Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g29267 Brassica carinata HOM05D004659 ORTHO05D005547 4.0e-93 344.7 171 100.0
C05p55460 Brassica napus HOM05D004659 ORTHO05D005547 4.0e-93 344.7 171 100.0
BolC5t34212H Brassica oleracea HOM05D004659 ORTHO05D005547 4.0e-93 344.7 171 100.0
A05p37030 Brassica napus HOM05D004659 ORTHO05D005547 2.6e-92 342.0 171 98.8
BraA05t22500Z Brassica rapa HOM05D004659 ORTHO05D005547 9.7e-92 340.1 171 98.2
C01p52890 Brassica napus HOM05D004659 ORTHO05D005547 9.1e-90 333.6 171 95.3
BolC1t05226H Brassica oleracea HOM05D004659 ORTHO05D005547 2.7e-89 332.0 171 94.7
Thhalv10022434m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 7.7e-89 330.5 169 94.1
Sp3g10560 Schrenkiella parvula HOM05D004659 ORTHO05D005547 3.8e-88 328.2 169 92.9
BcaC09g48234 Brassica carinata HOM05D004659 ORTHO05D005547 2.3e-85 318.9 169 92.3
AL3G24020 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 4.0e-85 318.2 171 88.3
CARHR086910 Cardamine hirsuta HOM05D004659 ORTHO05D005547 4.4e-84 314.7 169 88.8
AT3G12370 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 7.5e-84 313.9 172 88.4
Carub.0003s1173 Capsella rubella HOM05D004659 ORTHO05D005547 4.1e-82 308.1 171 86.0
Aa31sc153G80 Aethionema arabicum HOM05D004659 ORTHO05D005547 2.4e-74 282.3 167 79.0
AL6G24130 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 4.9e-51 204.9 147 65.3
AT5G13510 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 3.2e-50 202.2 147 63.9
CARHR199930 Cardamine hirsuta HOM05D004659 ORTHO05D005547 4.1e-50 201.8 147 63.3
THA.LOC104827313 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 4.1e-50 201.8 147 63.9
Carub.0006s1167 Capsella rubella HOM05D004659 ORTHO05D005547 1.3e-48 196.8 142 64.1
THA.LOC104799364 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 1.3e-48 196.8 147 61.9
BcaC04g19111 Brassica carinata HOM05D004659 ORTHO05D005547 2.3e-48 196.1 143 63.6
BolC9t59202H Brassica oleracea HOM05D004659 ORTHO05D005547 2.3e-48 196.1 143 63.6
Sp6g30510 Schrenkiella parvula HOM05D004659 ORTHO05D005547 2.3e-48 196.1 142 64.1
BraA02t05172Z Brassica rapa HOM05D004659 ORTHO05D005547 3.0e-48 195.7 142 64.1
Atru.chr12.612 Acer truncatum HOM05D004659 ORTHO05D005547 6.6e-48 194.5 147 62.6
Aa31sc127G30 Aethionema arabicum HOM05D004659 ORTHO05D005547 6.6e-48 194.5 147 60.5
BcaNung01889 Brassica carinata HOM05D004659 ORTHO05D005547 6.6e-48 194.5 142 63.4
A10p24760 Brassica napus HOM05D004659 ORTHO05D005547 6.6e-48 194.5 142 63.4
C02p06210 Brassica napus HOM05D004659 ORTHO05D005547 6.6e-48 194.5 142 63.4
C09p63590 Brassica napus HOM05D004659 ORTHO05D005547 6.6e-48 194.5 142 63.4
BraA10t44539Z Brassica rapa HOM05D004659 ORTHO05D005547 6.6e-48 194.5 142 63.4
BolC2t06562H Brassica oleracea HOM05D004659 ORTHO05D005547 1.5e-47 193.4 142 62.7
BcaNung01147 Brassica carinata HOM05D004659 ORTHO05D005547 5.6e-47 191.4 142 62.7
PGR031G1734 Punica granatum HOM05D004659 ORTHO05D005547 5.6e-47 191.4 147 59.9
Thhalv10014625m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 9.6e-47 190.7 142 61.3
CiPaw.02G177400 Carya illinoinensis HOM05D004659 ORTHO05D005547 2.8e-46 189.1 147 59.9
