Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 4.5e-200 701.0 350 100.0
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 8.1e-194 680.2 393 89.1
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 4.2e-190 667.9 351 95.4
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 5.5e-190 667.5 352 95.7
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 4.9e-183 644.4 355 91.3
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 1.9e-179 632.5 350 91.4
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 9.7e-179 630.2 360 85.8
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 1.8e-177 625.9 361 85.3
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 1.8e-177 625.9 360 85.8
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 1.2e-176 623.2 361 85.0
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 6.5e-175 617.5 360 85.3
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 4.1e-169 598.2 360 81.4
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 7.9e-165 583.9 363 79.6
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 8.5e-159 563.9 355 77.5
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 1.1e-155 553.5 352 77.3
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 1.8e-153 546.2 350 74.0
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 9.1e-153 543.9 350 72.6
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 7.7e-152 540.8 355 73.0
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 7.7e-152 540.8 356 75.3
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.7e-151 539.7 350 73.4
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 3.8e-151 538.5 361 73.1
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 1.1e-150 537.0 353 74.5
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 5.5e-150 534.6 350 72.0
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 7.2e-150 534.3 353 73.4
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 7.2e-150 534.3 350 73.1
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 9.4e-150 533.9 350 72.6
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 9.4e-150 533.9 350 72.9
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 2.1e-149 532.7 359 70.8
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 2.7e-149 532.3 350 71.7
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 4.7e-149 531.6 353 72.5
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 6.1e-149 531.2 360 72.5
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 1.4e-148 530.0 351 73.2
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.8e-148 529.6 360 72.2
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 2.3e-148 529.3 353 72.5
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 3.0e-148 528.9 354 71.2
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 3.0e-148 528.9 355 70.7
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 5.2e-148 528.1 351 72.9
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 2.6e-147 525.8 351 71.8
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 2.6e-147 525.8 350 71.4
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 3.3e-147 525.4 351 72.1
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 4.4e-147 525.0 352 70.5
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 1.3e-146 523.5 365 70.1
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 1.7e-146 523.1 350 72.9
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 2.8e-146 522.3 353 71.4
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 3.7e-146 521.9 355 70.1
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 3.7e-146 521.9 358 70.4
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 4.8e-146 521.5 355 70.7
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 4.8e-146 521.5 355 70.7
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 6.3e-146 521.2 353 71.1
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 8.2e-146 520.8 356 71.3
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 1.1e-145 520.4 356 71.3
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 4.1e-145 518.5 354 70.1
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 5.3e-145 518.1 353 70.5
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 5.3e-145 518.1 355 71.0
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 5.3e-145 518.1 354 69.8
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 7.0e-145 517.7 365 70.7
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 1.2e-144 516.9 352 71.3
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.2e-144 516.9 350 72.6
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 3.5e-144 515.4 351 69.5
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 3.5e-144 515.4 356 69.1
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 7.7e-144 514.2 353 70.0
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 1.0e-143 513.8 356 69.4
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 1.3e-143 513.5 352 71.3
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.7e-143 513.1 353 69.4
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 5.0e-143 511.5 351 68.9
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 1.5e-142 510.0 353 70.3
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 1.5e-142 510.0 353 69.7
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.5e-142 509.2 350 68.6
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 3.2e-142 508.8 351 69.2
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 4.2e-142 508.4 352 70.2
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 4.2e-142 508.4 356 68.8
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.5e-142 508.1 359 68.2
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 5.5e-142 508.1 350 68.9
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 7.2e-142 507.7 351 70.7
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 9.4e-142 507.3 350 69.4
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 9.4e-142 507.3 356 70.2
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.2e-141 506.9 350 68.6
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 1.2e-141 506.9 355 68.7
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 1.6e-141 506.5 350 69.7
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 2.1e-141 506.1 353 68.0
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 2.7e-141 505.8 350 69.1
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 4.7e-141 505.0 350 70.0
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 6.1e-141 504.6 344 70.1
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 6.1e-141 504.6 354 67.8
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 6.1e-141 504.6 354 69.2
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 8.0e-141 504.2 351 69.2
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 8.0e-141 504.2 350 70.3
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 1.8e-140 503.1 350 69.4
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 5.2e-140 501.5 360 66.4
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 5.2e-140 501.5 353 68.3
