Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p54370 Brassica napus HOM05D003728 ORTHO05D000007 9.2e-110 400.2 199 100.0
A04p02300 Brassica napus HOM05D000003 ORTHO05D000283 3.5e-93 345.1 236 78.4
BcaNung06235 Brassica carinata HOM05D003728 ORTHO05D000006 6.6e-92 340.9 197 88.8
BolC5t33175H Brassica oleracea HOM05D003728 ORTHO05D000006 6.5e-55 218.0 243 57.6
C03p57290 Brassica napus HOM05D003728 ORTHO05D000007 2.2e-31 139.8 269 38.7
BolC3t18007H Brassica oleracea HOM05D003728 ORTHO05D000007 2.9e-31 139.4 214 43.0
BcaC03g16596 Brassica carinata HOM05D003728 ORTHO05D000007 1.5e-30 137.1 224 42.0
BcaC09g48864 Brassica carinata HOM05D003728 ORTHO05D000006 2.1e-29 133.3 245 37.6
BcaC02g08048 Brassica carinata HOM05D003728 ORTHO05D000006 3.6e-29 132.5 184 46.2
BolC6t37325H Brassica oleracea HOM05D003728 ORTHO05D000007 3.6e-29 132.5 200 38.5
C01p23390 Brassica napus HOM05D003728 ORTHO05D000007 3.0e-28 129.4 208 41.8
C09p23400 Brassica napus HOM05D003728 ORTHO05D000007 5.7e-27 125.2 154 46.1
BolC9t55258H Brassica oleracea HOM05D003728 ORTHO05D000007 5.7e-27 125.2 154 46.1
BcaC02g11663 Brassica carinata HOM05D003728 ORTHO05D000006 3.7e-26 122.5 170 44.1
BraA05t21368Z Brassica rapa HOM05D003728 ORTHO05D000007 3.7e-26 122.5 208 40.9
BcaC01g00393 Brassica carinata HOM05D003728 ORTHO05D000006 4.9e-26 122.1 220 39.1
BraA03t14694Z Brassica rapa HOM05D003728 ORTHO05D000007 4.9e-26 122.1 188 39.9
BcaB05g23977 Brassica carinata HOM05D003728 ORTHO05D000007 8.3e-26 121.3 153 45.1
BcaB01g06265 Brassica carinata HOM05D003728 ORTHO05D000007 1.4e-25 120.6 210 41.0
C03p44190 Brassica napus HOM05D003728 ORTHO05D000007 3.1e-25 119.4 203 39.9
BolC9t56668H Brassica oleracea HOM05D003728 ORTHO05D000007 7.0e-25 118.2 68 73.5
BraA03t13448Z Brassica rapa HOM05D021355 ORTHO05D018569 9.2e-25 117.9 187 40.1
A01p02260 Brassica napus HOM05D003728 ORTHO05D000007 3.5e-24 115.9 181 41.4
Thhalv10011433m.g Eutrema salsugineum HOM05D003728 ORTHO05D000007 3.5e-24 115.9 176 40.9
A10p04740 Brassica napus HOM05D003728 ORTHO05D000007 5.9e-24 115.2 165 42.4
BolC7t42245H Brassica oleracea HOM05D003728 ORTHO05D000007 5.9e-24 115.2 167 42.5
C05p51230 Brassica napus HOM05D003728 ORTHO05D032471 2.3e-23 113.2 194 38.1
C06p31500 Brassica napus HOM05D003728 ORTHO05D000007 2.3e-23 113.2 236 36.0
BcaB07g33355 Brassica carinata HOM05D003728 ORTHO05D000006 3.8e-23 112.5 197 41.6
A07p23900 Brassica napus HOM05D003728 ORTHO05D000007 5.0e-23 112.1 68 69.1
