Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 1.1e-150 536.6 262 100.0
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 1.1e-150 536.6 262 100.0
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 7.8e-149 530.4 262 99.6
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 6.2e-138 494.2 255 94.1
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 1.3e-135 486.5 255 93.7
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 9.6e-131 470.3 255 89.8
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 5.3e-129 464.5 258 91.5
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 1.6e-122 443.0 255 86.3
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 3.6e-122 441.8 257 84.4
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 2.4e-121 439.1 255 84.3
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 2.9e-119 432.2 257 84.0
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 3.8e-119 431.8 255 85.9
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 1.4e-102 376.7 256 75.4
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 4.3e-99 365.2 252 73.0
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 1.5e-96 356.7 174 98.3
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 5.9e-96 354.8 236 73.3
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 7.7e-96 354.4 254 68.1
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 1.3e-95 353.6 200 82.0
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 1.7e-95 353.2 258 67.1
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 5.0e-95 351.7 218 78.4
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 1.4e-94 350.1 213 77.5
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 1.9e-94 349.7 218 78.0
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 4.2e-94 348.6 230 73.5
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 7.2e-94 347.8 233 71.7
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 7.2e-94 347.8 233 71.7
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 7.2e-94 347.8 256 68.4
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 1.6e-93 346.7 212 77.4
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 1.6e-93 346.7 212 77.4
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 2.1e-93 346.3 250 68.4
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 7.9e-93 344.4 242 70.7
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 1.0e-92 344.0 246 68.3
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 1.4e-92 343.6 200 79.0
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 1.4e-92 343.6 200 80.0
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 1.4e-92 343.6 259 67.2
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 1.8e-92 343.2 200 78.5
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 1.8e-92 343.2 209 77.5
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 2.3e-92 342.8 257 66.9
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 3.0e-92 342.4 199 81.4
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 3.0e-92 342.4 206 78.6
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 3.9e-92 342.0 235 70.2
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 5.1e-92 341.7 261 67.0
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 6.7e-92 341.3 208 77.4
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 8.8e-92 340.9 231 71.4
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 1.1e-91 340.5 213 75.6
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 1.1e-91 340.5 225 72.4
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 1.1e-91 340.5 218 73.4
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 1.5e-91 340.1 215 74.9
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 2.0e-91 339.7 249 66.7
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 2.0e-91 339.7 245 69.4
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 3.3e-91 339.0 199 78.9
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 4.3e-91 338.6 204 76.5
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 4.3e-91 338.6 201 79.1
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 4.3e-91 338.6 200 78.0
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.7e-90 336.7 197 79.7
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 2.2e-90 336.3 198 79.3
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 2.8e-90 335.9 258 66.3
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 3.7e-90 335.5 235 68.5
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 8.2e-90 334.3 213 76.1
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 8.2e-90 334.3 202 76.7
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 1.1e-89 334.0 197 78.7
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 1.4e-89 333.6 197 76.6
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 1.4e-89 333.6 223 71.7
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 4.1e-89 332.0 212 74.1
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 5.3e-89 331.6 245 66.9
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 5.3e-89 331.6 243 66.3
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 1.5e-88 330.1 198 79.3
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 2.0e-88 329.7 199 76.9
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 2.6e-88 329.3 198 77.8
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 2.2e-87 326.2 198 78.8
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 2.9e-87 325.9 198 78.8
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 2.9e-87 325.9 198 78.8
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 8.5e-87 324.3 202 75.2
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 1.1e-86 323.9 212 75.5
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 1.4e-86 323.6 203 74.4
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 2.3e-84 316.2 230 67.4
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 6.7e-84 314.7 215 71.6
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 8.8e-84 314.3 192 77.1
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 1.5e-83 313.5 198 75.3
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 7.4e-83 311.2 264 61.7
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 1.3e-82 310.5 228 67.1
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 4.8e-82 308.5 197 70.6
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 1.4e-81 307.0 193 74.6
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 1.4e-81 307.0 203 70.4
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 3.5e-80 302.4 247 60.3
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 5.9e-80 301.6 194 71.6
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.1e-75 287.3 239 61.5
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 2.2e-74 283.1 251 57.8
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 2.8e-74 282.7 175 76.0
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 8.2e-74 281.2 247 59.9
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 3.1e-73 279.3 247 59.1
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 1.6e-72 276.9 168 75.6
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 4.2e-70 268.9 187 67.4
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 7.2e-70 268.1 171 73.1
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 8.0e-69 264.6 163 75.5
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 6.8e-68 261.5 183 70.5
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 1.2e-67 260.8 291 50.2
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.7e-66 256.9 277 49.8
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.7e-58 230.3 159 71.1
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 5.0e-55 218.8 123 82.1
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 2.4e-49 199.9 122 75.4
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 5.4e-49 198.7 184 58.7
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 7.0e-49 198.4 211 52.6
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 1.3e-47 194.1 123 73.2
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 6.6e-47 191.8 121 74.4
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 6.1e-45 185.3 130 69.2
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 2.0e-43 180.3 236 46.6
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 1.1e-41 174.5 103 75.7
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 5.6e-38 162.2 449 30.1
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 1.4e-33 147.5 224 42.4
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 5.4e-33 145.6 98 71.4
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 8.1e-29 131.7 78 75.6
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 2.2e-26 123.6 74 77.0
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 6.4e-26 122.1 72 75.0
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.5e-14 84.3 96 45.8
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 8.7e-07 58.5 37 73.0


User provided reference genes

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