Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p54830 Brassica napus HOM05D008776 ORTHO05D005587 1.2e-92 343.2 175 100.0
C04p04170 Brassica napus HOM05D008776 ORTHO05D005587 5.0e-91 337.8 175 98.9
BolC4t22056H Brassica oleracea HOM05D008776 ORTHO05D005587 5.0e-91 337.8 175 98.9
BolC5t29828H Brassica oleracea HOM05D008776 ORTHO05D005587 1.1e-90 336.7 175 98.3
C01p32810 Brassica napus HOM05D008776 ORTHO05D005587 5.1e-88 327.8 175 96.6
BcaC09g49800 Brassica carinata HOM05D008776 ORTHO05D005587 1.8e-72 276.2 182 83.5
BcaC05g25214 Brassica carinata HOM05D008776 ORTHO05D005587 1.8e-61 239.6 122 98.4
BcaC05g29210 Brassica carinata HOM05D008776 ORTHO05D005587 9.1e-61 237.3 121 97.5
BcaB08g34642 Brassica carinata HOM05D008776 ORTHO05D005587 1.0e-48 197.2 132 84.1
BraA03t13706Z Brassica rapa HOM05D008776 ORTHO05D005587 5.6e-42 174.9 140 73.6
A03p45740 Brassica napus HOM05D008776 ORTHO05D005587 2.1e-41 172.9 142 73.2
BcaC01g03031 Brassica carinata HOM05D008776 ORTHO05D005587 1.0e-40 170.6 141 72.3
C03p56950 Brassica napus HOM05D008776 ORTHO05D005587 1.0e-40 170.6 141 72.3
BolC3t17973H Brassica oleracea HOM05D008776 ORTHO05D005587 1.0e-40 170.6 141 72.3
Sp3g29580 Schrenkiella parvula HOM05D008776 ORTHO05D005587 2.9e-38 162.5 136 69.1
BcaB03g16349 Brassica carinata HOM05D008776 ORTHO05D005587 1.4e-37 160.2 147 63.3
CARHR106560 Cardamine hirsuta HOM05D008776 ORTHO05D005587 2.0e-36 156.4 138 64.5
BcaC06g36144 Brassica carinata HOM05D008776 ORTHO05D005587 1.3e-35 153.7 147 61.2
BolC7t41148H Brassica oleracea HOM05D008776 ORTHO05D005587 1.3e-35 153.7 147 61.2
C07p07280 Brassica napus HOM05D008776 ORTHO05D005587 5.0e-35 151.8 138 63.8
BolC1t03218H Brassica oleracea HOM05D008776 ORTHO05D005587 8.6e-35 151.0 75 97.3
A07p04560 Brassica napus HOM05D008776 ORTHO05D005587 1.6e-33 146.7 144 61.8
BraA07t28245Z Brassica rapa HOM05D008776 ORTHO05D005587 1.6e-33 146.7 144 61.8
AT2G16365 Arabidopsis thaliana HOM05D008776 ORTHO05D005587 2.1e-33 146.4 149 61.7
AL3G52490 Arabidopsis lyrata HOM05D008776 ORTHO05D005587 6.2e-33 144.8 149 61.7
Thhalv10022682m.g Eutrema salsugineum HOM05D008776 ORTHO05D005587 1.0e-32 144.1 145 60.0
Carub.0003s3009 Capsella rubella HOM05D008776 ORTHO05D005587 6.0e-28 128.3 144 59.7
Aa31LG8G13740 Aethionema arabicum HOM05D008776 ORTHO05D005587 3.3e-26 122.5 114 63.2
C09p31770 Brassica napus HOM05D008776 ORTHO05D042895 4.4e-15 85.5 117 45.3
BolC9t56034H Brassica oleracea HOM05D008776 ORTHO05D042895 4.4e-15 85.5 117 45.3
THA.LOC104804555 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 4.4e-15 85.5 188 37.8
THA.LOC104807308 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 3.5e-12 75.9 188 36.2
C03p78480 Brassica napus HOM05D032251 ORTHO05D097000 6.6e-11 71.6 42 85.7
BolC1t03288H Brassica oleracea HOM05D032251 ORTHO05D042368 6.6e-11 71.6 42 85.7
C05p21110 Brassica napus HOM05D032251 ORTHO05D042368 1.6e-09 67.0 43 83.7
BraA08t35093Z Brassica rapa HOM05D000048 ORTHO05D000207 2.1e-09 66.6 56 67.9
A08p31710 Brassica napus HOM05D000048 ORTHO05D000207 1.4e-08 63.9 56 66.1
BcaB03g13073 Brassica carinata HOM05D000048 ORTHO05D000207 2.9e-06 56.2 56 60.7
BcaC07g38771 Brassica carinata HOM05D000048 ORTHO05D000207 3.8e-06 55.8 56 62.5
C08p17040 Brassica napus HOM05D000048 ORTHO05D000207 3.8e-06 55.8 56 62.5
Sp1g13490 Schrenkiella parvula HOM05D000048 ORTHO05D000207 6.4e-06 55.1 56 58.9


User provided reference genes

Program Settings