BolC4t21750H Brassica oleracea HOM05D003728 ORTHO05D000007 1.1e-22 110.9 158 39.9
BcaC05g25385 Brassica carinata HOM05D003728 ORTHO05D000007 1.5e-22 110.5 56 83.9
BraSC39t46218Z Brassica rapa HOM05D003728 ORTHO05D000007 2.5e-22 109.8 110 51.8
Sp4g06970 Schrenkiella parvula HOM05D000003 ORTHO05D000004 4.3e-22 109.0 110 50.9
C09p38280 Brassica napus HOM05D003728 ORTHO05D000007 1.2e-21 107.5 58 75.9
BolC2t11109H Brassica oleracea HOM05D003728 ORTHO05D000007 1.2e-21 107.5 169 43.2
C02p50280 Brassica napus HOM05D003728 ORTHO05D000007 2.1e-21 106.7 169 43.2
AL3G46190 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 3.6e-21 105.9 269 29.7
Carub.0002s1911 Capsella rubella HOM05D003728 ORTHO05D000007 8.0e-21 104.8 320 29.4
BolC8t48130H Brassica oleracea HOM05D003728 ORTHO05D000007 1.4e-20 104.0 133 44.4
A07p43330 Brassica napus HOM05D003728 ORTHO05D000007 1.8e-20 103.6 157 41.4
C06p11560 Brassica napus HOM05D003728 ORTHO05D031967 1.7e-18 97.1 168 38.7
BolC6t36289H Brassica oleracea HOM05D003728 ORTHO05D031967 3.7e-18 95.9 247 33.6
BcaC09g49458 Brassica carinata HOM05D001007 ORTHO05D002932 4.9e-18 95.5 138 44.2
BolC4t25951H Brassica oleracea HOM05D003728 ORTHO05D000007 4.9e-18 95.5 46 84.8
BraA10t44622Z Brassica rapa HOM05D000003 ORTHO05D000006 8.3e-18 94.7 228 33.8
BolC7t42317H Brassica oleracea HOM05D003728 ORTHO05D000007 2.4e-17 93.2 47 80.9
BcaC02g10692 Brassica carinata HOM05D002078 ORTHO05D032471 3.2e-17 92.8 176 35.8
BolC4t24135H Brassica oleracea HOM05D003728 ORTHO05D032471 3.2e-17 92.8 176 35.8
BraA04t15869Z Brassica rapa HOM05D003728 ORTHO05D000007 3.5e-16 89.4 190 37.4
AL481U10020 Arabidopsis lyrata HOM05D003728 ORTHO05D000007 5.9e-16 88.6 180 36.1
BcaC03g13626 Brassica carinata HOM05D003728 ORTHO05D000007 1.0e-15 87.8 64 59.4
BcaC08g44479 Brassica carinata HOM05D003728 ORTHO05D039199 1.7e-15 87.0 212 33.5
BraA07t29236Z Brassica rapa HOM05D003728 ORTHO05D000007 1.7e-15 87.0 170 39.4
BolC9t54510H Brassica oleracea HOM05D003728 ORTHO05D000007 3.9e-15 85.9 146 37.7
BolC4t22907H Brassica oleracea HOM05D003728 ORTHO05D000283 6.6e-15 85.1 146 40.4
BcaC09g50262 Brassica carinata HOM05D003728 ORTHO05D000007 1.5e-14 84.0 213 33.3
BcaC07g38505 Brassica carinata HOM05D003728 ORTHO05D000007 1.9e-14 83.6 210 32.9
BolC4t26609H Brassica oleracea HOM05D003728 ORTHO05D000007 3.3e-14 82.8 261 29.9
BcaB08g35267 Brassica carinata HOM05D003728 ORTHO05D000007 7.3e-14 81.6 127 39.4
BraA01t02722Z Brassica rapa HOM05D003421 ORTHO05D003268 7.3e-14 81.6 46 76.1
C05p47490 Brassica napus HOM05D003728 ORTHO05D000007 1.6e-13 80.5 46 67.4
