Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 1.6e-92 342.8 179 100.0
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 2.7e-92 342.0 179 99.4
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 2.1e-89 332.4 179 97.8
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 1.1e-88 330.1 179 95.5
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 8.4e-86 320.5 181 93.9
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 6.0e-76 287.7 188 81.4
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 1.9e-74 282.7 185 81.6
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 8.1e-73 277.3 196 80.6
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 8.1e-73 277.3 196 80.6
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 2.4e-72 275.8 183 80.9
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 5.3e-72 274.6 188 79.8
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 1.2e-71 273.5 187 77.5
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 9.9e-71 270.4 188 77.1
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 1.0e-62 243.8 187 71.1
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 3.3e-58 228.8 183 67.8
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 3.8e-54 215.3 186 65.1
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 5.0e-54 214.9 183 63.9
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 1.1e-48 197.2 168 59.5
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 1.4e-48 196.8 182 55.5
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 6.9e-48 194.5 167 58.7
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 1.5e-47 193.4 169 63.3
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 2.6e-47 192.6 170 57.6
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 4.5e-47 191.8 170 57.6
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 5.9e-47 191.4 185 58.9
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 1.7e-46 189.9 182 58.2
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 2.2e-46 189.5 183 55.7
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 3.8e-46 188.7 166 60.2
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 1.1e-45 187.2 173 58.4
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.4e-45 186.8 174 59.8
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.5e-45 186.0 174 59.8
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 2.5e-45 186.0 174 58.0
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 3.2e-45 185.7 174 59.8
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 3.2e-45 185.7 182 57.7
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 7.2e-45 184.5 139 67.6
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 1.6e-44 183.3 140 65.7
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 1.6e-44 183.3 170 56.5
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 2.1e-44 183.0 189 56.6
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 4.6e-44 181.8 185 55.1
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 6.1e-44 181.4 173 57.8
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 1.0e-43 180.6 181 53.6
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 1.0e-43 180.6 184 56.5
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 1.8e-43 179.9 161 58.4
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 3.0e-43 179.1 169 55.6
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 5.1e-43 178.3 179 54.2
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 5.1e-43 178.3 170 57.6
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 5.1e-43 178.3 128 68.8
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 5.1e-43 178.3 193 56.0
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 8.8e-43 177.6 188 55.9
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 8.8e-43 177.6 188 55.9
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 1.5e-42 176.8 183 56.8
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 2.0e-42 176.4 171 56.7
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 2.0e-42 176.4 174 57.5
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 2.0e-42 176.4 182 56.6
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 3.3e-42 175.6 172 54.7
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 3.3e-42 175.6 188 50.5
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 4.3e-42 175.3 135 64.4
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 5.7e-42 174.9 159 57.9
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 9.7e-42 174.1 177 57.6
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 2.2e-41 172.9 173 57.8
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 2.2e-41 172.9 169 56.8
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 2.8e-41 172.6 156 56.4
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 3.7e-41 172.2 171 58.5
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 3.7e-41 172.2 155 61.3
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 6.3e-41 171.4 129 64.3
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 1.4e-40 170.2 180 53.9
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 1.8e-40 169.9 183 53.0
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 2.4e-40 169.5 189 51.3
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 3.1e-40 169.1 178 51.7
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 5.3e-40 168.3 176 52.8
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 6.9e-40 167.9 154 59.7
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 9.1e-40 167.5 150 60.7
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 9.1e-40 167.5 167 57.5
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.2e-39 167.2 163 56.4
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 2.0e-39 166.4 190 51.1
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 2.0e-39 166.4 181 53.6
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 2.6e-39 166.0 130 63.8
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 3.4e-39 165.6 175 53.7
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 3.4e-39 165.6 174 54.6
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 3.4e-39 165.6 188 51.6
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 1.4e-37 160.2 121 66.9
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 1.4e-37 160.2 182 52.2
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 1.9e-37 159.8 171 55.0
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 1.6e-36 156.8 146 58.2
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.7e-36 156.0 166 54.8
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 3.6e-36 155.6 189 47.1
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 4.7e-36 155.2 116 66.4
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 2.3e-35 152.9 152 52.6
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 3.0e-35 152.5 182 52.2
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 1.3e-33 147.1 169 50.9
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 2.2e-33 146.4 187 48.7
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 8.2e-33 144.4 159 50.9
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 7.0e-32 141.4 137 53.3
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 1.0e-30 137.5 126 56.3
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 1.1e-29 134.0 134 57.5
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 2.5e-29 132.9 90 70.0
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 4.2e-29 132.1 109 60.6
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 1.6e-28 130.2 88 68.2
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 2.1e-28 129.8 135 51.9
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 2.3e-27 126.3 171 46.2
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 9.1e-24 114.4 152 50.7
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 1.7e-22 110.2 132 47.0
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 2.2e-22 109.8 174 42.5
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 2.5e-21 106.3 114 57.0
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 3.2e-21 105.9 174 44.8
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 1.6e-20 103.6 131 51.9
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 5.2e-19 98.6 73 63.0
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 1.6e-15 87.0 127 49.6
Lsat_1_v5_gn_7_115640 Lactuca sativa HOM05D018034 ORTHO05D006583 2.3e-06 56.6 104 40.4


User provided reference genes

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