Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g29304 Brassica carinata HOM05D007923 ORTHO05D009651 4.0e-90 334.7 166 100.0
C05p55880 Brassica napus HOM05D007923 ORTHO05D009651 4.0e-90 334.7 166 100.0
BolC5t34257H Brassica oleracea HOM05D007923 ORTHO05D009651 4.0e-90 334.7 166 100.0
BcaC05g29302 Brassica carinata HOM05D007923 ORTHO05D009651 7.8e-86 320.5 166 95.2
C05p55870 Brassica napus HOM05D007923 ORTHO05D009651 7.8e-86 320.5 166 95.2
BolC5t34256H Brassica oleracea HOM05D007923 ORTHO05D009651 7.8e-86 320.5 166 95.2
A05p37340 Brassica napus HOM05D007923 ORTHO05D009651 1.7e-85 319.3 166 95.2
BraA05t22531Z Brassica rapa HOM05D007923 ORTHO05D009651 1.7e-85 319.3 166 95.2
A05p37350 Brassica napus HOM05D007923 ORTHO05D009651 1.1e-84 316.6 166 94.6
BraA05t22532Z Brassica rapa HOM05D007923 ORTHO05D009651 1.1e-84 316.6 166 94.6
BraA05t22534Z Brassica rapa HOM05D007923 ORTHO05D009651 1.1e-84 316.6 166 94.6
BraA05t22533Z Brassica rapa HOM05D007923 ORTHO05D009651 5.6e-84 314.3 166 94.0
A05p37360 Brassica napus HOM05D007923 ORTHO05D009651 1.2e-81 306.6 160 94.4
C05p55890 Brassica napus HOM05D007923 ORTHO05D009651 1.2e-75 286.6 166 86.1
BolC5t34258H Brassica oleracea HOM05D007923 ORTHO05D009651 1.2e-75 286.6 166 86.1
BraA05t22535Z Brassica rapa HOM05D007923 ORTHO05D009651 1.7e-72 276.2 166 81.3
BcaC05g29305 Brassica carinata HOM05D007923 ORTHO05D009651 1.1e-68 263.5 152 84.9
BcaB06g25567 Brassica carinata HOM05D007923 ORTHO05D009651 8.1e-67 257.3 165 78.2
BcaB06g25556 Brassica carinata HOM05D007923 ORTHO05D009651 2.0e-65 252.7 165 76.4
A05p37330 Brassica napus HOM05D007923 ORTHO05D009651 4.3e-60 235.0 160 73.8
BraA05t22530Z Brassica rapa HOM05D007923 ORTHO05D009651 4.3e-60 235.0 160 73.8
BcaC05g29301 Brassica carinata HOM05D007923 ORTHO05D009651 7.3e-60 234.2 165 72.1
C05p55860 Brassica napus HOM05D007923 ORTHO05D009651 7.3e-60 234.2 165 72.1
BolC5t34255H Brassica oleracea HOM05D007923 ORTHO05D009651 7.3e-60 234.2 165 72.1
BcaC05g29300 Brassica carinata HOM05D007923 ORTHO05D009651 6.8e-58 227.6 165 69.7
C05p55840 Brassica napus HOM05D007923 ORTHO05D009651 6.8e-58 227.6 165 69.7
BolC5t34253H Brassica oleracea HOM05D007923 ORTHO05D009651 6.8e-58 227.6 165 69.7
AL3G23600 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 3.2e-47 192.2 161 60.2
Sp3g10220 Schrenkiella parvula HOM05D007923 ORTHO05D009651 4.6e-46 188.3 162 58.6
AT1G45190 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.0e-45 187.2 161 57.1
CARHR086550 Cardamine hirsuta HOM05D007923 ORTHO05D009651 1.7e-45 186.4 161 55.9
AT1G47470 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.1e-44 183.7 160 56.9
AT3G11990 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.9e-44 183.0 160 56.9
C06p22200 Brassica napus HOM05D007923 ORTHO05D009651 1.4e-42 176.8 165 58.8
Carub.0008s0480 Capsella rubella HOM05D007923 ORTHO05D009651 1.8e-42 176.4 161 54.7
BcaC09g48206 Brassica carinata HOM05D007923 ORTHO05D009651 1.5e-41 173.3 161 56.5
BolC1t05274H Brassica oleracea HOM05D007923 ORTHO05D009651 1.5e-41 173.3 161 56.5
BolC6t37406H Brassica oleracea HOM05D007923 ORTHO05D009651 5.8e-41 171.4 165 58.2
BraA01t04147Z Brassica rapa HOM05D007923 ORTHO05D009651 7.6e-41 171.0 161 55.3
Thhalv10022160m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 1.4e-39 166.8 168 54.8
BcaC08g44686 Brassica carinata HOM05D007923 ORTHO05D009651 7.9e-38 161.0 88 83.0