Oeu017240.1 Olea europaea HOM05D004659 ORTHO05D005547 2.8e-46 189.1 149 59.1
Peaxi162Scf00195g00083 Petunia axillaris HOM05D004659 ORTHO05D005547 3.6e-46 188.7 147 59.9
Actinidia03015 Actinidia chinensis HOM05D004659 ORTHO05D005547 4.7e-46 188.3 147 59.9
Nitab4.5_0004104g0080 Nicotiana tabacum HOM05D004659 ORTHO05D005547 4.7e-46 188.3 147 59.2
vmacro04881 Vaccinium macrocarpon HOM05D004659 ORTHO05D005547 4.7e-46 188.3 147 58.5
arahy.Tifrunner.gnm1.ann1.23T474 Arachis hypogaea HOM05D004659 ORTHO05D005547 8.1e-46 187.6 147 59.2
Nitab4.5_0000691g0220 Nicotiana tabacum HOM05D004659 ORTHO05D005547 1.8e-45 186.4 147 58.5
SalBow4G3080 Salvia bowleyana HOM05D004659 ORTHO05D005547 2.4e-45 186.0 149 58.4
Lj1P926T21 Lonicera japonica HOM05D004659 ORTHO05D005547 4.0e-45 185.3 147 58.5
VMungo0464G0639 Vigna mungo HOM05D004659 ORTHO05D005547 4.0e-45 185.3 144 59.7
Phvul.004G002100 Phaseolus vulgaris HOM05D004659 ORTHO05D005547 5.2e-45 184.9 144 59.7
Ciclev10032705m.g Citrus clementina HOM05D004659 ORTHO05D005547 6.8e-45 184.5 140 60.7
Hma1.2p1_2685F.1_g326920 Hydrangea macrophylla HOM05D004659 ORTHO05D005547 6.8e-45 184.5 147 59.2
Rhsim03G0135900 Rhododendron simsii HOM05D004659 ORTHO05D005547 6.8e-45 184.5 147 57.8
CAN.G186.30 Capsicum annuum HOM05D004659 ORTHO05D005547 2.0e-44 183.0 147 57.1
Ca_21106_v3 Cicer arietinum L. HOM05D004659 ORTHO05D005547 2.0e-44 183.0 144 58.3
Medtr4g131540 Medicago truncatula HOM05D004659 ORTHO05D005547 2.6e-44 182.6 147 57.8
Solyc04g009540.1 Solanum lycopersicum HOM05D004659 ORTHO05D005547 4.4e-44 181.8 147 57.1
Sopen04g004700 Solanum pennellii HOM05D004659 ORTHO05D005547 4.4e-44 181.8 147 57.1
Potri.010G215900 Populus trichocarpa HOM05D004659 ORTHO05D005547 5.8e-44 181.4 147 59.2
CSS0038055 Camellia sinensis var. sinensis HOM05D004659 ORTHO05D005547 9.9e-44 180.6 147 55.8
Sabra10G0166900 Salix brachista HOM05D004659 ORTHO05D005547 1.3e-43 180.3 147 59.2
PGSC0003DMG400032570 Solanum tuberosum HOM05D004659 ORTHO05D005547 1.3e-43 180.3 147 56.5
MSTRG.9197 Avicennia marina HOM05D004659 ORTHO05D005547 1.7e-43 179.9 149 57.7
ClCG02G013790 Citrullus lanatus HOM05D004659 ORTHO05D005547 2.2e-43 179.5 142 60.6
Sc09g0006840 Simmondsia chinensis HOM05D004659 ORTHO05D005547 2.2e-43 179.5 144 56.9
Gohir.A05G298900 Gossypium hirsutum HOM05D004659 ORTHO05D005547 2.9e-43 179.1 147 57.8
Manes.07G069200 Manihot esculenta HOM05D004659 ORTHO05D005547 2.9e-43 179.1 140 60.7
Gohir.D05G298600 Gossypium hirsutum HOM05D004659 ORTHO05D005547 3.8e-43 178.7 147 57.8
Gorai.009G315800 Gossypium raimondii HOM05D004659 ORTHO05D005547 3.8e-43 178.7 147 57.8
CDE02G4355 Ceratophyllum demersum HOM05D002697 ORTHO05D005547 4.9e-43 178.3 140 58.6
Psat4g007600 Pisum sativum HOM05D004659 ORTHO05D005547 6.4e-43 177.9 144 56.9
Cfa013817 Carpinus fangiana HOM05D004659 ORTHO05D005547 8.4e-43 177.6 139 59.0
MD10G1183400 Malus domestica HOM05D004659 ORTHO05D005547 8.4e-43 177.6 139 59.0
Potri.008G045800 Populus trichocarpa HOM05D004659 ORTHO05D005547 8.4e-43 177.6 147 57.8
