Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p53410 Brassica napus HOM05D006370 ORTHO05D008324 5.2e-63 244.2 122 100.0
BolC5t34010H Brassica oleracea HOM05D006370 ORTHO05D008324 6.3e-61 237.3 122 97.5
BolC5t34018H Brassica oleracea HOM05D006370 ORTHO05D008324 6.3e-61 237.3 122 97.5
BcaC05g29112 Brassica carinata HOM05D006370 ORTHO05D008324 1.5e-54 216.1 110 99.1
BcaC02g09577 Brassica carinata HOM05D006370 ORTHO05D008324 9.2e-36 153.7 115 79.1
BolC4t26007H Brassica oleracea HOM05D006370 ORTHO05D008324 9.2e-36 153.7 115 79.1
A04p10640 Brassica napus HOM05D006370 ORTHO05D008324 1.6e-35 152.9 115 76.5
C04p44360 Brassica napus HOM05D006370 ORTHO05D008324 1.7e-34 149.4 114 77.2
BcaB06g27082 Brassica carinata HOM05D006370 ORTHO05D008324 6.6e-34 147.5 115 73.9
Sp7g04690 Schrenkiella parvula HOM05D006370 ORTHO05D008324 1.3e-29 133.3 112 64.3
AT5G37480 Arabidopsis thaliana HOM05D006370 ORTHO05D008324 1.1e-23 113.6 104 60.6
Thhalv10028111m.g Eutrema salsugineum HOM05D006370 ORTHO05D008324 1.8e-23 112.8 90 64.4
Carub.0007s3265 Capsella rubella HOM05D006370 ORTHO05D008324 2.4e-20 102.4 103 57.3
CARHR215460 Cardamine hirsuta HOM05D006370 ORTHO05D008324 5.4e-20 101.3 105 55.2
Aa31LG9G17570 Aethionema arabicum HOM05D006370 ORTHO05D008324 9.3e-20 100.5 111 56.8
THA.LOC104800403 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 1.7e-18 96.3 108 50.0
THA.LOC104800075 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 3.0e-18 95.5 108 49.1
THA.LOC104823775 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 1.9e-17 92.8 102 52.9
Duzib177G0489 Durio zibethinus HOM05D006370 ORTHO05D008324 2.8e-16 89.0 93 55.9
PGR142G0714 Punica granatum HOM05D006370 ORTHO05D008324 2.8e-16 89.0 100 51.0
Cfa017718 Carpinus fangiana HOM05D006370 ORTHO05D008324 3.1e-15 85.5 87 51.7
Duzib128G1808 Durio zibethinus HOM05D006370 ORTHO05D008324 4.0e-15 85.1 93 54.8
COL.COLO4_28633 Corchorus olitorius HOM05D006370 ORTHO05D008324 5.3e-15 84.7 85 55.3
Gohir.D11G241500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 5.3e-15 84.7 87 54.0
Gorai.007G255600 Gossypium raimondii HOM05D006370 ORTHO05D008324 5.3e-15 84.7 87 54.0
Thecc.05G242700 Theobroma cacao HOM05D006370 ORTHO05D008324 5.3e-15 84.7 88 54.5
Aqoxy1G00517 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 6.9e-15 84.3 103 47.6
Gohir.A11G229500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 1.5e-14 83.2 87 54.0
Haze_20411 Corylus avellana HOM05D006370 ORTHO05D008324 4.5e-14 81.6 94 48.9
MD12G1010600 Malus domestica HOM05D006370 ORTHO05D008324 7.6e-14 80.9 84 53.6
Lsat_1_v5_gn_1_55401 Lactuca sativa HOM05D006370 ORTHO05D008324 9.9e-14 80.5 84 52.4
Prupe.7G012600 Prunus persica HOM05D006370 ORTHO05D008324 1.3e-13 80.1 79 54.4
Atru.chr2.1510 Acer truncatum HOM05D006370 ORTHO05D008324 2.9e-13 79.0 77 53.2
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 2.9e-13 79.0 77 51.9