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 6.8e-140 501.1 360 67.8
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.2e-139 500.4 360 66.4
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 2.0e-139 499.6 357 67.8
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 2.0e-139 499.6 355 69.9
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 2.6e-139 499.2 350 67.1
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 2.6e-139 499.2 353 68.0
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 4.4e-139 498.4 350 67.7
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 7.5e-139 497.7 351 68.7
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 1.3e-138 496.9 353 69.1
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 1.7e-138 496.5 355 67.6
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 1.7e-138 496.5 357 67.8
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 1.1e-137 493.8 355 67.0
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 1.1e-137 493.8 358 67.0
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 1.8e-137 493.0 355 67.9
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 7.0e-137 491.1 350 66.0
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 2.0e-136 489.6 361 64.5
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 2.0e-136 489.6 356 66.3
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 2.7e-136 489.2 364 66.2
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 5.9e-136 488.0 352 65.9
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 1.3e-135 486.9 357 66.9
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 1.7e-135 486.5 359 66.9
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 1.5e-134 483.4 355 66.8
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 7.2e-134 481.1 355 67.3
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 4.7e-133 478.4 351 67.0
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 6.1e-133 478.0 336 67.9
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 8.0e-133 477.6 352 67.9
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 1.8e-132 476.5 353 65.2
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 5.2e-132 474.9 355 67.0
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 5.6e-126 454.9 335 66.9
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 5.6e-126 454.9 351 63.0
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 1.6e-125 453.4 352 61.6
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 2.2e-122 443.0 359 60.2
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 1.1e-121 440.7 364 59.3
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 7.0e-121 438.0 362 60.5
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 1.2e-120 437.2 360 59.4
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 1.2e-120 437.2 354 59.9
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 6.0e-120 434.9 356 59.8
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 8.6e-119 431.0 353 60.1
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 1.9e-118 429.9 350 60.0
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 3.2e-113 412.5 295 68.1
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 7.0e-113 411.4 303 66.3
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.0e-111 407.5 287 69.0
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.0e-103 380.9 351 56.4
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.6e-101 373.6 331 58.9
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 2.1e-101 373.2 350 55.4
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 2.6e-99 366.3 293 60.8
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 3.5e-96 355.9 273 64.8
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 6.2e-85 318.5 248 72.6
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.4e-76 290.8 218 68.8
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 2.7e-72 276.6 355 43.7
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 5.8e-67 258.8 274 51.5
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 3.0e-63 246.5 355 41.4
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 5.1e-63 245.7 156 73.7
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 3.1e-60 236.5 179 67.6
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 2.7e-56 223.4 356 35.4
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.4e-52 211.1 115 82.6
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 9.1e-52 208.4 126 77.8
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 4.5e-51 206.1 161 64.6
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.2e-33 146.4 85 72.9
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 7.2e-33 145.6 197 44.7
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 9.4e-33 145.2 85 72.9
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.1e-32 144.1 85 71.8
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.2e-30 138.3 85 69.4
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 2.8e-29 133.7 131 52.7
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 9.1e-28 128.6 106 60.4
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 2.0e-27 127.5 185 41.6
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 6.5e-26 122.5 139 44.6
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 1.5e-25 121.3 189 42.3
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.4e-22 109.8 58 87.9
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 1.3e-21 108.2 63 74.6
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 6.3e-21 105.9 59 78.0
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 6.3e-21 105.9 59 78.0
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 2.9e-18 97.1 153 37.3
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.9e-18 97.1 60 75.0
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 5.0e-18 96.3 66 66.7
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 8.6e-18 95.5 59 72.9
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 1.1e-17 95.1 75 58.7
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 1.9e-17 94.4 49 85.7
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 5.5e-17 92.8 55 78.2
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.0e-15 86.7 40 85.0
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 6.3e-13 79.3 149 32.2
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 1.8e-12 77.8 67 59.7
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.7e-11 73.9 177 33.3
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 5.0e-10 69.7 50 62.0
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 3.6e-08 63.5 64 46.9
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 8.0e-08 62.4 87 40.2
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.0e-07 62.0 83 41.0
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 6.8e-07 59.3 174 28.2
arahy.Tifrunner.gnm1.ann1.5I9U23 Arachis hypogaea HOM05D003641 ORTHO05D085625 1.2e-06 58.5 116 37.1
Sopen02g001110 Solanum pennellii HOM05D003641 ORTHO05D004915 5.8e-06 56.2 98 43.9


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