Sabra08G0032100 Salix brachista HOM05D004659 ORTHO05D005547 8.4e-43 177.6 147 59.2
CDE09G1094 Ceratophyllum demersum HOM05D004659 ORTHO05D005547 1.1e-42 177.2 139 59.0
Haze_22491 Corylus avellana HOM05D004659 ORTHO05D005547 1.1e-42 177.2 139 59.7
Prupe.8G222500 Prunus persica HOM05D004659 ORTHO05D005547 1.1e-42 177.2 135 60.7
TWI38G0010 Tripterygium wilfordii HOM05D004659 ORTHO05D005547 1.1e-42 177.2 140 59.3
TAR369G1054 Trochodendron aralioides HOM05D004659 ORTHO05D005547 1.4e-42 176.8 135 62.2
MD05G1196100 Malus domestica HOM05D004659 ORTHO05D005547 1.9e-42 176.4 139 59.0
SGA_v2.0_scaffold62G21448 Striga asiatica HOM05D004659 ORTHO05D005547 1.9e-42 176.4 149 56.4
Cpa.g.sc1.279 Carica papaya HOM05D004659 ORTHO05D005547 2.4e-42 176.0 140 59.3
CsaV3_5G006380 Cucumis sativus L. HOM05D004659 ORTHO05D005547 4.2e-42 175.3 140 60.0
Aqoxy4G03156 Aquilegia oxysepala HOM05D004659 ORTHO05D005547 5.4e-42 174.9 142 57.7
ECA232G1287 Erigeron canadensis HOM05D004659 ORTHO05D005547 5.4e-42 174.9 140 57.9
MELO3C011720.2 Cucumis melo HOM05D004659 ORTHO05D005547 7.1e-42 174.5 140 59.3
MBI05_g34749_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 7.1e-42 174.5 141 57.4
PSO339G6228 Papaver somniferum HOM05D004659 ORTHO05D005547 7.1e-42 174.5 135 60.0
PSO384G3929 Papaver somniferum HOM05D004659 ORTHO05D005547 7.1e-42 174.5 135 60.0
CANSAT35G1484 Cannabis sativa HOM05D004659 ORTHO05D005547 1.2e-41 173.7 141 58.2
RcHm_v2.0_Chr6g0287931 Rosa chinensis HOM05D004659 ORTHO05D005547 1.2e-41 173.7 139 57.6
AUR62027894 Chenopodium quinoa HOM05D004659 ORTHO05D005547 2.1e-41 172.9 145 55.9
HanXRQChr09g0247171 Helianthus annuus HOM05D004659 ORTHO05D005547 2.7e-41 172.6 140 56.4
Nn2g10610 Nelumbo nucifera HOM05D004659 ORTHO05D005547 3.5e-41 172.2 132 61.4
AUR62036014 Chenopodium quinoa HOM05D004659 ORTHO05D005547 4.6e-41 171.8 145 55.2
Lj4g0017760 Lotus japonicus HOM05D004659 ORTHO05D005547 4.6e-41 171.8 138 57.2
Ah.10g033100 Amaranthus hybridus HOM05D004659 ORTHO05D005547 6.0e-41 171.4 140 57.1
Cc09_g02380 Coffea canephora HOM05D004659 ORTHO05D005547 6.0e-41 171.4 135 59.3
Glyma.17G075900 Glycine max HOM05D004659 ORTHO05D005547 6.0e-41 171.4 132 59.8
Sed0009994 Sechium edule HOM05D004659 ORTHO05D005547 6.0e-41 171.4 139 58.3
SMO239G0117 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 7.8e-41 171.0 137 59.1
SMO001G0016 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 1.0e-40 170.6 148 56.8
Lsat_1_v5_gn_9_66541 Lactuca sativa HOM05D004659 ORTHO05D005547 1.3e-40 170.2 140 57.1
FvH4_2g21340 Fragaria vesca HOM05D004659 ORTHO05D005547 1.7e-40 169.9 139 56.8
FAN24G1009 Fragaria x ananassa HOM05D004659 ORTHO05D005547 1.7e-40 169.9 139 56.8
Nn8g38769 Nelumbo nucifera HOM05D004659 ORTHO05D005547 1.7e-40 169.9 135 60.0
Os03g0284400 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 3.0e-40 169.1 140 58.6
Lalb_Chr07g0179691 Lupinus albus HOM05D004659 ORTHO05D005547 3.9e-40 168.7 132 58.3
COL.COLO4_23776 Corchorus olitorius HOM05D004659 ORTHO05D005547 8.7e-40 167.5 139 57.6
DCAR_019149 Daucus carota HOM05D004659 ORTHO05D005547 8.7e-40 167.5 143 55.9