Nn2g14550 Nelumbo nucifera HOM05D006370 ORTHO05D008324 1.1e-12 77.0 82 51.2
Sc07g0007490 Simmondsia chinensis HOM05D006370 ORTHO05D008324 1.1e-12 77.0 81 53.1
Zm00001eb057190 Zea mays HOM05D006370 ORTHO05D008324 1.1e-12 77.0 87 48.3
CDE10G0775 Ceratophyllum demersum HOM05D006370 ORTHO05D008324 1.9e-12 76.3 66 54.5
PSO063G0933 Papaver somniferum HOM05D006370 ORTHO05D008324 1.9e-12 76.3 77 53.2
MD14G1007700 Malus domestica HOM05D006370 ORTHO05D008324 2.4e-12 75.9 59 62.7
TWI34G0169 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 2.4e-12 75.9 92 52.2
AUR62042155 Chenopodium quinoa HOM05D006370 ORTHO05D008324 3.2e-12 75.5 100 46.0
Hma1.2p1_0526F.1_g172840 Hydrangea macrophylla HOM05D006370 ORTHO05D008324 3.2e-12 75.5 77 51.9
Ciclev10022640m.g Citrus clementina HOM05D006370 ORTHO05D008324 5.4e-12 74.7 83 49.4
FvH4_1g28570 Fragaria vesca HOM05D006370 ORTHO05D008324 5.4e-12 74.7 83 53.0
FAN19G0680 Fragaria x ananassa HOM05D006370 ORTHO05D008324 5.4e-12 74.7 83 53.0
FAN26G3131 Fragaria x ananassa HOM05D006370 ORTHO05D008324 5.4e-12 74.7 83 53.0
TWI60G1203 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 5.4e-12 74.7 106 45.3
Eucgr.K01528 Eucalyptus grandis HOM05D006370 ORTHO05D008324 7.1e-12 74.3 89 48.3
HanXRQChr01g0026941 Helianthus annuus HOM05D006370 ORTHO05D008324 7.1e-12 74.3 81 51.9
PSO339G2906 Papaver somniferum HOM05D006370 ORTHO05D008324 7.1e-12 74.3 83 49.4
EL10Ac5g11708 Beta vulgaris HOM05D006370 ORTHO05D008324 9.3e-12 73.9 86 46.5
CiPaw.09G166900 Carya illinoinensis HOM05D006370 ORTHO05D008324 1.2e-11 73.6 96 46.9
AUR62043361 Chenopodium quinoa HOM05D006370 ORTHO05D008324 1.2e-11 73.6 83 48.2
Dinv25046 Davidia involucrata HOM05D006370 ORTHO05D008324 1.2e-11 73.6 109 41.3
TAR623G1163 Trochodendron aralioides HOM05D006370 ORTHO05D008324 1.2e-11 73.6 110 40.0
ECA248G1067 Erigeron canadensis HOM05D006370 ORTHO05D008324 2.7e-11 72.4 100 44.0
TAR633G0247 Trochodendron aralioides HOM05D001480 ORTHO05D001331 2.7e-11 72.4 92 47.8
Actinidia37817 Actinidia chinensis HOM05D006370 ORTHO05D008324 6.0e-11 71.2 98 46.9
FAN28G0334 Fragaria x ananassa HOM05D006370 ORTHO05D008324 6.0e-11 71.2 83 51.8
Manes.09G136900 Manihot esculenta HOM05D006370 ORTHO05D008324 6.0e-11 71.2 108 44.4
Sabra13G0056900 Salix brachista HOM05D006370 ORTHO05D008324 6.0e-11 71.2 62 59.7
Dinv05555 Davidia involucrata HOM05D006370 ORTHO05D008324 1.0e-10 70.5 79 51.9
Eucgr.K01533 Eucalyptus grandis HOM05D006370 ORTHO05D008324 1.0e-10 70.5 91 45.1
GSVIVG01022435001 Vitis vinifera HOM05D006370 ORTHO05D008324 1.0e-10 70.5 76 51.3
Lj1A1073T41 Lonicera japonica HOM05D006370 ORTHO05D008324 1.3e-10 70.1 99 48.5
Sabra13G0057100 Salix brachista HOM05D006370 ORTHO05D008324 1.3e-10 70.1 62 58.1
Potri.013G065200 Populus trichocarpa HOM05D006370 ORTHO05D008324 1.8e-10 69.7 61 59.0
MSTRG.6248 Avicennia marina HOM05D006370 ORTHO05D008324 2.3e-10 69.3 81 51.9
CANSAT01G3230 Cannabis sativa HOM05D006370 ORTHO05D008324 2.3e-10 69.3 96 49.0