AL1G53940 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.4e-34 149.4 165 47.9
CARHR179580 Cardamine hirsuta HOM05D007923 ORTHO05D009651 2.9e-32 142.5 155 49.0
Carub.0006s2829 Capsella rubella HOM05D007923 ORTHO05D009651 3.5e-30 135.6 165 43.6
AL9U10560 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.5e-28 130.2 161 47.2
AL5G13880 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.9e-28 129.8 165 44.2
AT4G13261 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 2.5e-28 129.4 161 46.6
AL5G13890 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 3.3e-28 129.0 165 43.6
AT4G13263 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.3e-28 129.0 161 47.2
AT5G35405 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 9.6e-28 127.5 161 46.6
BcaB04g20407 Brassica carinata HOM05D007923 ORTHO05D009651 1.3e-27 127.1 117 54.7
AL5G13870 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 4.8e-27 125.2 161 43.5
AT1G47450 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.1e-26 122.5 162 46.3
AT2G04037 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 2.0e-25 119.8 161 43.5
C05p55900 Brassica napus HOM05D007923 ORTHO05D009651 1.0e-24 117.5 62 87.1
AL5G13910 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.9e-24 115.9 144 43.8
AL5G13900 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.4e-23 113.6 209 35.4
AT2G04031 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 8.7e-21 104.4 161 39.8
BcaC09g48207 Brassica carinata HOM05D007923 ORTHO05D009651 2.2e-19 99.8 167 38.9
AT2G04041 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 2.8e-19 99.4 161 37.3
THA.LOC104799715 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 4.8e-19 98.6 122 38.5
BcaC05g29303 Brassica carinata HOM05D007923 ORTHO05D009651 1.8e-18 96.7 50 100.0
BcaC08g44685 Brassica carinata HOM05D007923 ORTHO05D009651 2.0e-17 93.2 69 72.5
C05p55910 Brassica napus HOM05D007923 ORTHO05D009651 1.0e-16 90.9 67 70.1
BolC5t34259H Brassica oleracea HOM05D007923 ORTHO05D009651 1.0e-16 90.9 67 70.1
THA.LOC104810160 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 2.2e-16 89.7 126 40.5
Carub.0001s4211 Capsella rubella HOM05D007923 ORTHO05D009651 1.2e-14 84.0 113 38.1
CARHR103140 Cardamine hirsuta HOM05D007923 ORTHO05D009651 6.7e-13 78.2 153 33.3
Thhalv10012072m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 4.3e-12 75.5 104 39.4
Sp1g39520 Schrenkiella parvula HOM05D007923 ORTHO05D009651 7.4e-12 74.7 90 40.0
AL1G61300 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.8e-11 72.8 132 32.6
CARHR043170 Cardamine hirsuta HOM05D007923 ORTHO05D009651 2.8e-11 72.8 127 31.5
AT1G52970 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.1e-10 69.3 111 31.5
THA.LOC104803521 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 2.0e-09 66.6 77 39.0
COL.COLO4_10003 Corchorus olitorius HOM05D007923 ORTHO05D009651 3.4e-09 65.9 156 28.8
Eucgr.C00224 Eucalyptus grandis HOM05D007923 ORTHO05D009651 1.0e-08 64.3 83 38.6
PGR031G1959 Punica granatum HOM05D007923 ORTHO05D009651 3.8e-08 62.4 111 30.6
THA.LOC104813239 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 3.2e-07 59.3 87 34.5
Cpa.g.sc4.156 Carica papaya HOM05D007923 ORTHO05D009651 7.2e-07 58.2 90 33.3
THA.LOC104817628 Tarenaya hassleriana HOM05D007923 ORTHO05D009976 2.1e-06 56.6 79 35.4
Medtr5g097880 Medicago truncatula HOM05D010700 ORTHO05D012225 3.6e-06 55.8 78 34.6


User provided reference genes

Program Settings