QL08p057255 Quercus lobata HOM05D004659 ORTHO05D005547 1.1e-39 167.2 140 56.4
unitig_46.g18586 Utricularia gibba HOM05D004659 ORTHO05D005547 1.5e-39 166.8 142 55.6
Zm00001eb397230 Zea mays HOM05D004659 ORTHO05D005547 1.9e-39 166.4 138 58.7
Thecc.10G065300 Theobroma cacao HOM05D004659 ORTHO05D005547 4.3e-39 165.2 140 56.4
Zm00001eb013020 Zea mays HOM05D004659 ORTHO05D005547 4.3e-39 165.2 138 58.0
ATR0594G228 Amborella trichopoda HOM05D004659 ORTHO05D005547 2.8e-38 162.5 136 52.9
Duzib106G0066 Durio zibethinus HOM05D004659 ORTHO05D005547 2.4e-37 159.5 140 54.3
Mapoly0115s0051 Marchantia polymorpha HOM05D004659 ORTHO05D005547 3.1e-37 159.1 144 52.8
Pp3c2_35950 Physcomitrium patens HOM05D004659 ORTHO05D005547 6.9e-37 157.9 142 51.4
AagrBONN_evm.TU.Sc2ySwM_228.2422 Anthoceros agrestis HOM05D004659 ORTHO05D005547 1.2e-36 157.1 132 54.5
TPR.G37110 Trifolium pratense HOM05D004659 ORTHO05D005547 4.9e-35 151.8 115 58.3
Pp3c1_1330 Physcomitrium patens HOM05D004659 ORTHO05D005547 8.4e-35 151.0 140 50.7
Dinv31375 Davidia involucrata HOM05D004659 ORTHO05D005547 3.2e-34 149.1 107 68.2
Lalb_Chr13g0301081 Lupinus albus HOM05D004659 ORTHO05D005547 4.6e-33 145.2 132 53.8
HPP92_012064 Vanilla planifolia HOM05D004659 ORTHO05D005547 2.1e-30 136.3 170 42.4
SMO306G0014 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 1.8e-29 133.3 110 62.7
Zm00001eb355270 Zea mays HOM05D004659 ORTHO05D005547 6.9e-29 131.3 164 40.9
Os05g0121500 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 6.4e-27 124.8 161 40.4
CBR_g32465 Chara braunii HOM05D004659 ORTHO05D005547 4.6e-25 118.6 150 41.3
A02p02000 Brassica napus HOM05D004659 ORTHO05D005547 1.9e-23 113.2 81 60.5
Sc01g0005590 Simmondsia chinensis HOM05D004659 ORTHO05D005547 6.9e-21 104.8 143 39.9
Sc26g0002120 Simmondsia chinensis HOM05D004659 ORTHO05D005547 1.0e-19 100.9 155 36.8
Hund23274 Selenicereus undatus HOM05D004659 ORTHO05D005547 1.7e-19 100.1 163 35.0
Sc01g0009170 Simmondsia chinensis HOM05D004659 ORTHO05D005547 3.8e-19 99.0 142 40.1
BcaB01g05353 Brassica carinata HOM05D004659 ORTHO05D005547 1.1e-18 97.4 111 48.6
Glyma.13G155300 Glycine max HOM05D004659 ORTHO05D005547 1.9e-18 96.7 79 53.2
Ah.09g233850 Amaranthus hybridus HOM05D004659 ORTHO05D005547 7.9e-17 91.3 153 33.3
EL10Ac6g15306 Beta vulgaris HOM05D004659 ORTHO05D005547 8.7e-16 87.8 163 33.1
Haze_16952 Corylus avellana HOM05D004659 ORTHO05D005547 1.9e-15 86.7 159 35.2
PRCOL_00005567 Prasinoderma coloniale HOM05D004659 ORTHO05D005547 2.5e-15 86.3 133 32.3
AUR62043493 Chenopodium quinoa HOM05D004659 ORTHO05D005547 1.5e-12 77.0 116 37.9
Rhsim07G0202500 Rhododendron simsii HOM05D004659 ORTHO05D005547 1.5e-12 77.0 65 60.0
Zm00001eb342870 Zea mays HOM05D004659 ORTHO05D005547 3.4e-12 75.9 71 46.5
Pp3c11_2850 Physcomitrium patens HOM05D004659 ORTHO05D005547 1.0e-11 74.3 67 53.7
MD17G1117700 Malus domestica HOM05D004659 ORTHO05D005547 7.1e-10 68.2 69 47.8
Cfa001576 Carpinus fangiana HOM05D004659 ORTHO05D005547 9.3e-10 67.8 63 50.8
MBI05_g35481_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 8.2e-06 54.7 86 36.0


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