 162 44.4
AL5G13900 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 7.1e-23 111.3 209 34.9
AL5G13910 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.7e-22 109.4 144 42.4
C05p55900 Brassica napus HOM05D007923 ORTHO05D009651 3.5e-22 109.0 62 80.6
AT2G04031 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.9e-21 105.5 161 39.1
AT2G04041 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 2.2e-19 99.8 161 37.3
BcaC08g44685 Brassica carinata HOM05D007923 ORTHO05D009651 4.8e-19 98.6 69 75.4
BcaC09g48207 Brassica carinata HOM05D007923 ORTHO05D009651 5.3e-18 95.1 167 38.3
C05p55910 Brassica napus HOM05D007923 ORTHO05D009651 2.6e-17 92.8 67 71.6
BolC5t34259H Brassica oleracea HOM05D007923 ORTHO05D009651 2.6e-17 92.8 67 71.6
THA.LOC104799715 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 1.7e-16 90.1 122 35.2
BcaC05g29303 Brassica carinata HOM05D007923 ORTHO05D009651 2.5e-15 86.3 50 88.0
THA.LOC104810160 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 7.2e-15 84.7 126 38.1
Carub.0001s4211 Capsella rubella HOM05D007923 ORTHO05D009651 1.5e-12 77.0 108 36.1
Thhalv10012072m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 5.3e-10 68.6 104 35.6
AL1G61300 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.5e-09 67.0 119 31.9
Sp1g39520 Schrenkiella parvula HOM05D007923 ORTHO05D009651 1.5e-09 67.0 112 33.0
CARHR043170 Cardamine hirsuta HOM05D007923 ORTHO05D009651 2.0e-09 66.6 104 32.7
AT1G52970 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 4.5e-09 65.5 112 30.4
CARHR103140 Cardamine hirsuta HOM05D007923 ORTHO05D009651 4.5e-09 65.5 163 28.8
Eucgr.C00224 Eucalyptus grandis HOM05D007923 ORTHO05D009651 1.7e-08 63.5 82 40.2
THA.LOC104803521 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 5.0e-08 62.0 79 35.4
PGR031G1959 Punica granatum HOM05D007923 ORTHO05D009651 9.4e-07 57.8 102 32.4
RcHm_v2.0_Chr2g0133141 Rosa chinensis HOM05D012941 ORTHO05D009651 1.2e-06 57.4 81 30.9
Eucgr.C00225 Eucalyptus grandis HOM05D008402 ORTHO05D009651 6.1e-06 55.1 82 35.4


User provided reference genes

Program Settings