Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 6.8e-120 434.5 279 100.0
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 6.8e-120 434.5 279 100.0
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 6.2e-113 411.4 279 87.5
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 2.9e-102 375.9 241 91.3
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 2.2e-94 349.7 240 87.5
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 5.8e-87 325.1 290 75.2
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 1.1e-82 310.8 289 74.4
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 4.8e-81 305.4 280 62.5
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 3.7e-73 279.3 239 76.6
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 7.6e-71 271.6 233 69.5
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 3.2e-69 266.2 246 72.4
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 3.0e-67 259.6 226 64.6
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 2.8e-65 253.1 292 54.8
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 2.8e-49 199.9 297 44.4
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 8.2e-49 198.4 246 45.1
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 9.1e-48 194.9 253 47.8
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 1.5e-47 194.1 297 44.1
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 1.0e-46 191.4 253 49.8
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 8.5e-46 188.3 253 55.7
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 1.1e-45 188.0 178 53.4
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.1e-45 188.0 245 56.3
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 2.5e-45 186.8 253 55.7
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 3.2e-45 186.4 296 41.9
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 3.2e-45 186.4 309 46.0
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 1.2e-44 184.5 238 42.4
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 1.6e-44 184.1 250 48.0
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 1.6e-44 184.1 235 45.5
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 1.6e-44 184.1 273 42.9
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 2.1e-44 183.7 260 43.1
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 3.6e-44 183.0 300 46.7
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 4.7e-44 182.6 262 42.7
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 6.1e-44 182.2 247 42.5
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 1.4e-43 181.0 234 42.3
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 2.3e-43 180.3 249 49.4
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 2.3e-43 180.3 249 49.4
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 3.0e-43 179.9 259 39.8
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 3.0e-43 179.9 271 43.9
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 5.1e-43 179.1 299 44.8
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 5.1e-43 179.1 249 42.2
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 6.7e-43 178.7 246 40.2
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 6.7e-43 178.7 256 50.8
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 1.1e-42 177.9 200 45.0
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 1.1e-42 177.9 299 40.1
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 3.3e-42 176.4 256 49.6
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 5.7e-42 175.6 241 47.3
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 7.4e-42 175.3 244 40.6
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 7.4e-42 175.3 263 46.0
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 9.7e-42 174.9 256 41.4
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 2.2e-41 173.7 174 53.4
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 8.2e-41 171.8 263 41.8
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 2.4e-40 170.2 180 47.2
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 4.1e-40 169.5 266 39.1
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 4.1e-40 169.5 258 50.4
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 9.1e-40 168.3 321 37.7
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 1.5e-39 167.5 281 39.5
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 2.6e-39 166.8 265 40.4
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 3.5e-39 166.4 242 38.8
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 3.5e-39 166.4 296 42.6
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 1.0e-38 164.9 187 43.9
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 1.0e-38 164.9 313 39.0
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 2.2e-38 163.7 248 42.7
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 2.9e-38 163.3 309 43.7
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 2.5e-37 160.2 188 45.7
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 4.2e-37 159.5 279 34.8
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 4.2e-37 159.5 239 45.6
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 9.4e-37 158.3 187 43.3
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 1.2e-36 157.9 328 33.2
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 2.1e-36 157.1 193 43.5
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 2.7e-36 156.8 265 46.4
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 6.1e-36 155.6 178 48.9
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 1.8e-35 154.1 265 37.7
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 1.5e-34 151.0 254 51.2
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 3.3e-34 149.8 281 34.9
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 3.3e-34 149.8 262 46.2
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 4.4e-34 149.4 253 51.4
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 9.7e-34 148.3 258 49.2
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 1.7e-33 147.5 304 39.1
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 3.1e-32 143.3 305 35.4
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 2.0e-31 140.6 287 43.9
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 1.7e-30 137.5 288 34.4
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 2.9e-30 136.7 302 43.7
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 6.5e-30 135.6 291 47.1
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 7.2e-29 132.1 309 32.4
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 1.6e-28 131.0 111 54.1
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 4.0e-27 126.3 165 44.8
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 7.5e-26 122.1 163 44.8
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 1.3e-25 121.3 311 32.5
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 4.1e-24 116.3 126 50.0
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 2.7e-23 113.6 203 36.0
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 1.1e-21 108.2 331 29.3
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 8.0e-20 102.1 259 30.5
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 1.2e-18 98.2 201 32.8
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.4e-16 91.3 167 52.7
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 1.5e-13 81.3 105 40.0
Pp3c14_13390 Physcomitrium patens HOM05D007444 ORTHO05D009359 8.0e-12 75.5 121 34.7
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 1.4e-11 74.7 112 38.4
BcaC02g12249 Brassica carinata HOM05D007444 ORTHO05D009359 9.8e-10 68.6 38 76.3
Mapoly0028s0047 Marchantia polymorpha HOM05D007444 ORTHO05D009359 2.7e-07 60.5 150 30.0


User provided reference genes

Program Settings