HPP92_022911 Vanilla planifolia HOM05D006370 ORTHO05D008324 2.3e-10 69.3 86 44.2
Os03g0748600 Oryza sativa ssp. japonica HOM05D006370 ORTHO05D008324 3.9e-10 68.6 67 47.8
Aqoxy1G00515 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 6.7e-10 67.8 70 50.0
Aqoxy1G00516 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 6.7e-10 67.8 70 51.4
Cpa.g.sc161.33 Carica papaya HOM05D006370 ORTHO05D008324 6.7e-10 67.8 99 44.4
Phvul.004G050600 Phaseolus vulgaris HOM05D006370 ORTHO05D008324 6.7e-10 67.8 108 40.7
Rhsim03G0049800 Rhododendron simsii HOM05D006370 ORTHO05D008324 6.7e-10 67.8 80 51.2
Mapoly0066s0112 Marchantia polymorpha HOM05D006370 ORTHO05D008324 1.1e-09 67.0 86 43.0
Lalb_Chr06g0174141 Lupinus albus HOM05D006370 ORTHO05D008324 1.9e-09 66.2 78 47.4
Lj2g0006862 Lotus japonicus HOM05D006370 ORTHO05D008324 2.5e-09 65.9 128 39.8
SEGI_24903 Sequoiadendron giganteum HOM05D006370 ORTHO05D008324 2.5e-09 65.9 80 47.5
Cc10_g11540 Coffea canephora HOM05D006370 ORTHO05D008324 3.3e-09 65.5 89 46.1
vmacro07654 Vaccinium macrocarpon HOM05D006370 ORTHO05D008324 7.4e-09 64.3 62 56.5
RcHm_v2.0_Chr3g0496161 Rosa chinensis HOM05D006370 ORTHO05D008324 1.3e-08 63.5 80 48.8
Solyc10g081480.2 Solanum lycopersicum HOM05D006370 ORTHO05D008324 2.8e-08 62.4 93 37.6
Medtr6g027600 Medicago truncatula HOM05D006370 ORTHO05D008324 4.8e-08 61.6 88 42.0
PGSC0003DMG400028217 Solanum tuberosum HOM05D006370 ORTHO05D008324 4.8e-08 61.6 94 37.2
Glyma.19G010300 Glycine max HOM05D006370 ORTHO05D008324 6.2e-08 61.2 70 47.1
Sopen10g031990 Solanum pennellii HOM05D006370 ORTHO05D008324 1.1e-07 60.5 65 47.7
VMungo0540G0157 Vigna mungo HOM05D006370 ORTHO05D008324 1.1e-07 60.5 76 43.4
arahy.Tifrunner.gnm1.ann1.AZ5GA5 Arachis hypogaea HOM05D006370 ORTHO05D008324 1.4e-07 60.1 118 39.0
Nitab4.5_0000613g0010 Nicotiana tabacum HOM05D006370 ORTHO05D008324 1.4e-07 60.1 94 38.3
arahy.Tifrunner.gnm1.ann1.ZL000T Arachis hypogaea HOM05D006370 ORTHO05D008324 1.8e-07 59.7 111 40.5
Glyma.13G170200 Glycine max HOM05D006370 ORTHO05D008324 1.8e-07 59.7 80 46.2
unitig_744.g24144 Utricularia gibba HOM05D006370 ORTHO05D000703 2.4e-07 59.3 95 40.0
Mapoly0007s0154 Marchantia polymorpha HOM05D006370 ORTHO05D008324 3.1e-07 58.9 74 44.6
SMO196G0263 Selaginella moellendorffii HOM05D006370 ORTHO05D008324 4.0e-07 58.5 74 45.9
Migut.J01529 Erythranthe guttata HOM05D006370 ORTHO05D008324 1.2e-06 57.0 91 44.0
Pp3c22_7490 Physcomitrium patens HOM05D006370 ORTHO05D008324 2.6e-06 55.8 84 36.9
SalBow6G1190 Salvia bowleyana HOM05D006370 ORTHO05D008324 2.6e-06 55.8 103 35.9
Psat1g089760 Pisum sativum HOM05D006370 ORTHO05D008324 4.5e-06 55.1 77 40.3
SalBow4G2194 Salvia bowleyana HOM05D006370 ORTHO05D008324 5.8e-06 54.7 93 38.7
SalBow6G3000 Salvia bowleyana HOM05D006370 ORTHO05D008324 5.8e-06 54.7 93 38.7


User provided reference genes

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