BolC8t49721H Brassica oleracea HOM05D003728 ORTHO05D000007 1.6e-13 80.5 131 38.9
BraA07t31313Z Brassica rapa HOM05D003728 ORTHO05D000007 2.8e-13 79.7 136 40.4
BcaC06g36482 Brassica carinata HOM05D003728 ORTHO05D000006 6.2e-13 78.6 72 52.8
BolC1t03150H Brassica oleracea HOM05D003728 ORTHO05D000007 8.0e-13 78.2 131 38.2
BcaC01g03492 Brassica carinata HOM05D014043 ORTHO05D016085 1.4e-12 77.4 68 52.9
BcaB05g21836 Brassica carinata HOM05D003728 ORTHO05D000006 2.3e-12 76.6 63 55.6
BcaC05g24862 Brassica carinata HOM05D014043 ORTHO05D016085 4.0e-12 75.9 163 33.7
BolC1t00860H Brassica oleracea HOM05D003728 ORTHO05D000007 5.2e-12 75.5 119 39.5
BolC5t30620H Brassica oleracea HOM05D003728 ORTHO05D000007 6.8e-12 75.1 160 36.9
BraA09t40138Z Brassica rapa HOM05D014043 ORTHO05D016085 8.9e-12 74.7 164 33.5
BcaB03g14753 Brassica carinata HOM05D003728 ORTHO05D000007 1.2e-11 74.3 61 52.5
BraA10t42886Z Brassica rapa HOM05D003728 ORTHO05D000007 2.0e-11 73.6 253 31.2
BolC8t48660H Brassica oleracea HOM05D003728 ORTHO05D000007 1.7e-10 70.5 76 43.4
BcaC05g25967 Brassica carinata HOM05D003728 ORTHO05D000006 3.7e-10 69.3 35 82.9
BolC2t06926H Brassica oleracea HOM05D003728 ORTHO05D000007 4.9e-10 68.9 42 59.5
BolC7t43262H Brassica oleracea HOM05D003728 ORTHO05D000007 4.9e-10 68.9 76 47.4
Aa31LG3G3110 Aethionema arabicum HOM05D000848 ORTHO05D000007 1.1e-09 67.8 155 33.5
A06p30230 Brassica napus HOM05D000848 ORTHO05D027437 2.4e-09 66.6 60 46.7
BcaB02g10624 Brassica carinata HOM05D000003 ORTHO05D000006 7.0e-09 65.1 155 27.1
BraA03t15318Z Brassica rapa HOM05D003728 ORTHO05D000007 1.2e-08 64.3 180 30.6
BcaC04g21229 Brassica carinata HOM05D003728 ORTHO05D000007 2.0e-08 63.5 172 28.5
C09p34120 Brassica napus HOM05D000848 ORTHO05D000007 2.0e-08 63.5 172 28.5
BolC9t56249H Brassica oleracea HOM05D003728 ORTHO05D000007 2.0e-08 63.5 172 28.5
BcaB01g01827 Brassica carinata HOM05D003728 ORTHO05D000006 2.7e-08 63.2 58 44.8
BolC9t57976H Brassica oleracea HOM05D000848 ORTHO05D000007 3.5e-08 62.8 150 32.7
BolC4t25165H Brassica oleracea HOM05D021539 ORTHO05D000283 7.8e-08 61.6 95 40.0
BolC3t19443H Brassica oleracea HOM05D003728 ORTHO05D000007 2.3e-07 60.1 187 28.3
BcaC07g37224 Brassica carinata HOM05D003728 ORTHO05D000007 1.9e-06 57.0 203 30.5
BcaC07g38080 Brassica carinata HOM05D003728 ORTHO05D000006 2.5e-06 56.6 160 33.1
BcaC01g06647 Brassica carinata HOM05D025884 ORTHO05D000007 3.3e-06 56.2 140 29.3


User provided reference genes

Program Settings